Literature DB >> 26248294

State-of-the-art strategies for targeting protein-protein interactions by small-molecule inhibitors.

Chunquan Sheng1, Guoqiang Dong, Zhenyuan Miao, Wannian Zhang, Wei Wang.   

Abstract

Targeting protein-protein interactions (PPIs) has emerged as a viable approach in modern drug discovery. However, the identification of small molecules enabling us to effectively interrupt their interactions presents significant challenges. In the recent past, significant advances have been made in the development of new biological and chemical strategies to facilitate the discovery process of small-molecule PPI inhibitors. This review aims to highlight the state-of-the-art technologies and the achievements made recently in this field. The "hot spots" of PPIs have been proved to be critical for small molecules to bind. Three strategies including screening, designing, and synthetic approaches have been explored for discovering PPI inhibitors by targeting the "hot spots". Although the classic high throughput screening approach can be used, fragment screening, fragment-based drug design and newly improved virtual screening are demonstrated to be more effective in the discovery of PPI inhibitors. In addition to screening approaches, design strategies including anchor-based and small molecule mimetics of secondary structures involved in PPIs have become powerful tools as well. Finally, constructing new chemically spaced libraries with high diversity and complexity is becoming an important area of interest for PPI inhibitors. The successful cases from the recent five year studies are used to illustrate how these approaches are implemented to uncover and optimize small molecule PPI inhibitors and notably some of them have become promising therapeutics.

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Year:  2015        PMID: 26248294     DOI: 10.1039/c5cs00252d

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  44 in total

Review 1.  Drugging Ras GTPase: a comprehensive mechanistic and signaling structural view.

Authors:  Shaoyong Lu; Hyunbum Jang; Shuo Gu; Jian Zhang; Ruth Nussinov
Journal:  Chem Soc Rev       Date:  2016-07-11       Impact factor: 54.564

2.  Fr-PPIChem: An Academic Compound Library Dedicated to Protein-Protein Interactions.

Authors:  Nicolas Bosc; Christophe Muller; Laurent Hoffer; David Lagorce; Stéphane Bourg; Carine Derviaux; Marie-Edith Gourdel; Jean-Christophe Rain; Thomas W Miller; Bruno O Villoutreix; Maria A Miteva; Pascal Bonnet; Xavier Morelli; Olivier Sperandio; Philippe Roche
Journal:  ACS Chem Biol       Date:  2020-05-05       Impact factor: 5.100

Review 3.  Small molecules inhibiting Keap1-Nrf2 protein-protein interactions: a novel approach to activate Nrf2 function.

Authors:  Chunlin Zhuang; Zhongli Wu; Chengguo Xing; Zhenyuan Miao
Journal:  Medchemcomm       Date:  2016-11-17       Impact factor: 3.597

4.  Targeting Unoccupied Surfaces on Protein-Protein Interfaces.

Authors:  David Rooklin; Ashley E Modell; Haotian Li; Viktoriya Berdan; Paramjit S Arora; Yingkai Zhang
Journal:  J Am Chem Soc       Date:  2017-08-04       Impact factor: 15.419

5.  A new strategy for the in vitro selection of stapled peptide inhibitors by mRNA display.

Authors:  Emil S Iqbal; Stacie L Richardson; Nicolas A Abrigo; Kara K Dods; H Estheban Osorio Franco; Heather S Gerrish; Hari Kiran Kotapati; Iain M Morgan; Douglas S Masterson; Matthew C T Hartman
Journal:  Chem Commun (Camb)       Date:  2019-07-10       Impact factor: 6.222

6.  Side-Chain Conformational Preferences Govern Protein-Protein Interactions.

Authors:  Andrew M Watkins; Richard Bonneau; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2016-08-09       Impact factor: 15.419

7.  Development of potent small-molecule inhibitors to drug the undruggable steroid receptor coactivator-3.

Authors:  Xianzhou Song; Jianwei Chen; Mingkun Zhao; Chengwei Zhang; Yang Yu; David M Lonard; Dar-Chone Chow; Timothy Palzkill; Jianming Xu; Bert W O'Malley; Jin Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-15       Impact factor: 11.205

Review 8.  Engineered protein scaffolds as leads for synthetic inhibitors of protein-protein interactions.

Authors:  Michael G Wuo; Paramjit S Arora
Journal:  Curr Opin Chem Biol       Date:  2018-05-24       Impact factor: 8.822

9.  Several inhibitors of the Plk1 Polo-Box Domain turn out to be non-specific protein alkylators.

Authors:  Vincent Archambault; Karine Normandin
Journal:  Cell Cycle       Date:  2017-05-19       Impact factor: 4.534

Review 10.  Development of Protein-Protein Interaction Inhibitors for the Treatment of Infectious Diseases.

Authors:  Andrew F Voter; James L Keck
Journal:  Adv Protein Chem Struct Biol       Date:  2017-08-24       Impact factor: 3.507

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