Literature DB >> 26238401

Expansion of CRISPR/Cas9 genome targeting sites in zebrafish by Csy4-based RNA processing.

Wei Qin1,2, Fang Liang1, Yan Feng1, Haipeng Bai1, Ruibin Yan2, Song Li1,2, Shuo Lin1,3.   

Abstract

Entities:  

Mesh：

Substances：

Year:  2015        PMID： 26238401      PMCID： PMC4559817          DOI： 10.1038/cr.2015.95

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


× No keyword cloud information.
  12 in total

1.  Mechanism of substrate selection by a highly specific CRISPR endoribonuclease.

Authors:  Samuel H Sternberg; Rachel E Haurwitz; Jennifer A Doudna
Journal:  RNA       Date:  2012-02-16       Impact factor: 4.942

2.  Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA.

Authors:  Rachel E Haurwitz; Samuel H Sternberg; Jennifer A Doudna
Journal:  EMBO J       Date:  2012-04-20       Impact factor: 11.598

3.  Mind bomb is a ubiquitin ligase that is essential for efficient activation of Notch signaling by Delta.

Authors:  Motoyuki Itoh; Cheol-Hee Kim; Gregory Palardy; Takaya Oda; Yun-Jin Jiang; Donovan Maust; Sang-Yeob Yeo; Kevin Lorick; Gavin J Wright; Linda Ariza-McNaughton; Allan M Weissman; Julian Lewis; Settara C Chandrasekharappa; Ajay B Chitnis
Journal:  Dev Cell       Date:  2003-01       Impact factor: 12.270

4.  A zebrafish model for hepatoerythropoietic porphyria.

Authors:  H Wang; Q Long; S D Marty; S Sassa; S Lin
Journal:  Nat Genet       Date:  1998-11       Impact factor: 38.330

Review 5.  ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.

Authors:  Thomas Gaj; Charles A Gersbach; Carlos F Barbas
Journal:  Trends Biotechnol       Date:  2013-05-09       Impact factor: 19.536

6.  Sequence- and structure-specific RNA processing by a CRISPR endonuclease.

Authors:  Rachel E Haurwitz; Martin Jinek; Blake Wiedenheft; Kaihong Zhou; Jennifer A Doudna
Journal:  Science       Date:  2010-09-10       Impact factor: 47.728

7.  Efficient genome editing in zebrafish using a CRISPR-Cas system.

Authors:  Woong Y Hwang; Yanfang Fu; Deepak Reyon; Morgan L Maeder; Shengdar Q Tsai; Jeffry D Sander; Randall T Peterson; J-R Joanna Yeh; J Keith Joung
Journal:  Nat Biotechnol       Date:  2013-01-29       Impact factor: 54.908

8.  In vivo genome editing using a high-efficiency TALEN system.

Authors:  Victoria M Bedell; Ying Wang; Jarryd M Campbell; Tanya L Poshusta; Colby G Starker; Randall G Krug; Wenfang Tan; Sumedha G Penheiter; Alvin C Ma; Anskar Y H Leung; Scott C Fahrenkrug; Daniel F Carlson; Daniel F Voytas; Karl J Clark; Jeffrey J Essner; Stephen C Ekker
Journal:  Nature       Date:  2012-09-23       Impact factor: 49.962

9.  Heritable and precise zebrafish genome editing using a CRISPR-Cas system.

Authors:  Woong Y Hwang; Yanfang Fu; Deepak Reyon; Morgan L Maeder; Prakriti Kaini; Jeffry D Sander; J Keith Joung; Randall T Peterson; Jing-Ruey Joanna Yeh
Journal:  PLoS One       Date:  2013-07-09       Impact factor: 3.240

10.  Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.

Authors:  James A Gagnon; Eivind Valen; Summer B Thyme; Peng Huang; Laila Akhmetova; Laila Ahkmetova; Andrea Pauli; Tessa G Montague; Steven Zimmerman; Constance Richter; Alexander F Schier
Journal:  PLoS One       Date:  2014-05-29       Impact factor: 3.240
View more
  12 in total

1.  A high-throughput functional genomics workflow based on CRISPR/Cas9-mediated targeted mutagenesis in zebrafish.

Authors:  Gaurav K Varshney; Blake Carrington; Wuhong Pei; Kevin Bishop; Zelin Chen; Chunxin Fan; Lisha Xu; Marypat Jones; Matthew C LaFave; Johan Ledin; Raman Sood; Shawn M Burgess
Journal:  Nat Protoc       Date:  2016-10-27       Impact factor: 13.491

2.  Efficient gene editing in a medaka (Oryzias latipes) cell line and embryos by SpCas9/tRNA-gRNA.

Authors:  Qihua Pan; Junzhi Luo; Yuewen Jiang; Zhi Wang; Ke Lu; Tiansheng Chen
Journal:  J Zhejiang Univ Sci B       Date:  2022-01-15       Impact factor: 3.066

3.  CRISPRz: a database of zebrafish validated sgRNAs.

Authors:  Gaurav K Varshney; Suiyuan Zhang; Wuhong Pei; Ashrifia Adomako-Ankomah; Jacob Fohtung; Katherine Schaffer; Blake Carrington; Anoo Maskeri; Claire Slevin; Tyra Wolfsberg; Johan Ledin; Raman Sood; Shawn M Burgess
Journal:  Nucleic Acids Res       Date:  2015-10-04       Impact factor: 16.971

4.  Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis.

Authors:  Raymond Teck Ho Lee; Ashley Shu Mei Ng; Philip W Ingham
Journal:  PLoS One       Date:  2016-11-10       Impact factor: 3.240

Review 5.  How to Train a Cell-Cutting-Edge Molecular Tools.

Authors:  Jakub Czapiński; Michał Kiełbus; Joanna Kałafut; Michał Kos; Andrzej Stepulak; Adolfo Rivero-Müller
Journal:  Front Chem       Date:  2017-03-10       Impact factor: 5.221

6.  A tRNA-based multiplex sgRNA expression system in zebrafish and its application to generation of transgenic albino fish.

Authors:  Tomoya Shiraki; Koichi Kawakami
Journal:  Sci Rep       Date:  2018-09-06       Impact factor: 4.379

Review 7.  Genome Editing and Its Applications in Model Organisms.

Authors:  Dongyuan Ma; Feng Liu
Journal:  Genomics Proteomics Bioinformatics       Date:  2016-01-04       Impact factor: 7.691

8.  Expanding CRISPR/Cas9 Genome Editing Capacity in Zebrafish Using SaCas9.

Authors:  Yan Feng; Cheng Chen; Yuxiang Han; Zelin Chen; Xiaochan Lu; Fang Liang; Song Li; Wei Qin; Shuo Lin
Journal:  G3 (Bethesda)       Date:  2016-08-09       Impact factor: 3.154

9.  Multiplex CRISPR/Cas9-based genome engineering enhanced by Drosha-mediated sgRNA-shRNA structure.

Authors:  Qiang Yan; Kun Xu; Jiani Xing; Tingting Zhang; Xin Wang; Zehui Wei; Chonghua Ren; Zhongtian Liu; Simin Shao; Zhiying Zhang
Journal:  Sci Rep       Date:  2016-12-12       Impact factor: 4.379

10.  CRISPR/Cas9-mediated precise genome modification by a long ssDNA template in zebrafish.

Authors:  Haipeng Bai; Lijun Liu; Ke An; Xiaochan Lu; Michael Harrison; Yanqiu Zhao; Ruibin Yan; Zhijie Lu; Song Li; Shuo Lin; Fang Liang; Wei Qin
Journal:  BMC Genomics       Date:  2020-01-21       Impact factor: 3.969
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.