| Literature DB >> 26246997 |
Francesco Russo1, Johan Gising1, Linda Åkerbladh1, Annette K Roos2, Agata Naworyta3, Sherry L Mowbray2, Anders Sokolowski1, Ian Henderson4, Torey Alling5, Mai A Bailey5, Megan Files5, Tanya Parish5, Anders Karlén1, Mats Larhed6.
Abstract
This is the first report of 5-styryl-oxathiazol-2-ones as inhibitors of the Mycobacterium tuberculosis (Mtb) proteasome. As part of the study, the structure-activity relationship of oxathiazolones as Mtb proteasome inhibitors has been investigated. Furthermore, the prepared compounds displayed a good selectivity profile for Mtb compared to the human proteasome. The 5-styryl-oxathiazol-2-one inhibitors identified showed little activity against replicating Mtb, but were rapidly bactericidal against nonreplicating bacteria. (E)-5-(4-Chlorostyryl)-1,3,4-oxathiazol-2-one) was most effective, reducing the colony-forming units (CFU)/mL below the detection limit in only seven days at all concentrations tested. The results suggest that this new class of Mtb proteasome inhibitors has the potential to be further developed into novel antitubercular agents for synergistic combination therapies with existing drugs.Entities:
Keywords: 5-styryl-oxathiazolones; Mtb proteasome inhibitor; Mycobacterium tuberculosis; antitubercular agents; nonreplicating Mtb; rapid bactericidal activity
Year: 2015 PMID: 26246997 PMCID: PMC4522185 DOI: 10.1002/open.201500001
Source DB: PubMed Journal: ChemistryOpen ISSN: 2191-1363 Impact factor: 2.911
Figure 1Structures of the proteasome inhibitors Bortezomib and oxathiazol-2-one compounds HT1171 and GL5.
Activity, solubility, and stability of proteasome inhibitors.
| Entry | Structure | Cmpd | Method, Yield | Human proteasome IC50 [nM] | Solubility [μM] | Stability [%][a] | |
|---|---|---|---|---|---|---|---|
| 1 | A, 43 % | 1350 | 6200 | 63.8 | 97.4 | ||
| 2 | B, 23 % | 2300 | 4500 | 35.1 | 3.6 | ||
| 3 | B, 23 % | 665 | 15 000 | 30.9 | 15.4 | ||
| 4 | B, 83 % | 630 | 11 000 | 86.2 | 33.5 | ||
| 5 | A, 60 % | >100 000 | >100 000 | — | — | ||
| 6 | A, 27 % | >100 000 | >100 000 | — | — | ||
| 7 | A, 56 % | >100 000 | >100 000 | — | — | ||
| 8 | B, 24 % | 80 500 | 1400 | — | — | ||
| 9 | A, 43 % | >100 000 | 1900 | — | — | ||
| 10 | A, 27 % | >100 000 | >100 000 | — | — | ||
| 11 | A, 39 % | >100 000 | >100 000 | — | — | ||
| 12 | A, 51 % | >100 000 | >100 000 | — | — | ||
| 13 | B, 56 % | >100 000 | 8700 | — | — | ||
| 14 | B, 40 % | >100 000 | 20 000 | — | — | ||
| 15 | B, 71 % | >100 000 | 6700 | — | — | ||
| 16 | B, 58 %[b] | >100 000 | 5800 | — | — | ||
| 17 | B, 40 % | 420 | >100 000 | 19.1 | 38.7 | ||
| 18 | B, 42 % | 640 | >100 000 | 0.1 | n.d. | ||
| 19 | 57 %[c] | 2250 | 2950 | 5.7 | 46.8 | ||
| 20 | B, 24 % | 1035 | 4200 | 24.9 | 89.6 | ||
| 21 | B, 8 % | 27 000 | 9100 | — | — | ||
| 22 | B, 81 % | 38 000 | >100 000 | 44.1 | 79.9 | ||
| 23 | B, 90 % | >100 000 | 14 000 | — | — | ||
| 24 | 49 %[d] | 31 500 | >100 000 | 7.6 | 8.5 | ||
| 25 | 51 %[d,e] | 54 500 | — | 12.3 | — | ||
| 26 | —[f] | >100 000 | >100 000 | — | — | ||
| 27 | —[f] | >100 000 | >100 000 | — | — | ||
| 28 | Bortezomib | — | 135 | (2.56)[g] | — | — |
General method for the synthesis of 5-substituted oxathiazol-2-ones. Method A reagents and conditions: amide (1.0 equiv), chlorocarbonyl sulfenyl chloride (1.5 equiv), 1,4-dioxane (4.0 mL mmol−1), 100 °C MW, 15 min. Method B: amide (1.0 equiv), chlorocarbonyl sulfenyl chloride (2.0 equiv), THF (4.0 mL mmol−1), rt, o/n. [a] Chemical stability in PBS pH 7.4 at 25 °C as % remaining after 24 h. [b] The amide was prepared, and the crude sample was used without further purification. [c] Reagents and conditions: 14 (1.0 mmol), Dess–Martin periodinane (1.1 mmol), CH2Cl2 (5 mL), 0 °C, 2 h. [d] General method for the synthesis of 3-substituted dioxazolones. Reagents and conditions: starting hydroxamic acid (1.0 equiv), 1,1′-carbonyldiimidazole (1.1 equiv), CH3CN (4.0 mL mmol−1), 0 °C, 1 h. [e] The hydroxamic acid was prepared and used as starting material for the dioxazolone synthesis without further purification. [f] Commercially available compound. [g] Literature value.[18] n.d.=not determined.
Scheme 1General synthetic route for the preparation of 5-styryl-oxathiazolones.
Structure–activity relationship of 5-styryl-oxathiazolone inhibitors with the Mtb and human proteasome.
| Entry | Structure | Cmpd | Method, Yield | Human proteasome IC50 [nM] | Solubility [μM] | Stability [%][a] | |
|---|---|---|---|---|---|---|---|
| 1 | C, 75 %; B, 71 % | 1350 | 8500 | 3.9 | 1.5 | ||
| 2 | C, 65 %; B, 66 % | 1700 | 14 500 | 0.4 | 99.8 | ||
| 3 | C, 59 %; B, 43 % | 1000 | >100 000 | 1.1 | 96.0 | ||
| 4 | C, 50 %; B, 43 % | 1080 | >100 000 | 0.1 | 98.2 | ||
| 5 | D; B, 64 %[b] | 780 | >100 000 | 0.2 | 94.8 | ||
| 6 | D, 67 %; B, 69 % | 475 | >100 000 | 0.3 | 91.1 | ||
| 7 | D, 63 %; B, 80 % | 1190 | 87 000 | <2.5 | 96.1 | ||
| 8 | D, 60 %; B, 68 % | 415 | 27 500 | 0.8 | 97.3 | ||
| 9 | D, 49 %; B, 80 % | 1400 | 26 000 | 2.4 | 96.9 | ||
| 10 | D; B, 20 %[b] | 495 | 41 500 | 5.2 | 95.4 | ||
| 11 | D; B, 15 %[b] | 695 | 32 500 | 4.7 | 91.4 | ||
| 12 | D, 68 %; B, 73 % | 565 | >100 000 | 0.3 | 98.2 | ||
| 13 | D; B, 11 %[b] | 785 | 50 000 | 0.1 | 98.5 | ||
| 14 | D; A, 35 %[b] | 1600 | 39 000 | 0.7 | 98.1 | ||
| 15 | E; A, 17 %[b] | 1450 | 32 500 | 5 | 96.4 | ||
| 16 | D; A, 61 %[b] | 1800 | 39 500 | 0.2 | 96.2 | ||
| 17 | D; A, 43 %[b] | 9900 | >100 000 | 7.1 | 96 | ||
| 18 | D; A, 32 %[b] | 22 000 | >100 000 | 1.2 | 94 | ||
| 19 | E; A, 19 %[b] | 68 500 | >100 000 | 0.8 | 98 | ||
| 20 | D; A, 38 %[b] | >100 000 | >100 000 | 0.3 | 95.7 | ||
| 21 | E; A, 32 %[b] | >100 000 | >100 000 | 0.4 | 97.7 |
General method for the synthesis of 2-substituted acrylamide. Method C reagents and conditions: starting aryl iodide (1.0 equiv), acrylamide (2.0 equiv), Pd(OAc)2 (0.05 equiv), tri-tert-butylphosphonium tetrafluoroborate (0.10 equiv), Et3N (3.0 equiv), CH3CN (4.0 mL mmol−1), 120 °C MW, 15 min. Method D reagents and conditions:. starting aryl iodide (1.0 equiv), acrylamide (2.0 equiv) and Pd(OAc)2 (0.05 equiv), Et3N (3.0 equiv), CH3CN (4.0 mL mmol−1), 120 °C MW, 15 min. Method E reagents and conditions: starting aryl bromide (1.0 equiv), acrylamide (1.5 equiv) and trans-bis(acetato)bis[o-(di-o-tolylphosphino)benzyl]dipalladium(II) (0.05 equiv), NaOAc (3.0 equiv), DMF (4.0 mL mmol−1), 140 °C MW, 15 min. [a] Chemical stability in PBS pH 7.4 at 25 °C; as % remaining after 24 h. [b] Isolated yield over two steps.
Optimization of 5-styryl-oxathiazolone inhibitors with regard to solubility.
| Entry | Structure | Cmpd | Method, Yield | Human proteasome IC50 [nM] | Solubility [μM] | Stability [%][a] | |
|---|---|---|---|---|---|---|---|
| 1 | D; B, 7 %[b] | 2750 | 77 000 | 84.7 | 91.6 | ||
| 2 | D; A, 39 %[b] | 15 000 | 29 500 | 2.1 | 97.7 | ||
| 3 | C, 46 %; B, 45 % | 2100 | 18 500 | 22.6 | 97.6 | ||
| 4 | C, 75 %; B, 53 % | 1150 | 11 300 | 19.7 | 99.1 | ||
| 5 | C; B, 5 %[b] | 735 | 3300 | 56.1 | 88.9 | ||
| 6 | E; A, 3 %[b] | 2350 | >10 000[c] | 64.6 | n.d. | ||
| 7 | E; A, 15 %[b] | 1350 | >10 000[c] | 70.6 | n.d. | ||
| 8 | E; B, 4 %[b] | 2100 | >10 000[c] | 2.4 | n.d. | ||
| 9 | –, 31 %;[d] B, 12 % | 1200 | 5000 | 4.1 | n.d. |
General method for the synthesis of 2-substituted acrylamides. Method C reagents and conditions: starting aryl iodide (1.0 equiv), acrylamide (2.0 equiv), Pd(OAc)2 (0.05 equiv), tri-tert-butylphosphonium tetrafluoroborate (0.10 equiv), Et3N (3.0 equiv), CH3CN (4.0 mL mmol−1), 120 °C MW, 15 min. Method D reagents and conditions:. starting aryl iodide (1.0 equiv), acrylamide (2.0 equiv) and Pd(OAc)2 (0.05 equiv), Et3N (3.0 equiv), CH3CN (4.0 mL mmol−1), 120 °C MW, 15 min. Method E reagents and conditions: starting aryl bromide (1.0 equiv), acrylamide (1.5 equiv) and trans-bis(acetato)bis[o-(di-o-tolylphosphino)benzyl]dipalladium(II) (0.05 equiv), NaOAc (3.0 equiv), DMF (4.0 mL mmol−1), 140 °C MW, 15 min. [a] Chemical stability in PBS pH 7.4 at 25 °C; as % remaining after 24 h. [b] Isolated yield over two steps. [c] The compound interferes with the assay at 10 μm, therefore it was not possible to measure human proteasome inhibition. [d] Reagents and conditions: 1) (2E)-3-(1H-Indolyl-3-yl)acrylic acid (2.0 mmol), 1,1′-carbonyldiimidazole (2.0 mmol), DMF (10 mL), rt, 30 min, 2) NH4HCO3 (4.0 mmol), rt, o/n.
Activity of compounds against actively-replicating Mtb.
| Entry | Cmpd | OD-MIC [μ | OD-inhib. at 20 μ | RFU-MIC [μ | RFU-inhib. at 20 μ | Vero cell cytotoxicity TC50 [μ |
|---|---|---|---|---|---|---|
| 1 | >20 | 33 | >20 | 32 | 12 | |
| 2 | inactive | inactive | 18 | |||
| 3 | >20 | 27 | >20 | 30 | 11 | |
| 4 | >20 | 22 | >20 | 24 | 21 | |
| 5 | >20 | 22 | >20 | 27 | 22 | |
| 6 | >20 | 28 | >20 | n.d. | 41 | |
| 7 | inactive | inactive | 19 | |||
| 8 | inactive | inactive | 21 | |||
| 9 | >20 | 33 | >20 | 30 | n.d. | |
| 10 | inactive | inactive | 17 | |||
| 11 | >20 | 41 | >20 | 43 | 21 | |
| 12 | >20 | 41 | >20 | 46 | 17 | |
| 13 | inactive | inactive | 20 | |||
| 14 | >20 | 45 | >20 | 45 | n.d. | |
| 15 | >20 | 83 | >20 | 85 | 16 | |
| 16 | >20 | 33 | >20 | 30 | n.d. | |
| 17 | >20 | 48 | >20 | 45 | n.d. | |
| 18 | >20 | 36 | >20 | 35 | n.d. | |
| 19 | >20 | 32 | >20 | 32 | n.d. | |
| 20 | >20 | 36 | >20 | 36 | n.d. | |
| 21 | inactive | inactive | n.d. | |||
| 22 | >20 | 35 | >20 | 32 | n.d. | |
| 23 | >20 | 26 | >20 | 24 | n.d. | |
| 24 | >20 | 24 | >20 | 27 | n.d. | |
| 25 | >20 | 27 | >20 | 39 | n.d. | |
| 26 | inactive | inactive | n.d. | |||
| 27 | inactive | inactive | n.d. | |||
| 28 | inactive | inactive | n.d. | |||
| 29 | inactive | inactive | n.d. | |||
| 30 | Isoniazid[a] | 0.3 | 0.3 | n.d. | ||
| 31 | Ethambutol[a] | 6.5 | 6.6 | n.d. | ||
| 32 | Ofloxacin[a] | 1.2 | 1.3 | n.d. |
The minimum inhibitory concentration (MIC) was determined against aerobically-grown Mtb H37Rv using a 10-point serial dilution by optical density (OD) and relative fluorescence units (RFU) measurement. The highest concentration of compound tested was 20 μm. The % growth was plotted, and a curve was fitted using the Gompertz fit. The MIC was defined as the minimum concentration at which growth was completely inhibited and was calculated from the inflection point of the fitted curve to the lower asymptote (zero growth). The % inhibition of growth at 20 μm is given. Compounds defined as inactive gave % inhibition <20 at 20 μm. Cytotoxicity was measured against the Vero cell line; the TC50 is the concentration required to inhibit growth by 50 % over 48 h. n.d.=not determined. [a] Known antitubercular agents were used as reference compounds.3
Figure 25-Styryl-oxathiazol-2-ones are bactericidal against nonreplicating Mycobacterium tuberculosis (Mtb). Mtb was grown aerobically, washed, and resuspended in PBS-tyloxapol for 14 d. Compounds were added with the indicated concentrations. Colony forming units (CFU) were determined by plating serial dilutions. The lower limit of detection (LoD) is indicated.
Figure 3gHSQC and gHMQC experiment results of compound 56.