| Literature DB >> 26279943 |
Sean R Dickinson1, Peter Müller2, Joseph M Tanski1.
Abstract
The crystal structure of the title compound, C7H4BrNO, has been determined, revealing a partial mol-ecular packing disorder such that a 180° rotation of the mol-ecule about the phenol C-O bond results in disorder of the bromine and nitrile groups. The disorder has been parameterized as a disorder of only the bromine and nitrile substituents on a unique phenol ring. An intra-molecular O-H⋯Br contact occurs. In the crystal, O-H⋯Br/O-H⋯Nnitrile hydrogen bonding is present between the disordered bromine and nitrile substituents and the phenol group, forming a spiral chain about a twofold screw axis extending parallel to the b-axis direction. Within this spiral chain, the mol-ecules also inter-act, forming offset face-to-face π-stacking inter-actions with plane-to-centroid distance of 3.487 (1) Å.Entities:
Keywords: crystal structure; disorder; hydrogen bonding; π-stacking
Year: 2015 PMID: 26279943 PMCID: PMC4518954 DOI: 10.1107/S2056989015011974
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C7H4BrNO | |
| Monoclinic, | Mo |
| Cell parameters from 6401 reflections | |
| θ = 3.0–30.5° | |
| µ = 5.98 mm−1 | |
| β = 96.062 (1)° | |
| Needle, colourless | |
| 0.22 × 0.10 × 0.04 mm |
| Bruker APEXII CCD diffractometer | 1977 independent reflections |
| Radiation source: fine-focus sealed tube | 1776 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.3333 pixels mm-1 | θmax = 30.0°, θmin = 3.0° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 9903 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1977 reflections | (Δ/σ)max = 0.002 |
| 110 parameters | Δρmax = 0.37 e Å−3 |
| 102 restraints | Δρmin = −0.45 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.70927 (9) | 0.4093 (4) | 0.76425 (9) | 0.0264 (3) | |
| H1 | 0.6483 (13) | 0.420 (6) | 0.7450 (18) | 0.04* | |
| C1 | 0.66122 (12) | 0.6091 (4) | 0.92251 (12) | 0.0195 (3) | |
| C7 | 0.5648 (2) | 0.7338 (8) | 0.8786 (2) | 0.0225 (6) | 0.9272 (13) |
| N1 | 0.4862 (2) | 0.8421 (7) | 0.84343 (18) | 0.0281 (5) | 0.9272 (13) |
| Br1A | 0.5216 (4) | 0.7707 (10) | 0.8684 (3) | 0.0332 (13) | 0.0728 (13) |
| C2 | 0.73013 (11) | 0.4575 (4) | 0.86256 (11) | 0.0185 (3) | |
| C3 | 0.82692 (11) | 0.3564 (4) | 0.90818 (11) | 0.0186 (3) | |
| Br1 | 0.92397 (2) | 0.15982 (5) | 0.82834 (2) | 0.02008 (6) | 0.9272 (13) |
| C7A | 0.8979 (14) | 0.192 (6) | 0.8577 (15) | 0.02008 (6) | 0.0728 (13) |
| N1A | 0.9658 (13) | 0.131 (5) | 0.8138 (13) | 0.02008 (6) | 0.0728 (13) |
| C4 | 0.85334 (13) | 0.3982 (4) | 1.00854 (12) | 0.0234 (3) | |
| H4 | 0.9194 | 0.3259 | 1.0376 | 0.028* | |
| C5 | 0.78350 (14) | 0.5460 (5) | 1.06728 (12) | 0.0267 (3) | |
| H5 | 0.8017 | 0.5739 | 1.1363 | 0.032* | |
| C6 | 0.68739 (13) | 0.6519 (4) | 1.02446 (12) | 0.0237 (3) | |
| H6 | 0.6394 | 0.7532 | 1.064 | 0.028* |
| O1 | 0.0175 (5) | 0.0414 (7) | 0.0194 (5) | 0.0021 (5) | −0.0026 (4) | −0.0046 (5) |
| C1 | 0.0174 (7) | 0.0191 (7) | 0.0216 (7) | −0.0012 (5) | 0.0008 (6) | 0.0021 (6) |
| C7 | 0.0186 (12) | 0.0255 (11) | 0.0237 (10) | 0.0015 (11) | 0.0044 (11) | −0.0002 (7) |
| N1 | 0.0217 (12) | 0.0369 (13) | 0.0253 (11) | 0.0038 (9) | 0.0012 (8) | 0.0005 (9) |
| Br1A | 0.029 (3) | 0.031 (2) | 0.040 (2) | 0.001 (2) | 0.003 (2) | −0.0004 (15) |
| C2 | 0.0173 (7) | 0.0186 (7) | 0.0190 (7) | −0.0024 (6) | −0.0007 (5) | 0.0016 (6) |
| C3 | 0.0161 (6) | 0.0173 (7) | 0.0224 (7) | −0.0009 (6) | 0.0012 (5) | 0.0015 (6) |
| Br1 | 0.01502 (9) | 0.02106 (9) | 0.02437 (10) | 0.00176 (7) | 0.00305 (6) | −0.00176 (7) |
| C7A | 0.01502 (9) | 0.02106 (9) | 0.02437 (10) | 0.00176 (7) | 0.00305 (6) | −0.00176 (7) |
| N1A | 0.01502 (9) | 0.02106 (9) | 0.02437 (10) | 0.00176 (7) | 0.00305 (6) | −0.00176 (7) |
| C4 | 0.0198 (7) | 0.0252 (8) | 0.0241 (8) | −0.0006 (6) | −0.0037 (6) | 0.0047 (6) |
| C5 | 0.0290 (8) | 0.0325 (9) | 0.0176 (7) | −0.0004 (7) | −0.0023 (6) | 0.0027 (7) |
| C6 | 0.0236 (8) | 0.0265 (8) | 0.0215 (7) | −0.0004 (6) | 0.0043 (6) | 0.0003 (7) |
| O1—C2 | 1.3487 (19) | C3—C4 | 1.381 (2) |
| O1—H1 | 0.810 (16) | C3—Br1 | 1.9071 (16) |
| C1—C2 | 1.401 (2) | C7A—N1A | 1.143 (16) |
| C1—C6 | 1.402 (2) | C4—C5 | 1.393 (2) |
| C1—C7 | 1.416 (3) | C4—H4 | 0.95 |
| C1—Br1A | 1.988 (5) | C5—C6 | 1.384 (2) |
| C7—N1 | 1.161 (4) | C5—H5 | 0.95 |
| C2—C3 | 1.400 (2) | C6—H6 | 0.95 |
| C3—C7A | 1.363 (14) | ||
| C2—O1—H1 | 113.7 (18) | C4—C3—Br1 | 119.86 (12) |
| C2—C1—C6 | 121.38 (14) | C2—C3—Br1 | 118.52 (11) |
| C2—C1—C7 | 119.29 (17) | N1A—C7A—C3 | 164 (3) |
| C6—C1—C7 | 119.28 (17) | C3—C4—C5 | 120.30 (15) |
| C2—C1—Br1A | 122.09 (17) | C3—C4—H4 | 119.9 |
| C6—C1—Br1A | 116.52 (16) | C5—C4—H4 | 119.9 |
| N1—C7—C1 | 178.7 (4) | C6—C5—C4 | 119.63 (15) |
| O1—C2—C3 | 118.60 (14) | C6—C5—H5 | 120.2 |
| O1—C2—C1 | 124.04 (14) | C4—C5—H5 | 120.2 |
| C3—C2—C1 | 117.35 (14) | C5—C6—C1 | 119.71 (16) |
| C7A—C3—C4 | 116.1 (9) | C5—C6—H6 | 120.1 |
| C7A—C3—C2 | 122.2 (9) | C1—C6—H6 | 120.1 |
| C4—C3—C2 | 121.62 (15) | ||
| C6—C1—C2—O1 | 179.94 (15) | C1—C2—C3—Br1 | −178.46 (11) |
| C7—C1—C2—O1 | −2.6 (3) | C4—C3—C7A—N1A | −88 (8) |
| Br1A—C1—C2—O1 | 0.4 (3) | C2—C3—C7A—N1A | 96 (8) |
| C6—C1—C2—C3 | −1.2 (2) | C7A—C3—C4—C5 | −176.5 (12) |
| C7—C1—C2—C3 | 176.33 (18) | C2—C3—C4—C5 | −0.4 (2) |
| Br1A—C1—C2—C3 | 179.33 (18) | Br1—C3—C4—C5 | 179.11 (13) |
| O1—C2—C3—C7A | −4.1 (13) | C3—C4—C5—C6 | −0.2 (3) |
| C1—C2—C3—C7A | 176.9 (13) | C4—C5—C6—C1 | 0.1 (3) |
| O1—C2—C3—C4 | −179.97 (15) | C2—C1—C6—C5 | 0.6 (2) |
| C1—C2—C3—C4 | 1.1 (2) | C7—C1—C6—C5 | −176.89 (19) |
| O1—C2—C3—Br1 | 0.5 (2) | Br1A—C1—C6—C5 | −179.86 (18) |
| H··· | ||||
| O1—H1···N1i | 0.81 (2) | 2.04 (2) | 2.810 (3) | 159 (2) |
| O1—H1···Br1 | 0.81 (2) | 2.82 (2) | 3.262 (5) | 116 (2) |
| O1—H1···Br1 | 0.81 (2) | 2.62 (2) | 3.379 (5) | 156 (2) |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O1H1N1i | 0.81(2) | 2.04(2) | 2.810(3) | 159(2) |
| O1H1Br1 | 0.81(2) | 2.82(2) | 3.262(5) | 116(2) |
| O1H1Br1 | 0.81(2) | 2.62(2) | 3.379(5) | 156(2) |
Symmetry code: (i) .