Literature DB >> 26305576

Nanopore-based electrical and label-free sensing of enzyme activity in blood serum.

Mikiembo Kukwikila1,2, Stefan Howorka1.   

Abstract

A generic strategy to expand the analytical scope of electrical nanopore sensing is presented. We specifically and electrically detect the activity of a diagnostically relevant hydrolytic enzyme and remove the analytically harmful interference from the biochemically complex sample matrix of blood serum. Our strategy is demonstrated at the example of the renin protease which is involved in regulation of blood pressure. The analysis scheme exploits a new approach to reduce sample complexity while generating a specific read-out signal. Within a single spin-column (i), the protease cleaves a resin-tethered peptide substrate (ii) which is affinity-purified using the same multifunctional resin to remove interfering blood serum components, followed by (iii) detecting the peptide via electrical nanopore recordings. Our approach is beneficial in several ways. First, by eliminating serum components, we overcome limitations of nanopore sensing when challenging samples lead to membrane instability and a poor signal-to-noise ratio. Second, the label-free sensing avoids drawbacks of currently used radiolabel-immunoassays for renin. Finally, the strategy of simultaneous generation and purification of a signal peptide within a multifunctional resin can very likely be expanded to other hydrolytic enzymes dissolved in any analyte matrix and exploited for analytical read-out methods other than nanopore sensing.

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Year:  2015        PMID: 26305576     DOI: 10.1021/acs.analchem.5b01764

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  11 in total

1.  A Nanopore Approach for Analysis of Caspase-7 Activity in Cell Lysates.

Authors:  Bach Pham; Scott J Eron; Maureen E Hill; Xin Li; Monifa A Fahie; Jeanne A Hardy; Min Chen
Journal:  Biophys J       Date:  2019-08-02       Impact factor: 4.033

Review 2.  Nanopore Sensing.

Authors:  Wenqing Shi; Alicia K Friedman; Lane A Baker
Journal:  Anal Chem       Date:  2016-11-18       Impact factor: 6.986

3.  Label-free nanopore single-molecule measurement of trypsin activity.

Authors:  Shuo Zhou; Liang Wang; Xiaohan Chen; Xiyun Guan
Journal:  ACS Sens       Date:  2016-03-24       Impact factor: 7.711

4.  Simple and Versatile Detection of Viruses Using Anodized Alumina Membranes.

Authors:  Pavan Chaturvedi; Stacy D Rodriguez; Ivan Vlassiouk; Immo A Hansen; Sergei N Smirnov
Journal:  ACS Sens       Date:  2016-03-08       Impact factor: 7.711

5.  Single-Molecule Protein Detection in a Biofluid Using a Quantitative Nanopore Sensor.

Authors:  Avinash Kumar Thakur; Liviu Movileanu
Journal:  ACS Sens       Date:  2019-08-21       Impact factor: 7.711

6.  Displacement chemistry-based nanopore analysis of nucleic acids in complicated matrices.

Authors:  Liang Wang; Xiaohan Chen; Shuo Zhou; Golbarg M Roozbahani; Youwen Zhang; Deqiang Wang; Xiyun Guan
Journal:  Chem Commun (Camb)       Date:  2018-12-11       Impact factor: 6.222

Review 7.  Recent advances in integrated solid-state nanopore sensors.

Authors:  Mahmudur Rahman; Mohammad Julker Neyen Sampad; Aaron Hawkins; Holger Schmidt
Journal:  Lab Chip       Date:  2021-06-17       Impact factor: 7.517

8.  β-Barrel Nanopores with an Acidic-Aromatic Sensing Region Identify Proteinogenic Peptides at Low pH.

Authors:  Roderick Corstiaan Abraham Versloot; Sabine Angenieta Paulina Straathof; Gemma Stouwie; Matthijs Jonathan Tadema; Giovanni Maglia
Journal:  ACS Nano       Date:  2022-03-18       Impact factor: 18.027

9.  Identification of single amino acid differences in uniformly charged homopolymeric peptides with aerolysin nanopore.

Authors:  Fabien Piguet; Hadjer Ouldali; Manuela Pastoriza-Gallego; Philippe Manivet; Juan Pelta; Abdelghani Oukhaled
Journal:  Nat Commun       Date:  2018-03-06       Impact factor: 14.919

10.  Nanobiosensors in diagnostics.

Authors:  Alejandro Chamorro-Garcia; Arben Merkoçi
Journal:  Nanobiomedicine (Rij)       Date:  2016-11-24
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