Literature DB >> 26275619

Developments in the Implementation of Acoustic Droplet Ejection for Protein Crystallography.

Ping Wu1, Cameron Noland1, Mark Ultsch1, Bonnie Edwards2, David Harris2, Robert Mayer1, Seth F Harris3.   

Abstract

Acoustic droplet ejection (ADE) enables crystallization experiments at the low-nanoliter scale, resulting in rapid vapor diffusion equilibration dynamics and efficient reagent usage in the empirical discovery of structure-enabling protein crystallization conditions. We extend our validation of this technology applied to the diverse physicochemical property space of aqueous crystallization reagents where dynamic fluid analysis coupled to ADE aids in accurate and precise dispensations. Addition of crystallization seed stocks, chemical additives, or small-molecule ligands effectively modulates crystallization, and we here provide examples in optimization of crystal morphology and diffraction quality by the acoustic delivery of ultra-small volumes of these cofactors. Additional applications are discussed, including set up of in situ proteolysis and alternate geometries of crystallization that leverage the small scale afforded by acoustic delivery. Finally, we describe parameters of a system of automation in which the acoustic liquid handler is integrated with a robotic arm, plate centrifuge, peeler, sealer, and stacks, which allows unattended high-throughput crystallization experimentation.
© 2015 Society for Laboratory Automation and Screening.

Entities:  

Keywords:  acoustic droplet ejection; automated biology; automation; miniaturization; nanoliter crystallization; structural biology

Mesh:

Substances:

Year:  2015        PMID: 26275619     DOI: 10.1177/2211068215598938

Source DB:  PubMed          Journal:  J Lab Autom        ISSN: 2211-0682


  5 in total

1.  Dynamic Structural Biology Experiments at XFEL or Synchrotron Sources.

Authors:  Pierre Aller; Allen M Orville
Journal:  Methods Mol Biol       Date:  2021

2.  Gentle, fast and effective crystal soaking by acoustic dispensing.

Authors:  Patrick M Collins; Jia Tsing Ng; Romain Talon; Karolina Nekrosiute; Tobias Krojer; Alice Douangamath; Jose Brandao-Neto; Nathan Wright; Nicholas M Pearce; Frank von Delft
Journal:  Acta Crystallogr D Struct Biol       Date:  2017-03-06       Impact factor: 7.652

3.  Automated Protocols for Macromolecular Crystallization at the MRC Laboratory of Molecular Biology.

Authors:  Fabrice Gorrec; Jan Löwe
Journal:  J Vis Exp       Date:  2018-01-24       Impact factor: 1.355

4.  Using sound pulses to solve the crystal-harvesting bottleneck.

Authors:  Yasmin N Samara; Haley M Brennan; Liam McCarthy; Mary T Bollard; Denise Laspina; Jakub M Wlodek; Stefanie L Campos; Ramya Natarajan; Kazimierz Gofron; Sean McSweeney; Alexei S Soares; Ludmila Leroy
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-10-02       Impact factor: 7.652

5.  Increasing the throughput of crystallization condition screens: Challenges and pitfalls of acoustic dispensing systems.

Authors:  Robin Kryštůfek; Pavel Šácha
Journal:  MethodsX       Date:  2019-09-25
  5 in total

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