Literature DB >> 26284340

Theory and Practice of Lineage Tracing.

Ya-Chieh Hsu1,2.   

Abstract

Lineage tracing is a method that delineates all progeny produced by a single cell or a group of cells. The possibility of performing lineage tracing initiated the field of Developmental Biology and continues to revolutionize Stem Cell Biology. Here, I introduce the principles behind a successful lineage-tracing experiment. In addition, I summarize and compare different methods for conducting lineage tracing and provide examples of how these strategies can be implemented to answer fundamental questions in development and regeneration. The advantages and limitations of each method are also discussed.
© 2015 AlphaMed Press.

Entities:  

Keywords:  Adult stem cells; Cell biology; Cell cycle; Cell surface markers; Stem cell-microenvironment interactions

Mesh:

Substances:

Year:  2015        PMID: 26284340      PMCID: PMC4618107          DOI: 10.1002/stem.2123

Source DB:  PubMed          Journal:  Stem Cells        ISSN: 1066-5099            Impact factor:   6.277


  44 in total

1.  Defining the epithelial stem cell niche in skin.

Authors:  Tudorita Tumbar; Geraldine Guasch; Valentina Greco; Cedric Blanpain; William E Lowry; Michael Rendl; Elaine Fuchs
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

2.  Alpha complementation in the Cre recombinase enzyme.

Authors:  Emilio Casanova; Thomas Lemberger; Sandra Fehsenfeld; Theo Mantamadiotis; Günther Schütz
Journal:  Genesis       Date:  2003-09       Impact factor: 2.487

3.  Neurogenesis in the striatum of the adult human brain.

Authors:  Aurélie Ernst; Kanar Alkass; Samuel Bernard; Mehran Salehpour; Shira Perl; John Tisdale; Göran Possnert; Henrik Druid; Jonas Frisén
Journal:  Cell       Date:  2014-02-20       Impact factor: 41.582

4.  A biological cell labeling technique and its use in expermental embryology.

Authors:  N Le Douarin
Journal:  Dev Biol       Date:  1973-01       Impact factor: 3.582

5.  Lineage tracing of stem and progenitor cells of the murine corneal epithelium.

Authors:  Aya Amitai-Lange; Anna Altshuler; Jeffrey Bubley; Noora Dbayat; Beatrice Tiosano; Ruby Shalom-Feuerstein
Journal:  Stem Cells       Date:  2015-01       Impact factor: 6.277

6.  Clonal dynamics of native haematopoiesis.

Authors:  Jianlong Sun; Azucena Ramos; Brad Chapman; Jonathan B Johnnidis; Linda Le; Yu-Jui Ho; Allon Klein; Oliver Hofmann; Fernando D Camargo
Journal:  Nature       Date:  2014-10-05       Impact factor: 49.962

7.  Tracing the fate of limbal epithelial progenitor cells in the murine cornea.

Authors:  N Di Girolamo; S Bobba; V Raviraj; N C Delic; I Slapetova; P R Nicovich; G M Halliday; D Wakefield; R Whan; J G Lyons
Journal:  Stem Cells       Date:  2015-01       Impact factor: 6.277

8.  In vivo targeting of adult neural stem cells in the dentate gyrus by a split-cre approach.

Authors:  Ruth Beckervordersandforth; Aditi Deshpande; Iris Schäffner; Hagen B Huttner; Alexandra Lepier; Dieter Chichung Lie; Magdalena Götz
Journal:  Stem Cell Reports       Date:  2014-02-06       Impact factor: 7.765

9.  Intestinal crypt homeostasis revealed at single-stem-cell level by in vivo live imaging.

Authors:  Laila Ritsma; Saskia I J Ellenbroek; Anoek Zomer; Hugo J Snippert; Frederic J de Sauvage; Benjamin D Simons; Hans Clevers; Jacco van Rheenen
Journal:  Nature       Date:  2014-02-16       Impact factor: 49.962

10.  Dedifferentiation of committed epithelial cells into stem cells in vivo.

Authors:  Purushothama Rao Tata; Hongmei Mou; Ana Pardo-Saganta; Rui Zhao; Mythili Prabhu; Brandon M Law; Vladimir Vinarsky; Josalyn L Cho; Sylvie Breton; Amar Sahay; Benjamin D Medoff; Jayaraj Rajagopal
Journal:  Nature       Date:  2013-11-06       Impact factor: 49.962

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  19 in total

1.  Inhibition of astrocyte FAK-JNK signaling promotes subventricular zone neurogenesis through CNTF.

Authors:  Cuihong Jia; Matthew P Keasey; Chiharu Lovins; Theo Hagg
Journal:  Glia       Date:  2018-11       Impact factor: 7.452

Review 2.  Skin and Its Regenerative Powers: An Alliance between Stem Cells and Their Niche.

Authors:  Kevin Andrew Uy Gonzales; Elaine Fuchs
Journal:  Dev Cell       Date:  2017-11-20       Impact factor: 12.270

Review 3.  Tools and Concepts for Interrogating and Defining Cellular Identity.

Authors:  Kara L McKinley; David Castillo-Azofeifa; Ophir D Klein
Journal:  Cell Stem Cell       Date:  2020-05-07       Impact factor: 24.633

Review 4.  Recent advances in understanding cancer-associated fibroblasts in pancreatic cancer.

Authors:  Huocong Huang; Rolf A Brekken
Journal:  Am J Physiol Cell Physiol       Date:  2020-05-20       Impact factor: 4.249

Review 5.  Mechanisms regulating mammalian spermatogenesis and fertility recovery following germ cell depletion.

Authors:  Hue M La; Robin M Hobbs
Journal:  Cell Mol Life Sci       Date:  2019-06-28       Impact factor: 9.261

6.  A single-cell atlas of mouse lung development.

Authors:  Nicholas M Negretti; Erin J Plosa; John T Benjamin; Bryce A Schuler; A Christian Habermann; Christopher S Jetter; Peter Gulleman; Claire Bunn; Alice N Hackett; Meaghan Ransom; Chase J Taylor; David Nichols; Brittany K Matlock; Susan H Guttentag; Timothy S Blackwell; Nicholas E Banovich; Jonathan A Kropski; Jennifer M S Sucre
Journal:  Development       Date:  2021-12-20       Impact factor: 6.868

7.  Expansion of FGFR3-positive nucleus pulposus cells plays important roles in postnatal nucleus pulposus growth and regeneration.

Authors:  Meng Xu; Junlan Huang; Min Jin; Wanling Jiang; Fengtao Luo; Qiaoyan Tan; Ruobin Zhang; Xiaoqing Luo; Liang Kuang; Dali Zhang; Sen Liang; Huabing Qi; Hangang Chen; Zhenhong Ni; Nan Su; Jing Yang; Xiaolan Du; Bo Chen; Chuxia Deng; Yangli Xie; Lin Chen
Journal:  Stem Cell Res Ther       Date:  2022-06-03       Impact factor: 8.079

8.  The use of commercially available adhesive tapes to preserve cartilage and bone tissue integrity during cryosectioning.

Authors:  Maxwell A Serowoky; Divya D Patel; Jason W Hsieh; Francesca V Mariani
Journal:  Biotechniques       Date:  2018-10       Impact factor: 1.993

Review 9.  Connecting past and present: single-cell lineage tracing.

Authors:  Cheng Chen; Yuanxin Liao; Guangdun Peng
Journal:  Protein Cell       Date:  2022-04-19       Impact factor: 15.328

Review 10.  Discovering New Progenitor Cell Populations through Lineage Tracing and In Vivo Imaging.

Authors:  Rudra Nayan Das; Karina Yaniv
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-10-01       Impact factor: 9.708

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