Literature DB >> 26243783

Novel Poxvirus Infection in an Immune Suppressed Patient.

Nelli S Lakis1, Yu Li2, Jerrold L Abraham1, Chris Upton3, Donald C Blair4, Scott Smith2, Hui Zhao2, Inger K Damon2.   

Abstract

BACKGROUND: Human and animal poxvirus infections are being reported with increasing frequency. We describe a challenging case history and treatment of a previously unknown poxvirus rash illness in a renal transplant patient.
METHODS: A combination of classical microbiology techniques, including viral culture and electron microscopy, were used to provide initial clinical diagnosis. Subsequent standard polymerase chain reaction assays available in 2001 were noncontributory. Next generation sequencing was used to provide definitive diagnosis.
RESULTS: Retrospectively, next generation sequencing methods were used to ultimately provide the definitive diagnosis of a novel poxvirus infection initially identified by electron microscopy. The closest relative of this poxvirus, identified in North America, is a poxvirus collected from a mosquito pool from Central Africa in 1972.
CONCLUSIONS: This diagnostic quandary was ultimately solved using next generation DNA sequencing. This article describes the use of classical and next generation diagnostic strategies to identify etiologic agents of emerging infectious diseases and once again demonstrates the susceptibility of immunossupressed patients to novel pathogens. The virus identified is closely related to Yoka virus; these viruses appear to have independently diverged from a common ancestor of all known orthopoxviruses. Published by Oxford University Press on behalf of the Infectious Diseases Society of America 2015. This work is written by (a) US Government employee(s) and is in the public domain in the US.

Entities:  

Keywords:  immunosupression; pathology; poxvirus

Mesh:

Year:  2015        PMID: 26243783     DOI: 10.1093/cid/civ643

Source DB:  PubMed          Journal:  Clin Infect Dis        ISSN: 1058-4838            Impact factor:   9.079


  9 in total

Review 1.  The Human Virome: Implications for Clinical Practice in Transplantation Medicine.

Authors:  Susanna K Tan; David A Relman; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2017-07-19       Impact factor: 5.948

2.  Virome Diversity among Mosquito Populations in a Sub-Urban Region of Marseille, France.

Authors:  Amira Nebbak; Sonia Monteil-Bouchard; Jean-Michel Berenger; Lionel Almeras; Philippe Parola; Christelle Desnues
Journal:  Viruses       Date:  2021-04-27       Impact factor: 5.048

3.  Two novel poxviruses with unusual genome rearrangements: NY_014 and Murmansk.

Authors:  Chad Smithson; Hermann Meyer; Crystal M Gigante; Jinxin Gao; Hui Zhao; Dhwani Batra; Inger Damon; Chris Upton; Yu Li
Journal:  Virus Genes       Date:  2017-07-31       Impact factor: 2.198

4.  Novel Orthopoxvirus Infection in an Alaska Resident.

Authors:  Yuri P Springer; Christopher H Hsu; Zachary R Werle; Link E Olson; Michael P Cooper; Louisa J Castrodale; Nisha Fowler; Andrea M McCollum; Cynthia S Goldsmith; Ginny L Emerson; Kimberly Wilkins; Jeffrey B Doty; Jillybeth Burgado; JinXin Gao; Nishi Patel; Matthew R Mauldin; Mary G Reynolds; Panayampalli S Satheshkumar; Whitni Davidson; Yu Li; Joseph B McLaughlin
Journal:  Clin Infect Dis       Date:  2017-06-15       Impact factor: 9.079

Review 5.  Virus detection by transmission electron microscopy: Still useful for diagnosis and a plus for biosafety.

Authors:  Philippe Roingeard; Pierre-Ivan Raynal; Sébastien Eymieux; Emmanuelle Blanchard
Journal:  Rev Med Virol       Date:  2018-11-09       Impact factor: 6.989

6.  The genomes of three North American orthopoxviruses.

Authors:  Chad Smithson; Nick Tang; Scott Sammons; Mike Frace; Dhwani Batra; Yu Li; Ginny L Emerson; Darin S Carroll; Chris Upton
Journal:  Virus Genes       Date:  2016-09-09       Impact factor: 2.198

7.  Fatal Outbreak in Tonkean Macaques Caused by Possibly Novel Orthopoxvirus, Italy, January 2015 1.

Authors:  Giusy Cardeti; Cesare Ernesto Maria Gruber; Claudia Eleni; Fabrizio Carletti; Concetta Castilletti; Giuseppe Manna; Francesca Rosone; Emanuela Giombini; Marina Selleri; Daniele Lapa; Vincenzo Puro; Antonino Di Caro; Raniero Lorenzetti; Maria Teresa Scicluna; Goffredo Grifoni; Annapaola Rizzoli; Valentina Tagliapietra; Lorenzo De Marco; Maria Rosaria Capobianchi; Gian Luca Autorino
Journal:  Emerg Infect Dis       Date:  2017-12-17       Impact factor: 6.883

8.  Re-Assembly and Analysis of an Ancient Variola Virus Genome.

Authors:  Chad Smithson; Jacob Imbery; Chris Upton
Journal:  Viruses       Date:  2017-09-08       Impact factor: 5.048

9.  Genome of Alaskapox Virus, A Novel Orthopoxvirus Isolated from Alaska.

Authors:  Crystal M Gigante; Jinxin Gao; Shiyuyun Tang; Andrea M McCollum; Kimberly Wilkins; Mary G Reynolds; Whitni Davidson; Joseph McLaughlin; Victoria A Olson; Yu Li
Journal:  Viruses       Date:  2019-08-01       Impact factor: 5.048

  9 in total

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