Literature DB >> 26302522

Single Anisotropic 3-D MR Image Upsampling via Overcomplete Dictionary Trained From In-Plane High Resolution Slices.

Yuanyuan Jia, Zhongshi He, Ali Gholipour, Simon K Warfield.   

Abstract

In magnetic resonance (MR), hardware limitation, scanning time, and patient comfort often result in the acquisition of anisotropic 3-D MR images. Enhancing image resolution is desired but has been very challenging in medical image processing. Super resolution reconstruction based on sparse representation and overcomplete dictionary has been lately employed to address this problem; however, these methods require extra training sets, which may not be always available. This paper proposes a novel single anisotropic 3-D MR image upsampling method via sparse representation and overcomplete dictionary that is trained from in-plane high resolution slices to upsample in the out-of-plane dimensions. The proposed method, therefore, does not require extra training sets. Abundant experiments, conducted on simulated and clinical brain MR images, show that the proposed method is more accurate than classical interpolation. When compared to a recent upsampling method based on the nonlocal means approach, the proposed method did not show improved results at low upsampling factors with simulated images, but generated comparable results with much better computational efficiency in clinical cases. Therefore, the proposed approach can be efficiently implemented and routinely used to upsample MR images in the out-of-planes views for radiologic assessment and postacquisition processing.

Entities:  

Mesh:

Year:  2015        PMID: 26302522      PMCID: PMC5243920          DOI: 10.1109/JBHI.2015.2470682

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  16 in total

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Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
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3.  Super-resolution methods in MRI: can they improve the trade-off between resolution, signal-to-noise ratio, and acquisition time?

Authors:  Esben Plenge; Dirk H J Poot; Monique Bernsen; Gyula Kotek; Gavin Houston; Piotr Wielopolski; Louise van der Weerd; Wiro J Niessen; Erik Meijering
Journal:  Magn Reson Med       Date:  2012-02-01       Impact factor: 4.668

4.  Robust super-resolution volume reconstruction from slice acquisitions: application to fetal brain MRI.

Authors:  Ali Gholipour; Judy A Estroff; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2010-06-07       Impact factor: 10.048

5.  Non-local MRI upsampling.

Authors:  José V Manjón; Pierrick Coupé; Antonio Buades; Vladimir Fonov; D Louis Collins; Montserrat Robles
Journal:  Med Image Anal       Date:  2010-06-04       Impact factor: 8.545

6.  Maximum a posteriori estimation of isotropic high-resolution volumetric MRI from orthogonal thick-slice scans.

Authors:  Ali Gholipour; Judy A Estroff; Mustafa Sahin; Sanjay P Prabhu; Simon K Warfield
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

7.  A super-resolution framework for 3-D high-resolution and high-contrast imaging using 2-D multislice MRI.

Authors:  Richard Z Shilling; Trevor Q Robbie; Timothée Bailloeul; Klaus Mewes; Russell M Mersereau; Marijn E Brummer
Journal:  IEEE Trans Med Imaging       Date:  2008-10-31       Impact factor: 10.048

8.  MRI upsampling using feature-based nonlocal means approach.

Authors:  Kourosh Jafari-Khouzani
Journal:  IEEE Trans Med Imaging       Date:  2014-06-12       Impact factor: 10.048

9.  Single-image super-resolution of brain MR images using overcomplete dictionaries.

Authors:  Andrea Rueda; Norberto Malpica; Eduardo Romero
Journal:  Med Image Anal       Date:  2012-10-05       Impact factor: 8.545

10.  Super-resolution reconstruction using cross-scale self-similarity in multi-slice MRI.

Authors:  Esben Plenge; Dirk H J Poot; Wiro J Niessen; Erik Meijering
Journal:  Med Image Comput Comput Assist Interv       Date:  2013
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  4 in total

1.  A New Sparse Representation Framework for Reconstruction of an Isotropic High Spatial Resolution MR Volume From Orthogonal Anisotropic Resolution Scans.

Authors:  Yuanyuan Jia; Ali Gholipour; Zhongshi He; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2017-01-23       Impact factor: 10.048

2.  Scan-Specific Generative Neural Network for MRI Super-Resolution Reconstruction.

Authors:  Yao Sui; Onur Afacan; Camilo Jaimes; Ali Gholipour; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2022-06-01       Impact factor: 11.037

3.  Deep learning-Based 3D inpainting of brain MR images.

Authors:  Seung Kwan Kang; Seong A Shin; Seongho Seo; Min Soo Byun; Dong Young Lee; Yu Kyeong Kim; Dong Soo Lee; Jae Sung Lee
Journal:  Sci Rep       Date:  2021-01-18       Impact factor: 4.379

4.  Development and evaluation of a high resolution 0.5mm isotropic T1-weighted template of the older adult brain.

Authors:  Mohammad Rakeen Niaz; Abdur Raquib Ridwan; Yingjuan Wu; David A Bennett; Konstantinos Arfanakis
Journal:  Neuroimage       Date:  2022-01-02       Impact factor: 6.556

  4 in total

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