Literature DB >> 26256572

Metabolomics-proteomics profiles delineate metabolic changes in kidney fibrosis disease.

Hongxin Cao1,2, Aihua Zhang1, Hui Sun1, Xiaohang Zhou1, Yu Guan1, Qi Liu1, Ling Kong1, Xijun Wang1.   

Abstract

Kidney fibrosis (KF) is a common process that leads to the progression of various types of kidney disease including kidney-yang deficiency syndrome, however, little is known regarding the underlying biology of this disorder. Fortunately, integrated omics approaches provide the molecule fingerprints related to the disease. In an attempt to address this issue, we integrated metabolomics-proteomics profiles analyzed pathogenic mechanisms of KF based on rat model. A total 37 serum differential metabolites were contributed to KF progress, involved several important metabolic pathways. Using iTRAQ-based quantitative proteomics analysis, 126 differential serum proteins were identified and provide valuable insight into the underlying mechanisms of KF. These proteins appear to be involved in complement and coagulation cascades, regulation of actin cytoskeleton, MAPK signaling pathway, RNA transport, etc. Interestingly, pathway/network analysis of integrated proteomics and metabolomics data firstly reveals that these signaling pathways were closely related with KF. It further indicated that most of these proteins play a pivotal role in the regulation of metabolism pathways.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Animal proteomics; Kidney fibrosis; Metabolite; Metabolomics; Pathway; Protein

Mesh:

Year:  2015        PMID: 26256572     DOI: 10.1002/pmic.201500062

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  13 in total

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Review 2.  Advances in proteomic profiling of pediatric kidney diseases.

Authors:  Timothy D Cummins; Erik A Korte; Sagar Bhayana; Michael L Merchant; Michelle T Barati; William E Smoyer; Jon B Klein
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Review 3.  Metabolomics: Bridging the Gap between Pharmaceutical Development and Population Health.

Authors:  Vladimir Tolstikov
Journal:  Metabolites       Date:  2016-07-08

4.  Characteristic proteins in the plasma of postoperative colorectal and liver cancer patients with Yin deficiency of liver-kidney syndrome.

Authors:  Qing Ji; Wenhai Wang; Yunquan Luo; Feifei Cai; Yiyu Lu; Wanli Deng; Qi Li; Shibing Su
Journal:  Oncotarget       Date:  2017-10-11

Review 5.  Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources.

Authors:  Tara Eicher; Garrett Kinnebrew; Andrew Patt; Kyle Spencer; Kevin Ying; Qin Ma; Raghu Machiraju; And Ewy A Mathé
Journal:  Metabolites       Date:  2020-05-15

6.  Metabolomics Strategy Using High Resolution Mass Spectrometry Reveals Novel Biomarkers and Pain-Relief Effect of Traditional Chinese Medicine Prescription Wu-Zhu-Yu Decoction Acting on Headache Modelling Rats.

Authors:  Ran Liu; Huarong Xu; Xiaowen Zhang; Xiaotong Wang; Ziyue Yuan; Zhenyu Sui; Dong Wang; Kaishun Bi; Qing Li
Journal:  Molecules       Date:  2017-12-18       Impact factor: 4.411

Review 7.  Targeting regulation of tryptophan metabolism for colorectal cancer therapy: a systematic review.

Authors:  Hong-Lian Zhang; Ai-Hua Zhang; Jian-Hua Miao; Hui Sun; Guang-Li Yan; Fang-Fang Wu; Xi-Jun Wang
Journal:  RSC Adv       Date:  2019-01-23       Impact factor: 4.036

8.  Identification of key metabolic changes during liver fibrosis progression in rats using a urine and serum metabolomics approach.

Authors:  Hong Chang; Hong-Yu Meng; Shu-Min Liu; Yu Wang; Xiao-Xu Yang; Fang Lu; Hong-Yu Wang
Journal:  Sci Rep       Date:  2017-09-12       Impact factor: 4.379

9.  Metabolic characterization and pathway analysis of berberine protects against prostate cancer.

Authors:  Xianna Li; Aihua Zhang; Hui Sun; Zhidong Liu; Tianlei Zhang; Shi Qiu; Liang Liu; Xijun Wang
Journal:  Oncotarget       Date:  2017-04-28

10.  Studies on Novel Diagnostic and Predictive Biomarkers of Intrahepatic Cholestasis of Pregnancy Through Metabolomics and Proteomics.

Authors:  Ruirui Dong; Ningzhen Ye; Shaojie Zhao; Gaoying Wang; Yan Zhang; Tiejun Wang; Ping Zou; Jing Wang; Tingting Yao; Minjian Chen; Conghua Zhou; Ting Zhang; Liang Luo
Journal:  Front Immunol       Date:  2021-10-14       Impact factor: 7.561

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