| Literature DB >> 26231751 |
Vincent P Diego1, Raquel Nichele de Chaves2,3, John Blangero4, Michele Caroline de Souza5, Daniel Santos6, Thayse Natacha Gomes7, Fernanda Karina dos Santos8,9, Rui Garganta10, Peter T Katzmarzyk11, José A R Maia12.
Abstract
BACKGROUND: The objective of this study is to present a model to estimate sex-specific genetic effects on physical activity (PA) levels and sedentary behaviour (SB) using three generation families.Entities:
Mesh:
Year: 2015 PMID: 26231751 PMCID: PMC4557754 DOI: 10.1186/s12881-015-0207-9
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.023
Descriptive statistics for age, physical activity levels and sedentary behaviour by generation and sex
| 1st Generation | 2nd Generation | 3rd Generation | |||||
|---|---|---|---|---|---|---|---|
| Grandfather | Grandmother | Father | Mother | Son | Daughter | ||
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| VARIABLES | |||||||
| Mean ± sd | Mean ± sd | Mean ± sd | |||||
| Age (years) | 74.4 ± 10.7 | 76.4 ± 7.6 | 41.9 ± 5.2 | 40.9 ± 4.9 | 13.6 ± 2,4 | 13.3 ± 2.5 | |
| Median (IQR) | Median (IQR) | Median (IQR) | |||||
| VPA (mets/min/week) | 0 (0) | 0 (0) | 0 (320) | 0 (160) | 280 (960) | 80 (640) | |
| MPA (mets/min/week) | 0 (80) | 0 (0) | 140 (400) | 160 (360) | 280 (620) | 240 (480) | |
| WK (mets/min/week) | 330 (297) | 247,5 (256) | 743 (660) | 660 (561) | 718 (1068) | 743 (990) | |
| SB | ST (min/day) | 420 (180) | 420 (120) | 300 (120) | 300 (120) | 360 (120) | 360 (120) |
| WT (min/day) | 155 (138) | 180 (120) | 80 (75) | 80 (60) | 92,5 (80) | 105 (60) | |
| TPA (mets/min/week) | 413 (291) | 264 (346) | 1058 (923) | 1015 (913) | 1722,25 (1571) | 1545 (1435) | |
sd: standard deviation; IQR: interquartile range; VPA: vigorous physical activity; MPA: moderate physical activity; WK: walking; SB: sedentary behaviour; ST: sitting time; WT: watching television; TPA: total physical activity
Heritability estimates (h2), standard errors (se), p-values and explained variance by covariates
| Trait | h2 ± se | p-value | Variance explained by covariates (%)a |
|---|---|---|---|
| VPA | 0.280 ± 0.061 | 1.0 × 10−7 | 2.0 |
| MPA | 0.312 ± 0.060 | 2.4 × 10−9 | 8.0 |
| WK | 0.456 ± 0.058 | 3.1 × 10−18 | 15.0 |
| ST | 0.287 ± 0.059 | 4.1 × 10−8 | 16.0 |
| WT | 0.112 ± 0.061 | 2.5 × 10−2 | 30.0 |
| TPA | 0.284 ± 0.059 | 3.4 × 10−8 | 10.0 |
VPA: vigorous physical activity; MPA: moderate physical activity; WK: walking; ST: sitting time; WT: watching television; TPA: total physical activity. Covariates in the regression models included age, sex, age2, sex*age, sex*age2
P-values for genotype-by-sex interaction effects
| Null hypothesis test: | |||
|---|---|---|---|
| Trait | Equal sex-specific additive genetic variances | Genetic correlation coefficient equal to 1 | Equal sex-specific residual environmental variances |
| VPA | 0.0005 | 0.08 | 0.006 |
| MPA | 0.33 | 0.18 | 0.02 |
| WK | 0.78 | 0.36 | 0.27 |
| ST | 0.27 | 0.50 | 0.65 |
| WT | 0.02 | 0.23 | 0.10 |
| TPA | 0.24 | 0.20 | 0.001 |
VPA: vigorous physical activity; MPA: moderate physical activity; WK: walking; ST: sitting time; WT: watching television; TPA: total physical activity
Sex-specific heritabilities
| Trait | % h2 (95 % CI) | % h2 (95 % CI) | Δh2 (95 % CI)a |
|---|---|---|---|
| Males | Females | ||
| VPA | 51.364 (29.75, 72.25) | 32.004 (9.8, 55.59) | 19.3 (−13.4, 50.7) |
| MPA | 35.477 (13.3, 58.6) | 39.938 (18.4, 62) | −4.461 (−36.1, 27.2) |
| TPA | 32.931 (12.28, 54.4) | 37.909 (17.03, 59.44) | −4.978 (−35.8, 25.6) |
| WT | 45.293 (18.9, 72.25) | 2.8 (−20.916, 26.516) | 42.485 (6.4, 70.4) |
aΔh2 = male % h2 – female % h2. The null hypothesis that Δh2 = 0 is equivalent to the null hypothesis that the sex-specific heritabilities are equal
VPA: vigorous physical activity; MPA: moderate physical activity; WK: walking; ST: sitting time; TPA: total physical activity; WT: watching television
Fig. 1Genotype × sex interaction effects and sex-specific heritabilities for VPA and WT. a. VPA. b. WT. Parameter estimates on the vertical axis plotted against sex on the horizontal axis. Male and female sexes are coded respectively as 1 and 2. Additive genetic and environmental standard deviations (gsd and esd, respectively) are respectively given by the solid and dot-dashed lines, and sex-specific heritabilities (h2) are given by the dotted lines
Statistical power analysis for the trait-specific parameters
| Trait | Power or probability of rejecting a false null hypothesis for the following null hypotheses for genotype × sex interaction | |
|---|---|---|
| VPA | 0.93558 | 0.39621 |
| MPA | 0.16386 | 0.24019 |
| WK | 0.05925 | 0.12345 |
| ST | 0.19644 | 0.1 |
| WT | 0.67527 | 1 |
| TPA | 0.22014 | 0.22074 |
Sex-specific heritabilities of different physical activity phenotypes in twin studies
| Author | Ano | Country | Trait | % h2 (95 % CI) | % h2 (95 % CI) |
|---|---|---|---|---|---|
| Males | Females | ||||
| Boomsma et al. [ | 1989 | Netherlands | SP | 77 (NA) | 35 (NA) |
| Beunen & Thomis [ | 1999 | Belgium | SP | 44 (21–91) | 83 (66–91) |
| Maia et al. [ | 2002 | Portugal | LTPA | 66 (48.9-73.3) | 32 (0.4-61.8) |
| Maia et al. [ | 2002 | Portugal | SPI | 68.4 (41.5-89.2) | 39.8 (0.4-73.0) |
| Carlsson et al.[ | 2006 | Sweden | LTPA | 64 (55–72) | 51 (48–60) |
| (14–28 yrs) | |||||
| Carlsson et al.[ | 2006 | Sweden | LTPA | 40 (30–45) | 41 (30–45) |
| (29–46 yrs) | |||||
| Stubbe et al. [ | 2006 | Australia | EP | 22.9 (0–56.1) | 31.1 (0.3-55.6) |
| Stubbe et al.[ | 2006 | Denmark | EP | 44 (24.2- 55.7) | 50.1 (30.3-57.7) |
| Stubbe et al.[ | 2006 | Finland | EP | 55.8 (38.4-63.3) | 61 (44.5-66.3) |
| Stubbe et al.[ | 2006 | Netherlands | EP | 68.1 (34.2-79.0) | 50.3 (21.3-70.3) |
| Stubbe et al.[ | 2006 | Norway | EP | 33.6 (6.7-61.7) | 56.6 (46.5-63.8) |
| Stubbe et al.[ | 2006 | Sweden | EP | 63.9 (52.1-68.6) | 59.5 (46.9-64.7) |
| Aaltonen et al.[ | 2010 | Finland | LTPA | 53 (44–60) | 38 (28–40) |
h2: heritability; CI: confidence intervals; SP: sport participation; LTPA: leisure-time physical activity; SPI: sport participation index; EP: exercise participation