Literature DB >> 26295172

Taking the ruler to the jungle: single-molecule FRET for understanding biomolecular structure and dynamics in live cells.

Marko Sustarsic1, Achillefs N Kapanidis2.   

Abstract

Single-molecule Förster resonance energy transfer (smFRET) serves as a molecular ruler that is ideally posed to study static and dynamic heterogeneity in living cells. Observing smFRET in cells requires appropriately integrated labeling, internalization and imaging strategies, and significant progress has been made towards that goal. Pioneering studies have demonstrated smFRET detection in both prokaryotic and eukaryotic systems, using both wide-field and confocal microscopies, and have started to answer exciting biological questions. We anticipate that future technical developments will open the door to smFRET for the study of structure, conformational changes and kinetics of biomolecules in living cells.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26295172     DOI: 10.1016/j.sbi.2015.07.001

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  21 in total

Review 1.  Strategic labelling approaches for RNA single-molecule spectroscopy.

Authors:  Gerd Hanspach; Sven Trucks; Martin Hengesbach
Journal:  RNA Biol       Date:  2019-04-21       Impact factor: 4.652

2.  Accurate Transfer Efficiencies, Distance Distributions, and Ensembles of Unfolded and Intrinsically Disordered Proteins From Single-Molecule FRET.

Authors:  Erik D Holmstrom; Andrea Holla; Wenwei Zheng; Daniel Nettels; Robert B Best; Benjamin Schuler
Journal:  Methods Enzymol       Date:  2018-11-16       Impact factor: 1.600

Review 3.  Functions of intrinsic disorder in transmembrane proteins.

Authors:  Magnus Kjaergaard; Birthe B Kragelund
Journal:  Cell Mol Life Sci       Date:  2017-06-10       Impact factor: 9.261

Review 4.  Toward dynamic structural biology: Two decades of single-molecule Förster resonance energy transfer.

Authors:  Eitan Lerner; Thorben Cordes; Antonino Ingargiola; Yazan Alhadid; SangYoon Chung; Xavier Michalet; Shimon Weiss
Journal:  Science       Date:  2018-01-19       Impact factor: 47.728

5.  Preparation of Cell-free Synthesized Proteins Selectively Double Labeled for Single-molecule FRET Studies.

Authors:  Mayuri Sadoine; Michele Cerminara; Jörg Fitter; Alexandros Katranidis
Journal:  Bio Protoc       Date:  2018-06-20

6.  Single Molecules Are Your Quanta: A Bottom-Up Approach toward Multidimensional Super-resolution Microscopy.

Authors:  Limin Xiang; Kun Chen; Ke Xu
Journal:  ACS Nano       Date:  2021-07-26       Impact factor: 15.881

Review 7.  FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Authors:  Eitan Lerner; Anders Barth; Jelle Hendrix; Benjamin Ambrose; Victoria Birkedal; Scott C Blanchard; Richard Börner; Hoi Sung Chung; Thorben Cordes; Timothy D Craggs; Ashok A Deniz; Jiajie Diao; Jingyi Fei; Ruben L Gonzalez; Irina V Gopich; Taekjip Ha; Christian A Hanke; Gilad Haran; Nikos S Hatzakis; Sungchul Hohng; Seok-Cheol Hong; Thorsten Hugel; Antonino Ingargiola; Chirlmin Joo; Achillefs N Kapanidis; Harold D Kim; Ted Laurence; Nam Ki Lee; Tae-Hee Lee; Edward A Lemke; Emmanuel Margeat; Jens Michaelis; Xavier Michalet; Sua Myong; Daniel Nettels; Thomas-Otavio Peulen; Evelyn Ploetz; Yair Razvag; Nicole C Robb; Benjamin Schuler; Hamid Soleimaninejad; Chun Tang; Reza Vafabakhsh; Don C Lamb; Claus Am Seidel; Shimon Weiss
Journal:  Elife       Date:  2021-03-29       Impact factor: 8.140

8.  Single-molecule FRET imaging of GPCR dimers in living cells.

Authors:  Wesley B Asher; Peter Geggier; Michael D Holsey; Grant T Gilmore; Avik K Pati; Jozsef Meszaros; Daniel S Terry; Signe Mathiasen; Megan J Kaliszewski; Mitchell D McCauley; Alekhya Govindaraju; Zhou Zhou; Kaleeckal G Harikumar; Khuloud Jaqaman; Laurence J Miller; Adam W Smith; Scott C Blanchard; Jonathan A Javitch
Journal:  Nat Methods       Date:  2021-03-08       Impact factor: 28.547

Review 9.  Molecular Mechanisms Regulating the DNA Repair Protein APE1: A Focus on Its Flexible N-Terminal Tail Domain.

Authors:  David J López; José A Rodríguez; Sonia Bañuelos
Journal:  Int J Mol Sci       Date:  2021-06-11       Impact factor: 5.923

Review 10.  Revealing Nucleic Acid Mutations Using Förster Resonance Energy Transfer-Based Probes.

Authors:  Nina P L Junager; Jacob Kongsted; Kira Astakhova
Journal:  Sensors (Basel)       Date:  2016-07-27       Impact factor: 3.576

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