Literature DB >> 26258682

Cell type-specific manipulation with GFP-dependent Cre recombinase.

Jonathan C Y Tang1,2,3, Stephanie Rudolph4, Onkar S Dhande5,6,7, Victoria E Abraira4, Seungwon Choi4, Sylvain W Lapan1,2,3, Iain R Drew4, Eugene Drokhlyansky1,2,3, Andrew D Huberman5,6,7, Wade G Regehr4, Constance L Cepko1,2,3.   

Abstract

There are many transgenic GFP reporter lines that allow the visualization of specific populations of cells. Using such lines for functional studies requires a method that transforms GFP into a molecule that enables genetic manipulation. We developed a method that exploits GFP for gene manipulation, Cre recombinase dependent on GFP (CRE-DOG), a split component system that uses GFP and its derivatives to directly induce Cre/loxP recombination. Using plasmid electroporation and AAV viral vectors, we delivered CRE-DOG to multiple GFP mouse lines, which led to effective recombination selectively in GFP-labeled cells. Furthermore, CRE-DOG enabled optogenetic control of these neurons. Beyond providing a new set of tools for manipulation of gene expression selectively in GFP(+) cells, we found that GFP can be used to reconstitute the activity of a protein not known to have a modular structure, suggesting that this strategy might be applicable to a wide range of proteins.

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Year:  2015        PMID: 26258682      PMCID: PMC4839275          DOI: 10.1038/nn.4081

Source DB:  PubMed          Journal:  Nat Neurosci        ISSN: 1097-6256            Impact factor:   24.884


  49 in total

1.  Fluorescent fusion protein knockout mediated by anti-GFP nanobody.

Authors:  Emmanuel Caussinus; Oguz Kanca; Markus Affolter
Journal:  Nat Struct Mol Biol       Date:  2011-12-11       Impact factor: 15.369

Review 2.  Adeno-associated viral vectors for mapping, monitoring, and manipulating neural circuits.

Authors:  J Nicholas Betley; Scott M Sternson
Journal:  Hum Gene Ther       Date:  2011-04-06       Impact factor: 5.695

3.  Efficient selection for high-expression transfectants with a novel eukaryotic vector.

Authors:  H Niwa; K Yamamura; J Miyazaki
Journal:  Gene       Date:  1991-12-15       Impact factor: 3.688

4.  Green fluorescent protein as a marker for gene expression.

Authors:  M Chalfie; Y Tu; G Euskirchen; W W Ward; D C Prasher
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

5.  Biological applications of protein splicing.

Authors:  Miquel Vila-Perelló; Tom W Muir
Journal:  Cell       Date:  2010-10-15       Impact factor: 41.582

6.  Codon-improved Cre recombinase (iCre) expression in the mouse.

Authors:  D R Shimshek; J Kim; M R Hübner; D J Spergel; F Buchholz; E Casanova; A F Stewart; P H Seeburg; R Sprengel
Journal:  Genesis       Date:  2002-01       Impact factor: 2.487

7.  Birthdate and outgrowth timing predict cellular mechanisms of axon target matching in the developing visual pathway.

Authors:  Jessica A Osterhout; Rana N El-Danaf; Phong L Nguyen; Andrew D Huberman
Journal:  Cell Rep       Date:  2014-07-31       Impact factor: 9.423

8.  Regulation of Cre recombinase by ligand-induced complementation of inactive fragments.

Authors:  Nicolas Jullien; François Sampieri; Alain Enjalbert; Jean-Paul Herman
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

9.  A gene expression atlas of the central nervous system based on bacterial artificial chromosomes.

Authors:  Shiaoching Gong; Chen Zheng; Martin L Doughty; Kasia Losos; Nicholas Didkovsky; Uta B Schambra; Norma J Nowak; Alexandra Joyner; Gabrielle Leblanc; Mary E Hatten; Nathaniel Heintz
Journal:  Nature       Date:  2003-10-30       Impact factor: 49.962

10.  Targeting cells with single vectors using multiple-feature Boolean logic.

Authors:  Lief E Fenno; Joanna Mattis; Charu Ramakrishnan; Minsuk Hyun; Soo Yeun Lee; Miao He; Jason Tucciarone; Aslihan Selimbeyoglu; Andre Berndt; Logan Grosenick; Kelly A Zalocusky; Hannah Bernstein; Haley Swanson; Chelsey Perry; Ilka Diester; Frederick M Boyce; Caroline E Bass; Rachael Neve; Z Josh Huang; Karl Deisseroth
Journal:  Nat Methods       Date:  2014-06-08       Impact factor: 28.547

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  32 in total

1.  Complementary networks of cortical somatostatin interneurons enforce layer specific control.

Authors:  Alexander Naka; Julia Veit; Ben Shababo; Rebecca K Chance; Davide Risso; David Stafford; Benjamin Snyder; Andrew Egladyous; Desiree Chu; Savitha Sridharan; Daniel P Mossing; Liam Paninski; John Ngai; Hillel Adesnik
Journal:  Elife       Date:  2019-03-18       Impact factor: 8.140

2.  A photoactivatable Cre-loxP recombination system for optogenetic genome engineering.

Authors:  Fuun Kawano; Risako Okazaki; Masayuki Yazawa; Moritoshi Sato
Journal:  Nat Chem Biol       Date:  2016-10-10       Impact factor: 15.040

Review 3.  Distinct antibody species: structural differences creating therapeutic opportunities.

Authors:  Serge Muyldermans; Vaughn V Smider
Journal:  Curr Opin Immunol       Date:  2016-02-27       Impact factor: 7.486

4.  Effect of ocular hypertension on the pattern of retinal ganglion cell subtype loss in a mouse model of early-onset glaucoma.

Authors:  S Daniel; K J Meyer; A F Clark; M G Anderson; C M McDowell
Journal:  Exp Eye Res       Date:  2019-06-15       Impact factor: 3.467

5.  Induction of Bdnf from promoter I following electroconvulsive seizures contributes to structural plasticity in neurons of the piriform cortex.

Authors:  Anthony D Ramnauth; Kristen R Maynard; Alisha S Kardian; BaDoi N Phan; Madhavi Tippani; Sumita Rajpurohit; John W Hobbs; Stephanie Cerceo Page; Andrew E Jaffe; Keri Martinowich
Journal:  Brain Stimul       Date:  2022-02-17       Impact factor: 8.955

6.  Adaptive Acceleration of Visually Evoked Smooth Eye Movements in Mice.

Authors:  Takashi Kodama; Sascha du Lac
Journal:  J Neurosci       Date:  2016-06-22       Impact factor: 6.167

7.  In Vivo Selection of a Computationally Designed SCHEMA AAV Library Yields a Novel Variant for Infection of Adult Neural Stem Cells in the SVZ.

Authors:  David S Ojala; Sabrina Sun; Jorge L Santiago-Ortiz; Mikhail G Shapiro; Philip A Romero; David V Schaffer
Journal:  Mol Ther       Date:  2017-09-08       Impact factor: 11.454

Review 8.  Assembly and repair of eye-to-brain connections.

Authors:  Supraja G Varadarajan; Andrew D Huberman
Journal:  Curr Opin Neurobiol       Date:  2018-10-16       Impact factor: 6.627

9.  Molecular Fingerprinting of On-Off Direction-Selective Retinal Ganglion Cells Across Species and Relevance to Primate Visual Circuits.

Authors:  Onkar S Dhande; Benjamin K Stafford; Katrin Franke; Rana El-Danaf; Kumiko A Percival; Ann H Phan; Peichao Li; Bryan J Hansen; Phong L Nguyen; Philipp Berens; W Rowland Taylor; Edward Callaway; Thomas Euler; Andrew D Huberman
Journal:  J Neurosci       Date:  2018-10-30       Impact factor: 6.167

Review 10.  Studies of cortical connectivity using optical circuit mapping methods.

Authors:  Paul G Anastasiades; Andre Marques-Smith; Simon J B Butt
Journal:  J Physiol       Date:  2017-12-04       Impact factor: 5.182

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