Literature DB >> 26313337

First Principles Calculations of Aqueous pKa Values for Organic and Inorganic Acids Using COSMO-RS Reveal an Inconsistency in the Slope of the pKa Scale.

Andreas Klamt1,2, Frank Eckert1,2, Michael Diedenhofen1,2, Michael E Beck1,2.   

Abstract

The COSMO-RS method, a combination of the quantum chemical dielectric continuum solvation model COSMO with a statistical thermodynamics treatment for more realistic solvation (RS) simulations, has been used for the direct prediction of pKa constants of a large variety of 64 organic and inorganic acids. A highly significant correlation of r(2) = 0.984 with a standard deviation of only 0.49 between the calculated values of the free energies of dissociation and the experimental pKa values was found, without any special adjustment of the method. Thus, we have a theoretical a priori prediction method for pKa, which has the regression constant and the slope as only adjusted parameters. Such a method can be of great value in many areas of physical chemistry, especially in pharmaceutical and agrochemical industry. To our surprise, the slope of pKa vs ΔGdiss is only 58% of the theoretically expected value of 1/RTln(10). A careful analysis with respect to different contributions as well as a comparison with the work of other authors excludes the possibility that the discrepancy is due to weaknesses of the calculation method. Hence, we must conclude that the experimental pKa scale depends differently on the free energy of dissociation than generally assumed.

Entities:  

Year:  2003        PMID: 26313337     DOI: 10.1021/jp034688o

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  33 in total

1.  First-principles calculation of pKa for cocaine, nicotine, neurotransmitters, and anilines in aqueous solution.

Authors:  Haiting Lu; Xi Chen; Chang-Guo Zhan
Journal:  J Phys Chem B       Date:  2007-08-11       Impact factor: 2.991

2.  A theoretical study on the gas-phase protonation of pyridine and phosphinine derivatives.

Authors:  François Zielinski; Vincent Tognetti; Laurent Joubert
Journal:  J Mol Model       Date:  2013-07-28       Impact factor: 1.810

3.  Correlations between the 1H NMR chemical shieldings and the pKa values of organic acids and amines.

Authors:  Juanfeng Lu; Tingting Lu; Xinyun Zhao; Xi Chen; Chang-Guo Zhan
Journal:  J Mol Model       Date:  2018-06-01       Impact factor: 1.810

4.  Molecular acidity: A quantitative conceptual density functional theory description.

Authors:  Shubin Liu; Cynthia K Schauer; Lee G Pedersen
Journal:  J Chem Phys       Date:  2009-10-28       Impact factor: 3.488

5.  Biorelevant pK(a) (37 °C) predicted from the 2D structure of the molecule and its pK(a) at 25 °C.

Authors:  Na Sun; Alex Avdeef
Journal:  J Pharm Biomed Anal       Date:  2011-05-17       Impact factor: 3.935

6.  Prediction of the Fate of Organic Compounds in the Environment From Their Molecular Properties: A Review.

Authors:  Laure Mamy; Dominique Patureau; Enrique Barriuso; Carole Bedos; Fabienne Bessac; Xavier Louchart; Fabrice Martin-Laurent; Cecile Miege; Pierre Benoit
Journal:  Crit Rev Environ Sci Technol       Date:  2015-06-18       Impact factor: 12.561

7.  Correlation between molecular acidity (pKa) and vibrational spectroscopy.

Authors:  Niraj Verma; Yunwen Tao; Bruna Luana Marcial; Elfi Kraka
Journal:  J Mol Model       Date:  2019-01-30       Impact factor: 1.810

8.  The SAMPL6 challenge on predicting aqueous pKa values from EC-RISM theory.

Authors:  Nicolas Tielker; Lukas Eberlein; Stefan Güssregen; Stefan M Kast
Journal:  J Comput Aided Mol Des       Date:  2018-08-02       Impact factor: 3.686

9.  High accuracy quantum-chemistry-based calculation and blind prediction of macroscopic pKa values in the context of the SAMPL6 challenge.

Authors:  Philipp Pracht; Rainer Wilcken; Anikó Udvarhelyi; Stephane Rodde; Stefan Grimme
Journal:  J Comput Aided Mol Des       Date:  2018-08-23       Impact factor: 3.686

10.  An explicit-solvent hybrid QM and MM approach for predicting pKa of small molecules in SAMPL6 challenge.

Authors:  Samarjeet Prasad; Jing Huang; Qiao Zeng; Bernard R Brooks
Journal:  J Comput Aided Mol Des       Date:  2018-10-01       Impact factor: 3.686

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