Literature DB >> 20879305

Maximum a posteriori estimation of isotropic high-resolution volumetric MRI from orthogonal thick-slice scans.

Ali Gholipour1, Judy A Estroff, Mustafa Sahin, Sanjay P Prabhu, Simon K Warfield.   

Abstract

Thick-slice image acquisitions are sometimes inevitable in magnetic resonance imaging due to limitations posed by pulse sequence timing and signal-to-noise-ratio. The estimation of an isotropic high-resolution volume from thick-slice MRI scans is desired for improved image analysis and evaluation. In this article we formulate a maximum a posteriori (MAP) estimation algorithm for high-resolution volumetric MRI reconstruction. As compared to the previous techniques, this probabilistic formulation relies on a slice acquisition model and allows the incorporation of image priors. We focus on image priors based on image gradients and compare the developed MAP estimation approach to scattered data interpolation (SDI) and maximum likelihood reconstruction. The results indicate that the developed MAP estimation approach outperforms the SDI techniques and appropriate image priors may improve the volume estimation when the acquired thick-slice scans do not sufficiently sample the imaged volume. We also report applications in pediatric and fetal imaging.

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Year:  2010        PMID: 20879305      PMCID: PMC3776306          DOI: 10.1007/978-3-642-15745-5_14

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  MRI inter-slice reconstruction using super-resolution.

Authors:  H Greenspan; G Oz; N Kiryati; S Peled
Journal:  Magn Reson Imaging       Date:  2002-06       Impact factor: 2.546

2.  Fast and robust multiframe super resolution.

Authors:  Sina Farsiu; M Dirk Robinson; Michael Elad; Peyman Milanfar
Journal:  IEEE Trans Image Process       Date:  2004-10       Impact factor: 10.856

3.  Statistical performance analysis of super-resolution.

Authors:  Dirk Robinson; Peyman Milanfar
Journal:  IEEE Trans Image Process       Date:  2006-06       Impact factor: 10.856

4.  Registration-based approach for reconstruction of high-resolution in utero fetal MR brain images.

Authors:  Francois Rousseau; Orit A Glenn; Bistra Iordanova; Claudia Rodriguez-Carranza; Daniel B Vigneron; James A Barkovich; Colin Studholme
Journal:  Acad Radiol       Date:  2006-09       Impact factor: 3.173

5.  Design and construction of a realistic digital brain phantom.

Authors:  D L Collins; A P Zijdenbos; V Kollokian; J G Sled; N J Kabani; C J Holmes; A C Evans
Journal:  IEEE Trans Med Imaging       Date:  1998-06       Impact factor: 10.048

6.  Intersection based motion correction of multislice MRI for 3-D in utero fetal brain image formation.

Authors:  Kio Kim; Piotr A Habas; Francois Rousseau; Orit A Glenn; Anthony J Barkovich; Colin Studholme
Journal:  IEEE Trans Med Imaging       Date:  2009-09-09       Impact factor: 10.048

7.  MRI of moving subjects using multislice snapshot images with volume reconstruction (SVR): application to fetal, neonatal, and adult brain studies.

Authors:  Shuzhou Jiang; Hui Xue; Alan Glover; Mary Rutherford; Daniel Rueckert; Joseph V Hajnal
Journal:  IEEE Trans Med Imaging       Date:  2007-07       Impact factor: 10.048

  7 in total
  14 in total

1.  Super-resolution reconstruction in frequency, image, and wavelet domains to reduce through-plane partial voluming in MRI.

Authors:  Ali Gholipour; Onur Afacan; Iman Aganj; Benoit Scherrer; Sanjay P Prabhu; Mustafa Sahin; Simon K Warfield
Journal:  Med Phys       Date:  2015-12       Impact factor: 4.071

2.  Ameliorating slice gaps in multislice magnetic resonance images: an interpolation scheme.

Authors:  Nasser H Kashou; Mark A Smith; Cynthia J Roberts
Journal:  Int J Comput Assist Radiol Surg       Date:  2014-04-23       Impact factor: 2.924

3.  A New Sparse Representation Framework for Reconstruction of an Isotropic High Spatial Resolution MR Volume From Orthogonal Anisotropic Resolution Scans.

Authors:  Yuanyuan Jia; Ali Gholipour; Zhongshi He; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2017-01-23       Impact factor: 10.048

4.  Motion-robust MRI through real-time motion tracking and retrospective super-resolution volume reconstruction.

Authors:  Ali Gholipour; Martin Polak; Andre van der Kouwe; Erez Nevo; Simon K Warfield
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2011

5.  Gradient-Guided Isotropic MRI Reconstruction from Anisotropic Acquisitions.

Authors:  Yao Sui; Onur Afacan; Camilo Jaimes; Ali Gholipour; Simon K Warfield
Journal:  IEEE Trans Comput Imaging       Date:  2021-11-17

6.  Reconstruction of high-resolution tongue volumes from MRI.

Authors:  Jonghye Woo; Emi Z Murano; Maureen Stone; Jerry L Prince
Journal:  IEEE Trans Biomed Eng       Date:  2012-09-27       Impact factor: 4.538

7.  Single Anisotropic 3-D MR Image Upsampling via Overcomplete Dictionary Trained From In-Plane High Resolution Slices.

Authors:  Yuanyuan Jia; Zhongshi He; Ali Gholipour; Simon K Warfield
Journal:  IEEE J Biomed Health Inform       Date:  2015-08-20       Impact factor: 5.772

8.  3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images.

Authors:  Benjamin Hou; Bishesh Khanal; Amir Alansary; Steven McDonagh; Alice Davidson; Mary Rutherford; Jo V Hajnal; Daniel Rueckert; Ben Glocker; Bernhard Kainz
Journal:  IEEE Trans Med Imaging       Date:  2018-02-19       Impact factor: 10.048

9.  Comparison of super resolution reconstruction acquisition geometries for use in mouse phenotyping.

Authors:  Niranchana Manivannan; Bradley D Clymer; Anna Bratasz; Kimerly A Powell
Journal:  Int J Biomed Imaging       Date:  2013-09-23

10.  Brain Gray Matter Deficits in Patients with Chronic Primary Insomnia.

Authors:  Eun Yeon Joo; Hyun Jin Noh; Jeong-Sik Kim; Dae Lim Koo; Daeyoung Kim; Kyoung Jin Hwang; Ji Young Kim; Sung Tae Kim; Mi Rim Kim; Seung Bong Hong
Journal:  Sleep       Date:  2013-07-01       Impact factor: 5.849

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