Literature DB >> 26287629

NMR Dynamics of Transmembrane and Intracellular Domains of p75NTR in Lipid-Protein Nanodiscs.

Konstantin S Mineev1, Sergey A Goncharuk2, Pavel K Kuzmichev2, Marçal Vilar3, Alexander S Arseniev2.   

Abstract

P75NTR is a type I integral membrane protein that plays a key role in neurotrophin signaling. However, structural data for the receptor in various functional states are sparse and controversial. In this work, we studied the spatial structure and mobility of the transmembrane and intracellular parts of p75NTR, incorporated into lipid-protein nanodiscs of various sizes and compositions, by solution NMR spectroscopy. Our data reveal a high level of flexibility and disorder in the juxtamembrane chopper domain of p75NTR, which results in the motions of the receptor death domain being uncoupled from the motions of the transmembrane helix. Moreover, none of the intracellular domains of p75NTR demonstrated a propensity to interact with the membrane or to self-associate under the experimental conditions. The obtained data are discussed in the context of the receptor activation mechanism.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26287629      PMCID: PMC4547337          DOI: 10.1016/j.bpj.2015.07.009

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  46 in total

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Review 3.  Drain of the brain: low-affinity p75 neurotrophin receptor affords a molecular sink for clearance of cortical amyloid β by the cholinergic modulator system.

Authors:  Saak V Ovsepian; Jochen Herms
Journal:  Neurobiol Aging       Date:  2013-06-05       Impact factor: 4.673

4.  A continuous cell-free translation system capable of producing polypeptides in high yield.

Authors:  A S Spirin; V I Baranov; L A Ryabova; S Y Ovodov; Y B Alakhov
Journal:  Science       Date:  1988-11-25       Impact factor: 47.728

Review 5.  Membrane protein assembly into Nanodiscs.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  FEBS Lett       Date:  2009-10-16       Impact factor: 4.124

Review 6.  Small molecule modulation of p75 neurotrophin receptor functions.

Authors:  Frank M Longo; Stephen M Massa
Journal:  CNS Neurol Disord Drug Targets       Date:  2008-02       Impact factor: 4.388

7.  Lipid-protein nanodiscs promote in vitro folding of transmembrane domains of multi-helical and multimeric membrane proteins.

Authors:  Zakhar O Shenkarev; Ekaterina N Lyukmanova; Ivan O Butenko; Lada E Petrovskaya; Alexander S Paramonov; Mikhail A Shulepko; Oksana V Nekrasova; Mikhail P Kirpichnikov; Alexander S Arseniev
Journal:  Biochim Biophys Acta       Date:  2012-11-13

8.  Ligand-independent signaling by disulfide-crosslinked dimers of the p75 neurotrophin receptor.

Authors:  Marçal Vilar; Ioannis Charalampopoulos; Rajappa S Kenchappa; Alessandra Reversi; Joanna M Klos-Applequist; Esra Karaca; Anastasia Simi; Carlos Spuch; Soyoung Choi; Wilma J Friedman; Johan Ericson; Giampietro Schiavo; Bruce D Carter; Carlos F Ibáñez
Journal:  J Cell Sci       Date:  2009-08-25       Impact factor: 5.285

9.  Preparative scale expression of membrane proteins in Escherichia coli-based continuous exchange cell-free systems.

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Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
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  9 in total

Review 1.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

2.  Structural Basis of p75 Transmembrane Domain Dimerization.

Authors:  Kirill D Nadezhdin; Irmina García-Carpio; Sergey A Goncharuk; Konstantin S Mineev; Alexander S Arseniev; Marçal Vilar
Journal:  J Biol Chem       Date:  2016-04-07       Impact factor: 5.157

3.  Microfluidic platform for efficient Nanodisc assembly, membrane protein incorporation, and purification.

Authors:  James H Wade; Joshua D Jones; Ivan L Lenov; Colleen M Riordan; Stephen G Sligar; Ryan C Bailey
Journal:  Lab Chip       Date:  2017-08-22       Impact factor: 6.799

Review 4.  Nanodiscs for structural and functional studies of membrane proteins.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Nat Struct Mol Biol       Date:  2016-06-07       Impact factor: 15.369

Review 5.  Opportunities and Challenges of Backbone, Sidechain, and RDC Experiments to Study Membrane Protein Dynamics in a Detergent-Free Lipid Environment Using Solution State NMR.

Authors:  Stefan Bibow
Journal:  Front Mol Biosci       Date:  2019-10-25

6.  Fast-diffusing p75NTR monomers support apoptosis and growth cone collapse by neurotrophin ligands.

Authors:  Laura Marchetti; Fulvio Bonsignore; Francesco Gobbo; Rosy Amodeo; Mariantonietta Calvello; Ajesh Jacob; Giovanni Signore; Chiara Schirripa Spagnolo; David Porciani; Marco Mainardi; Fabio Beltram; Stefano Luin; Antonino Cattaneo
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-12       Impact factor: 11.205

7.  TrkA-mediated endocytosis of p75-CTF prevents cholinergic neuron death upon γ-secretase inhibition.

Authors:  María Luisa Franco; Irmina García-Carpio; Raquel Comaposada-Baró; Juan J Escribano-Saiz; Lucía Chávez-Gutiérrez; Marçal Vilar
Journal:  Life Sci Alliance       Date:  2021-02-03

8.  Structural basis of death domain signaling in the p75 neurotrophin receptor.

Authors:  Zhi Lin; Jason Y Tann; Eddy T H Goh; Claire Kelly; Kim Buay Lim; Jian Fang Gao; Carlos F Ibanez
Journal:  Elife       Date:  2015-12-08       Impact factor: 8.140

9.  Revising the mechanism of p75NTR activation: intrinsically monomeric state of death domains invokes the "helper" hypothesis.

Authors:  Sergey A Goncharuk; Lilya E Artemieva; Kirill D Nadezhdin; Alexander S Arseniev; Konstantin S Mineev
Journal:  Sci Rep       Date:  2020-08-13       Impact factor: 4.379

  9 in total

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