Literature DB >> 26224872

Integrative Protein-Based Prognostic Model for Early-Stage Endometrioid Endometrial Cancer.

Ji-Yeon Yang1, Henrica M J Werner2, Jie Li3, Shannon N Westin4, Yiling Lu3, Mari K Halle2, Jone Trovik2, Helga B Salvesen2, Gordon B Mills5, Han Liang6.   

Abstract

PURPOSE: Endometrioid endometrial carcinoma (EEC) is the major histologic type of endometrial cancer, the most prevalent gynecologic malignancy in the United States. EEC recurrence or metastasis is associated with a poor prognosis. Early-stage EEC is generally curable, but a subset has high risk of recurrence or metastasis. Prognosis estimation for early-stage EEC mainly relies on clinicopathologic characteristics, but is unreliable. We aimed to identify patients with high-risk early-stage EEC who are most likely to benefit from more extensive surgery and adjuvant therapy by building a prognostic model that integrates clinical variables and protein markers. EXPERIMENTAL
DESIGN: We used two large, independent early-stage EEC datasets as training (n = 183) and validation cohorts (n = 333), and generated the levels of 186 proteins and phosphoproteins using reverse-phase protein arrays. By applying an initial filtering and the elastic net to the training samples, we developed a prognostic model for overall survival containing two clinical variables and 18 protein markers and optimized the risk group classification.
RESULTS: The Kaplan-Meier survival analyses in the validation cohort confirmed an improved discriminating power of our prognostic model for patients with early-stage EEC over key clinical variables (log-rank test, P = 0.565 for disease stage, 0.567 for tumor grade, and 1.3 × 10(-4) for the integrative model). Compared with clinical variables (stage, grade, and patient age), only the risk groups defined by the integrative model were consistently significant in both univariate and multivariate analyses across both cohorts.
CONCLUSIONS: Our prognostic model is potentially of high clinical value for stratifying patients with early-stage EEC and improving their treatment strategies. ©2015 American Association for Cancer Research.

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Year:  2015        PMID: 26224872      PMCID: PMC4715969          DOI: 10.1158/1078-0432.CCR-15-0104

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  38 in total

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4.  Expression of the epidermal growth factor receptor and Her-2 are predictors of favorable outcome and reduced complete response rates, respectively, in patients with muscle-invading bladder cancers treated by concurrent radiation and cisplatin-based chemotherapy: a report from the Radiation Therapy Oncology Group.

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Authors:  Qi-qiang Long; Yong-xiang Yi; Jie Qiu; Chuan-jun Xu; Pei-lin Huang
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Review 7.  Promising novel therapies for the treatment of endometrial cancer.

Authors:  Paola A Gehrig; Victoria L Bae-Jump
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8.  Prognostic impact of fatty acid synthase expression in upper urinary tract urothelial carcinoma.

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9.  Integrated genomic analyses of ovarian carcinoma.

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Journal:  Nature       Date:  2011-06-29       Impact factor: 49.962

10.  Assessing the clinical utility of cancer genomic and proteomic data across tumor types.

Authors:  Yuan Yuan; Eliezer M Van Allen; Larsson Omberg; Nikhil Wagle; Ali Amin-Mansour; Artem Sokolov; Lauren A Byers; Yanxun Xu; Kenneth R Hess; Lixia Diao; Leng Han; Xuelin Huang; Michael S Lawrence; John N Weinstein; Josh M Stuart; Gordon B Mills; Levi A Garraway; Adam A Margolin; Gad Getz; Han Liang
Journal:  Nat Biotechnol       Date:  2014-06-22       Impact factor: 54.908

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1.  Characterization of Human Cancer Cell Lines by Reverse-phase Protein Arrays.

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Journal:  Cancer Cell       Date:  2017-02-13       Impact factor: 31.743

2.  Exploration of DNA methylation markers for diagnosis and prognosis of patients with endometrial cancer.

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Journal:  Epigenetics       Date:  2018-07-30       Impact factor: 4.528

3.  A seven-m6A regulator-related CpG site-based prognostic signature for endometrial carcinoma.

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4.  Pancancer modelling predicts the context-specific impact of somatic mutations on transcriptional programs.

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Journal:  Nat Commun       Date:  2017-01-31       Impact factor: 14.919

5.  Predicting high-risk endometrioid carcinomas using proteins.

Authors:  Di Du; Wencai Ma; Melinda S Yates; Tao Chen; Karen H Lu; Yiling Lu; John N Weinstein; Russell R Broaddus; Gordon B Mills; Yuexin Liu
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6.  Establishment of a nine-gene prognostic model for predicting overall survival of patients with endometrial carcinoma.

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7.  Identification of prognosis markers for endometrial cancer by integrated analysis of DNA methylation and RNA-Seq data.

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8.  Construction of a nine DNA repair-related gene prognostic classifier to predict prognosis in patients with endometrial carcinoma.

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9.  Prediction of Clinical Outcome in Endometrial Carcinoma Based on a 3-lncRNA Signature.

Authors:  Hongmei Ding; Fei Jiang; Lifeng Deng; Juan Wang; Ping Wang; Mintao Ji; Jie Li; Weiqiang Shi; Yufang Pei; Jiafu Li; Yue Zhang; Zengli Zhang; Youguo Chen; Bingyan Li
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10.  Novel miRNA markers for the diagnosis and prognosis of endometrial cancer.

Authors:  Qian Wang; Kai Xu; Yu Tong; Xianning Dai; Teng Xu; Danna He; Jianchao Ying
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  10 in total

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