Literature DB >> 26303895

Design, synthesis, pharmacological characterization of a fluorescent agonist of the P2Y₁₄ receptor.

Evgeny Kiselev1, Ramachandran Balasubramanian1, Elisa Uliassi1, Kyle A Brown2, Kevin Trujillo1, Vsevolod Katritch3, Eva Hammes1, Raymond C Stevens4, T Kendall Harden2, Kenneth A Jacobson5.   

Abstract

The P2Y14R is a G(i/o)-coupled receptor of the P2Y family of purinergic receptors that is activated by extracellular UDP and UDP-glucose (UDPG). In an earlier report we described a P2Y14R fluorescent probe, MRS4174, based on the potent and selective antagonist PPTN, a naphthoic acid derivative. Here, we report the design, preparation, and activity of an agonist-based fluorescent probe MRS4183 (11) and a shorter P2Y14R agonist congener, which contain a UDP-glucuronic acid pharmacophore and BODIPY fluorophores conjugated through diaminoalkyl linkers. The design relied on both docking in a P2Y14R homology model and established structure activity relationship (SAR) of nucleotide analogs. 11 retained P2Y14R potency with EC50 value of 0.96 nM (inhibition of adenylyl cyclase), compared to parent UDPG (EC50 47 nM) and served as a tracer for microscopy and flow cytometry, displaying minimal nonspecific binding. Binding saturation analysis gave an apparent binding constant for 11 in whole cells of 21.4±1.1 nM, with a t1/2 of association at 50 nM 11 of 23.9 min. Known P2Y14R agonists and PPTN inhibited cell binding of 11 with the expected rank order of potency. The success in the identification of a new P2Y14R fluorescent agonist with low nonspecific binding illustrates the advantages of rational design based on recently determined GPCR X-ray structures. Such conjugates will be useful tools in expanding the SAR of this receptor, which still lacks chemical diversity in its collective ligands. Published by Elsevier Ltd.

Entities:  

Keywords:  Docking; G protein-coupled receptor; Homology modeling; Nucleotides; P2Y receptor; Pyrimidines

Mesh:

Substances:

Year:  2015        PMID: 26303895      PMCID: PMC4607650          DOI: 10.1016/j.bmcl.2015.08.021

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  23 in total

1.  Multiple P2Y subtypes in spinal microglia are involved in neuropathic pain after peripheral nerve injury.

Authors:  Kimiko Kobayashi; Hiroki Yamanaka; Fujio Yanamoto; Masamichi Okubo; Koichi Noguchi
Journal:  Glia       Date:  2012-06-26       Impact factor: 7.452

2.  Pyrimidine ribonucleotides with enhanced selectivity as P2Y(6) receptor agonists: novel 4-alkyloxyimino, (S)-methanocarba, and 5'-triphosphate gamma-ester modifications.

Authors:  Hiroshi Maruoka; Matthew O Barrett; Hyojin Ko; Dilip K Tosh; Artem Melman; Lauren E Burianek; Ramachandran Balasubramanian; Barkin Berk; Stefano Costanzi; T Kendall Harden; Kenneth A Jacobson
Journal:  J Med Chem       Date:  2010-06-10       Impact factor: 7.446

3.  Applying the pro-drug approach to afford highly bioavailable antagonists of P2Y(14).

Authors:  Joël Robichaud; Jean-François Fournier; Sébastien Gagné; Jacques Yves Gauthier; Martine Hamel; Yongxin Han; Martin Hénault; Stacia Kargman; Jean-François Levesque; Yaël Mamane; Joseph Mancini; Nicolas Morin; Erin Mulrooney; Jin Wu; W Cameron Black
Journal:  Bioorg Med Chem Lett       Date:  2010-12-28       Impact factor: 2.823

4.  Structure of the human P2Y12 receptor in complex with an antithrombotic drug.

Authors:  Kaihua Zhang; Jin Zhang; Zhan-Guo Gao; Dandan Zhang; Lan Zhu; Gye Won Han; Steven M Moss; Silvia Paoletta; Evgeny Kiselev; Weizhen Lu; Gustavo Fenalti; Wenru Zhang; Christa E Müller; Huaiyu Yang; Hualiang Jiang; Vadim Cherezov; Vsevolod Katritch; Kenneth A Jacobson; Raymond C Stevens; Beili Wu; Qiang Zhao
Journal:  Nature       Date:  2014-03-23       Impact factor: 49.962

Review 5.  UDP-Sugars as Extracellular Signaling Molecules: Cellular and Physiologic Consequences of P2Y14 Receptor Activation.

Authors:  Eduardo R Lazarowski; T Kendall Harden
Journal:  Mol Pharmacol       Date:  2015-03-31       Impact factor: 4.436

6.  Molecular modeling of the human P2Y14 receptor: A template for structure-based design of selective agonist ligands.

Authors:  Kevin Trujillo; Silvia Paoletta; Evgeny Kiselev; Kenneth A Jacobson
Journal:  Bioorg Med Chem       Date:  2015-03-21       Impact factor: 3.641

7.  The UDP-sugar-sensing P2Y(14) receptor promotes Rho-mediated signaling and chemotaxis in human neutrophils.

Authors:  Juliana I Sesma; Silvia M Kreda; Natacha Steinckwich-Besancon; Hong Dang; Rafael García-Mata; T Kendall Harden; Eduardo R Lazarowski
Journal:  Am J Physiol Cell Physiol       Date:  2012-06-06       Impact factor: 4.249

8.  Human P2Y(14) receptor agonists: truncation of the hexose moiety of uridine-5'-diphosphoglucose and its replacement with alkyl and aryl groups.

Authors:  Arijit Das; Hyojin Ko; Lauren E Burianek; Matthew O Barrett; T Kendall Harden; Kenneth A Jacobson
Journal:  J Med Chem       Date:  2010-01-14       Impact factor: 7.446

9.  Enhanced potency of nucleotide-dendrimer conjugates as agonists of the P2Y14 receptor: multivalent effect in G protein-coupled receptor recognition.

Authors:  Arijit Das; Yixing Zhou; Andrei A Ivanov; Rhonda L Carter; T Kendall Harden; Kenneth A Jacobson
Journal:  Bioconjug Chem       Date:  2009-07-02       Impact factor: 4.774

10.  UDP-glucose acting at P2Y14 receptors is a mediator of mast cell degranulation.

Authors:  Zhan-Guo Gao; Yi Ding; Kenneth A Jacobson
Journal:  Biochem Pharmacol       Date:  2009-11-05       Impact factor: 5.858

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  5 in total

Review 1.  Medicinal chemistry of adenosine, P2Y and P2X receptors.

Authors:  Kenneth A Jacobson; Christa E Müller
Journal:  Neuropharmacology       Date:  2015-12-12       Impact factor: 5.250

2.  Breakthrough in GPCR Crystallography and Its Impact on Computer-Aided Drug Design.

Authors:  Antonella Ciancetta; Kenneth A Jacobson
Journal:  Methods Mol Biol       Date:  2018

3.  Yeast-based directed-evolution for high-throughput structural stabilization of G protein-coupled receptors (GPCRs).

Authors:  M Meltzer; T Zvagelsky; U Hadad; Niv Papo; Stanislav Engel
Journal:  Sci Rep       Date:  2022-05-23       Impact factor: 4.996

Review 4.  Purinergic Signaling: Impact of GPCR Structures on Rational Drug Design.

Authors:  Veronica Salmaso; Kenneth A Jacobson
Journal:  ChemMedChem       Date:  2020-09-18       Impact factor: 3.540

5.  Structure-Based Design of 3-(4-Aryl-1H-1,2,3-triazol-1-yl)-Biphenyl Derivatives as P2Y14 Receptor Antagonists.

Authors:  Anna Junker; Ramachandran Balasubramanian; Antonella Ciancetta; Elisa Uliassi; Evgeny Kiselev; Chiara Martiriggiano; Kevin Trujillo; Giorgi Mtchedlidze; Leah Birdwell; Kyle A Brown; T Kendall Harden; Kenneth A Jacobson
Journal:  J Med Chem       Date:  2016-06-22       Impact factor: 7.446

  5 in total

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