Literature DB >> 26237057

Comparative Biochemical and Proteomic Analyses of Soybean Seed Cultivars Differing in Protein and Oil Content.

Chul Woo Min1, Ravi Gupta1, So Wun Kim1, So Eui Lee1, Yong Chul Kim1, Dong Won Bae2, Won Young Han3, Byong Won Lee3, Jong Min Ko3, Ganesh Kumar Agrawal4,5, Randeep Rakwal4,5, Sun Tae Kim1.   

Abstract

This study develops differential protein profiles of soybean (Glycine max) seeds (cv. Saedanbaek and Daewon) varying in protein (47.9 and 39.2%) and oil (16.3 and 19.7%) content using protamine sulfate (PS) precipitation method coupled with a 2D gel electrophoresis (2DGE) approach. Of 71 detected differential spots between Daewon and Saedanbaek, 48 were successfully identified by MALDI-TOF/TOF. Gene ontology analysis revealed that up-regulated proteins in Saedanbaek were largely associated with nutrient reservoir activity (42.6%), which included mainly seed-storage proteins (SSPs; subunits of glycinin and β-conglycinin). Similar results were also obtained in two cultivars of wild soybean (G. soja cv. WS22 and WS15) differing in protein content. Western blots confirmed higher accumulation of SSPs in protein-rich Saedanbaek. Findings presented and discussed in this study highlight a possible involvement of the urea cycle for increased accumulation of SSPs and hence the higher protein content in soybean seeds.

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Keywords:  2D gel electrophoresis; Glycine max; Glycine soja; MALDI-TOF/TOF; protamine sulfate precipitation method; seed-storage proteins

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Year:  2015        PMID: 26237057     DOI: 10.1021/acs.jafc.5b03196

Source DB:  PubMed          Journal:  J Agric Food Chem        ISSN: 0021-8561            Impact factor:   5.279


  7 in total

1.  In-Depth Investigation of Low-Abundance Proteins in Matured and Filling Stages Seeds of Glycine max Employing a Combination of Protamine Sulfate Precipitation and TMT-Based Quantitative Proteomic Analysis.

Authors:  Cheol Woo Min; Joonho Park; Jin Woo Bae; Ganesh Kumar Agrawal; Randeep Rakwal; Youngsoo Kim; Pingfang Yang; Sun Tae Kim; Ravi Gupta
Journal:  Cells       Date:  2020-06-22       Impact factor: 6.600

2.  An integrated omics analysis reveals molecular mechanisms that are associated with differences in seed oil content between Glycine max and Brassica napus.

Authors:  Zhibin Zhang; Jim M Dunwell; Yuan-Ming Zhang
Journal:  BMC Plant Biol       Date:  2018-12-04       Impact factor: 4.215

3.  Black soybeans protect human keratinocytes from oxidative stress-induced cell death.

Authors:  Young Yoon; Yoon-Mi Lee; Sooji Song; Yu Young Lee; Kyung-Jin Yeum
Journal:  Food Sci Nutr       Date:  2018-10-20       Impact factor: 2.863

Review 4.  Bringing New Methods to the Seed Proteomics Platform: Challenges and Perspectives.

Authors:  Galina Smolikova; Daria Gorbach; Elena Lukasheva; Gregory Mavropolo-Stolyarenko; Tatiana Bilova; Alena Soboleva; Alexander Tsarev; Ekaterina Romanovskaya; Ekaterina Podolskaya; Vladimir Zhukov; Igor Tikhonovich; Sergei Medvedev; Wolfgang Hoehenwarter; Andrej Frolov
Journal:  Int J Mol Sci       Date:  2020-12-01       Impact factor: 5.923

Review 5.  Soybean genetic resources contributing to sustainable protein production.

Authors:  Bingfu Guo; Liping Sun; Honglei Ren; Rujian Sun; Zhongyan Wei; Huilong Hong; Xiaoyan Luan; Xiaobo Wang; Donghe Xu; Wenbin Li; Li-Juan Qiu
Journal:  Theor Appl Genet       Date:  2022-10-14       Impact factor: 5.574

6.  An Integrated Biochemical, Proteomics, and Metabolomics Approach for Supporting Medicinal Value of Panax ginseng Fruits.

Authors:  So W Kim; Ravi Gupta; Seo H Lee; Cheol W Min; Ganesh K Agrawal; Randeep Rakwal; Jong B Kim; Ick H Jo; Soo-Yun Park; Jae K Kim; Young-Chang Kim; Kyong H Bang; Sun T Kim
Journal:  Front Plant Sci       Date:  2016-07-04       Impact factor: 5.753

7.  Expect the Unexpected Enrichment of "Hidden Proteome" of Seeds and Tubers by Depletion of Storage Proteins.

Authors:  Ravi Gupta; Cheol W Min; Yiming Wang; Yong C Kim; Ganesh K Agrawal; Randeep Rakwal; Sun T Kim
Journal:  Front Plant Sci       Date:  2016-06-01       Impact factor: 5.753

  7 in total

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