| Literature DB >> 26267274 |
Stewart Coleman1, Julia Hornig1, Sarah Maddux1, K Yeon Choi1, Alistair McGregor1.
Abstract
Development of a cytomegalovirus (CMV) vaccine is a major public health priority due to the risk ofEntities:
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Year: 2015 PMID: 26267274 PMCID: PMC4534421 DOI: 10.1371/journal.pone.0135567
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
GPCMV Glycoprotein Genes, predicted size, homology and knockout site.
| GPCMV Gene (co-ordinates) | Glycoprotein (predicted size) | Signal peptide predicted | Glycosylation Sites | % Identity with HCMV (BLAST) | Site of ORF Knockout |
|---|---|---|---|---|---|
|
| gB (901 aa/ 102.2 kDa) | yes | 32 (O-linked) 15 (N-linked) | 45% | codon 528 insertion |
|
| gN (134 aa/ 14 kDa) | yes | 17 (O-linked) 2 (N-linked) | 44% | codon 71 insertion |
|
| gO (370 aa / 41.8 kDa) | 13(O-linked) 13(N-linked) | 27% | codon 110 insertion | |
|
| gH (724 aa/ 81.8 kDa) | yes | 10 (O-linked) 9 (N-linked) | 29% | codon 200 insertion/del |
|
| gM (349 aa/ 39.7 kDa) | yes | 0 (O-linked) 2 (N-linked) | 52% | codon 170 insertion |
|
| gL (258 aa/ 29.7 kDa) | yes | 3 (O-linked) 3 (N-linked) | 42% | codon 45 insertion |
c = complement DNA strand coding, aa = amino acids.
Co-ordinates based on complete GPCMV (22122 strain) sequence (GenBank: AB592928.1); Kanai et al. [10]. Percentage identity determined by BLAST analysis of GPCMV against HCMV Towne strain. Predicted protein size is based on complete protein predicted sequence and calculated using MacVector.
Signal peptide sequence predicted by web based programs. See S4 Fig
Post translational glycosylation predicted based on web programs: NetOGlyc 4.0 Server (http://www.cbs.dtu.dk/services/NetOGlyc/) for O-glycosylation; and NetNGlyc 1.0 Server (http://www.cbs.dtu.dk/services/NetNGlyc/) for N- glycosylation. Total predicted number of N-glycosylation or O-glycosylation sites per glycoprotein are indicated.
Insertion site of the kanamycin (Km) cassette to knockout the various coding sequences was carried out using convenient restriction sites (see materials and methods). The insertion of the Km cassette disrupts the ORF at the specified codon.
Fig 1Electrophoresis of GPCMV glycoprotein gene expression by RT-PCR assay.
Agarose gel analysis of RT-PCR products. Expression of viral glycoprotein genes GP73 (gN), GP74 (gO) and GP100 (gM) was investigated at various time points post infection. Input virus was wild type GPCMV (strain 22122) on GPL cells (moi = 1 pfu/cell). RT-PCR was performed as described in materials and methods. RT-PCR analysis of time point samples 0, 4, 8, 16, 24, 48 hr post infection indicated. Controls: C1, no template; C2, infected cell lysate no reverse transcriptase stage. GAPDH control RT-PCR for all time samples.
Fig 2Transient expression of GPCMV gM and gN homologs and analysis of tagged proteins by western blot.
A. Predicted amino acid sequence for GP73 (gN) with potential glycosylation sites shaded in green. A truncated version of gN was generated by deletion of the first 40 codons, which included the majority of the predicted signal peptide sequence (underlined, see also S4 Fig). The truncated gN(s) initiated from the first internal methionine (shaded in red). B. Figure of gN and gM expression constructs. Full length gN tagged with C-terminal mCherry was designated gNmCherry, B(i). Full length gN with C-terminal FLAG epitope tag was designated gN(f), B(ii), and truncated gN designated gN(s), B(iii). Full length gM was C-terminal tagged with GFP and designated gMGFP, B(iv). Size of predicted MW of tagged proteins indicated (kDa). C. Western blots were performed on transient plasmid expression of gN and gM tagged proteins in GPL cells. C(i) gNmCherry expression detected using anti-mCherry antibody. Lanes: (1) kDa ladder; (2) and (3) gNmcherry; (4) mock untransfected GPL cell lysate. C(ii) gN(f)FLAG expression detected using anti-FLAG antibody. Lanes: (1) kDa ladder; (2) and (3) gN(f)FLAG. C(iii) gN(s)FLAG expression detected using anti-FLAG antibody. Lanes: (1) kDa ladder; (2) and (3) gN(s)FLAG (4) mock untransfected GPL cell lysate. C(iv) gMGFP expression detected using anti-GFP antibody. Lanes: (1) kDa ladder; (2) and (3) gM; (4) mock untransfected GPL cell lysate. D. gN and gM expression in the presence or absence of glycosylation inhibitor. D(i) Western blot of gN(f)FLAG in the presence of tunicamycin (lane 2) or absence (lane 1). D(ii) Western blot of gN(s)FLAG in the presence of tunicamycin (lane 2) or absence (lane 1). D(iii) Western blot of gMGFP in the presence of tunicamycin (lane 2) or absence (lane 1). Control mock untransfected GPL cell lysate lane 3 D(i)-(iii).
Fig 3Transient co-expression of GPCMV gM and gN.
Tagged versions of gN and gM were transiently co-expressed in GPL cells and cellular localization patterns investigated by immunofluorescence or autofluorescence assay. Panels A-D, gMGFP and gNmCherry co-localization studies. A and B show gM and gN separately within the same cell. C is the merged image for A and B. D is the overlay of C with DAPI stain to indicate location of the nucleus. E-H, gMGFP and gN(f)FLAG co-localization with G merged image for panels E and F. H the overlay for DAPI stain with merged image G. I-L, gMGFP and gN(s)FLAG co-localization with K merged image for I and J. L overlay with DAPI staining.
Fig 4GPCMV gM /gN complex formation and immunoprecipitation (IP) assays.
All IPs were performed with GFP-Trap (ChromoTek) as described in materials and methods to immunopreciptiate proteins that interacted with gMGFP or GFP control. (i) gMGFP and gNmCherry co-expression and IP. Lanes 1 and 4 are total cell lysate of gMGFP and gNmCherry, respectively. Lanes 3 and 6, IP reactions. Lanes 2 and 5, control mock (MI) cell lysate. For gM detection, anti-GFP antibody (lanes 1–3). For gN detection, anti-mCherry antibody (lanes 4–6). (ii) Control GFP IP. GP84 protein tagged with GFP [51] was co-expressed with gN(f)FLAG. Lanes 1 and 4 total cell lysate for GP84GFP and gN(f)FLAG respectively. Lanes 3 and 6, IP reactions for GP84GFP and gN(f)FLAG transfected cells. Lanes 2 and 5 mock control (MI). (iii) gMGFP and gN(f)FLAG co-expression and IP. Lanes, 1 and 4 are total cell lysates of gMGFP and gN(f)FLAG transfected cells respectively. Lanes 3 and 6, IP reactions for gMGFP and gN(f)FLAG transfected cells. Lanes 2 and 5 mock (MI) control cell lysate. 6. Detection for gN(f)FLAG by anti-FLAG antibody. (iv). gMGFP and gN(s)FLAG co-expression and IP. Lanes, 1 and 4 are total cell lysate of gMGFP and gN(s)FLAG transfected cells respectively. Lanes 3 and 6, IP reactions for gMGFP and gN(s)FLAG transfected cells. Lanes 2 and 5, mock control (MI). Detection for gN(s)FLAG by anti-FLAG antibody. Specific protein bands are indicated by an arrow. In gMGFP expressing cells a second higher MW protein (100 kDa) was detected and labelled x. All gels (4–20%) SDS-PAGE included a lane for a kDa ladder (MagicMark Protein Standard, Life Technologies). Ladder lanes not shown.
Fig 5Transient expression constructs for GPCMV gH, gL, gO glycoproteins.
(i) Shows the structure of the C-terminal tagged ORFs and expression plasmids: gH (GP75) was tagged with GFP; gL (GP115) was tagged with mCherry; gO (GP74) both wild type and mutant ORFs were tagged with 3xFLAG tag. (ii) BLAST alignment of wild type and mutant gO ORFs. The 13 predicted N-glycosylation sites were knocked out in the mutant (gOdef) by substitution of an alanine (A) in place of threonine (T) to disrupt the N-glycosylation recognition sequence (N-X-T/S).
Fig 6Transient expression of wild type or mutant gO in the presence or absence of GPCMV.
The cellular location and molecular weight of gO protein was investigated by transient expression studies. Panels E, J and O are western blots for wild type or mutant gO using anti-FLAG antibody. Other panels are immunofluorescene images of wild type and mutant gO protein cellular localization by transient plasmid expression in GPL cells (A-D); GPL cells the presence of tunicamycin (glycosylation inhibitor, 2.5 ug/ml) (F-I); GPL cells plus GPCMV (K-N). Matched paired panels for gO (FITC) or gO (FITC) and DAPI (merged): A and B; C and D; F and G; H and I; K and L; M and N. Western blots: for wild type or gO mutant (E); wild type or gO mutant in the presence of tunicamycin (J); wild type or gO mutant in the presence of GPCMV (O).
Fig 7Transient expression and cellular co-localization of GPCMV gH, gL and gO.
Expression plasmids described in Fig 5 were used to transiently express the viral glycoproteins in GPL cells. Panels A-D, gHGFP and gLmCherry co-expression. A and B cellular location of gH and gL within the same cell respectively. C, overlay of A and B. D, merge of overlay and DAPI stain to indicate location of nucleus. Panels E-H, gHGFP, gLmCherry and gOFLAG. Individual cellular localization panels E, F and G. Merged panel H, shows co-localization of all three protein and DAPI stained nucleus. Panels I-L are for gHGFP, gLmCherry and gO(def)FLAG. Individual panels I, J and K. Merged image (L) for all three panels plus DAPI stained nucleus.
Fig 8GPCMV gH/gL/gO complex formation and immunoprecipitation (IP) assays.
All immunoprecipitations were performed with GFP-Trap (ChromoTek) as described in materials and methods to demonstrate protein:protein interaction with GFP tagged gH. Proteins were detected by specific antibodies to tags (GFP, mCherry or FLAG). Transient expression assays on GPL cells were carried out in different plasmid combinations as indicated A-F. Samples shown for each combination are total cell lysate (Lys) and IP from total cell lysate. Control proteins were GFP or FLAG tagged GP44 (polymerase subunit protein). A. gHGFP and gLmCherry IP: A(i) gHGFP western; A(ii) gL(mCherry) western. B. GFP control and gLmCherry control: B(i) GFPwestern; B(ii) gL (mCherry) western. C. GP44 and gHGFP: (i) gHGFPwestern; (ii) GP44(FLAG) western. D. gHGFP and gO (wt) in the presence of GPCMV: (i) gH western; (ii) gO(FLAG) western. E. gHGFP, gLmCherry and gO (wt): (i) gH western; (ii) gO (FLAG) western IP. F. gHGFP, gLmCherry and gO(def): (i) gH western; (ii) gO(def) western.
Fig 9GPCMV gH/gO complex formation and immunoprecipitation (IP) assays.
All immunoprecipitations were performed with GFP-Trap (ChomoTek) as described in materials and methods. Proteins detected by specific antibodies to tags (GFP or FLAG). Transient expression assays were carried out in different plasmid combinations as indicated A-E. Samples shown for each combination are total cell lysate (Lys) and IP from total cell lysate. Control protein was GFP. gHGFP and gOdefFLAG IP in presence (A) or absence (B) of gLmCherry: A(i) gH western and A(ii) gO (def) western; B(i) gHwestern; (ii) gO (def) western. C. GFP and gO(def) FLAG control: C(i) GFPwestern; C(ii) gO(def) western. D. gHGFP and gO(wt) FLAG in the presence of gLmCherry and tunicamycin: D(i) gH western; D(ii) gOgO western. E. gHGFP and gO(wt) FLAG in presence of tunicamycin: E(i) gH western; E(ii) gOwestern.
Fig 10Antibody immune response of convalescent guinea pigs to GPCMV and GPCMV glycoprotein complexes determined by ELISAs.
Pooled sera from GPCMV infected convalescent animals was used to evaluate immune response to GPCMV (A) or to specific glycoprotein complexes (B). (A) Anti-GPCMV ELISA. The immune response to GPCMV antigens was analyzed by an in-house ELISA (blue line square) compared to commercially available GPCMV ELISA kit from Bioexpress (green line circle). GPCMV sera negative for both assays are shown in blue and green dotted lines. (B) Immune response of convalescent pooled guinea pig serum to individual glycoprotein complexes. Anti-gB, light blue line (triangle); Anti-gH/gL, orange line (closed circle); Anti-gM/gN, purple line (star). Convalescent sera depleted of anti-gB antibody (-gB) (as described in materials and methods) was retested by ELISA to (C) anti-GPCMV ELISA (solid green line) to demonstrate retention of antibody response to other viral antigens, and (D) anti-gB specific ELISA (solid light green line) to demonstrate gB depletion compared to the original undepleted sera. All sera were diluted from 1:80 to 1:2560 in doubling dilutions. Control sera from animals negative for GPCMV were used for base line in all assays. ELISAs performed as described in materials and methods. Base level for background indicated by horizontal dotted red line.
Fig 11Transfection of glycoprotein mutant KO GPCMV BACs onto GPL cells.
Individual mutant GPCMV BACs were separately transfected onto GPL fibroblast cells to regenerate virus. GFP reporter gene encoded in the viral genome enabled real time tracking of the development of virus from individual transfected cells. Glycoprotein mutant GPCMV BACs were either transfected individually (panels A, C, E, G, I, K and L) or in combination with a rescue plasmid encoding a wild type locus to restore the mutant back to wild type phenotype where GFP virus could be detected spreading across the cell monolayer (panels B, D, F and H). The gH mutant was also transfected onto a cell line expressing gH in trans to support virus growth (panel J). A gH rescue virus was also generated by co-transfection with a rescue locus plasmid (data not shown). Panels K and L show the outcome for a gO knockout mutant based on the back drop of a virus carrying (L) or lacking (K) epithelial cell tropism. Only gO mutant GPCMV with epithelial tropism could grow on GPL cells. A rescue virus of panel K was generated by co-transfection of the gO GPCMV mutant with a wild type locus plasmid to restore wild type virus phenotype (data not shown). Images taken between day 16–18 post transfection.