Literature DB >> 26221763

The emerging role of long non-coding RNAs in HIV infection.

Daniel C Lazar1, Kevin V Morris2, Sheena M Saayman3.   

Abstract

The discovery of long non-coding RNAs (lncRNAs) and the elucidation of the mechanisms by which they affect different disease states are providing researchers with a better understanding of a wide array of disease pathways. Moreover, lncRNAs are presenting themselves as both unique diagnostic biomarkers as well as novel targets against which to develop new therapeutics. Here we will explore the intricate network of non-coding RNAs associated with infection by the human immunodeficiency virus (HIV). Non-coding RNAs derived from both the human host as well as those from HIV itself are emerging as important regulatory elements. We discuss here the various mechanisms through which both small and long non-coding RNAs impact viral replication, pathogenesis and disease progression. Given the lack of an effective vaccine or cure for HIV and the scale of the current pandemic, a deeper understanding of the complex interplay between non-coding RNAs and HIV will support the development of innovative strategies for the treatment of HIV/acquired immunodeficiency disease (AIDS).
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Epigenetic; HIV; Transcription; lncRNA; miRNA

Mesh:

Substances:

Year:  2015        PMID: 26221763      PMCID: PMC4728059          DOI: 10.1016/j.virusres.2015.07.023

Source DB:  PubMed          Journal:  Virus Res        ISSN: 0168-1702            Impact factor:   3.303


  119 in total

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2.  Mining the human complexome database identifies RBM14 as an XPO1-associated protein involved in HIV-1 Rev function.

Authors:  Sona Budhiraja; Hongbing Liu; Jacob Couturier; Anna Malovannaya; Jun Qin; Dorothy E Lewis; Andrew P Rice
Journal:  J Virol       Date:  2015-01-14       Impact factor: 5.103

3.  "UnPAKing" human immunodeficiency virus (HIV) replication: using small interfering RNA screening to identify novel cofactors and elucidate the role of group I PAKs in HIV infection.

Authors:  Deborah G Nguyen; Karen C Wolff; Hong Yin; Jeremy S Caldwell; Kelli L Kuhen
Journal:  J Virol       Date:  2006-01       Impact factor: 5.103

Review 4.  The packaging and maturation of the HIV-1 Pol proteins.

Authors:  Melissa Hill; Gilda Tachedjian; Johnson Mak
Journal:  Curr HIV Res       Date:  2005-01       Impact factor: 1.581

5.  Evidence that HIV-1 encodes an siRNA and a suppressor of RNA silencing.

Authors:  Yamina Bennasser; Shu-Yun Le; Monsef Benkirane; Kuan-Teh Jeang
Journal:  Immunity       Date:  2005-05       Impact factor: 31.745

6.  Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.

Authors:  Stuart J D Neil; Trinity Zang; Paul D Bieniasz
Journal:  Nature       Date:  2008-01-16       Impact factor: 49.962

7.  Inhibition of human immunodeficiency virus type 1 replication by RNA interference directed against human transcription elongation factor P-TEFb (CDK9/CyclinT1).

Authors:  Ya-Lin Chiu; Hong Cao; Jean-Marc Jacque; Mario Stevenson; Tariq M Rana
Journal:  J Virol       Date:  2004-03       Impact factor: 5.103

Review 8.  Host cell factors in HIV replication: meta-analysis of genome-wide studies.

Authors:  Frederic D Bushman; Nirav Malani; Jason Fernandes; Iván D'Orso; Gerard Cagney; Tracy L Diamond; Honglin Zhou; Daria J Hazuda; Amy S Espeseth; Renate König; Sourav Bandyopadhyay; Trey Ideker; Stephen P Goff; Nevan J Krogan; Alan D Frankel; John A T Young; Sumit K Chanda
Journal:  PLoS Pathog       Date:  2009-05-29       Impact factor: 6.823

9.  NEAT1 long noncoding RNA and paraspeckle bodies modulate HIV-1 posttranscriptional expression.

Authors:  Quan Zhang; Chia-Yen Chen; Venkat S R K Yedavalli; Kuan-Teh Jeang
Journal:  MBio       Date:  2013-01-29       Impact factor: 7.867

10.  HIV-1 TAR miRNA protects against apoptosis by altering cellular gene expression.

Authors:  Zachary Klase; Rafael Winograd; Jeremiah Davis; Lawrence Carpio; Richard Hildreth; Mohammad Heydarian; Sidney Fu; Timothy McCaffrey; Eti Meiri; Mila Ayash-Rashkovsky; Shlomit Gilad; Zwi Bentwich; Fatah Kashanchi
Journal:  Retrovirology       Date:  2009-02-16       Impact factor: 4.602

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  20 in total

1.  NF-κB-Interacting Long Noncoding RNA Regulates HIV-1 Replication and Latency by Repressing NF-κB Signaling.

Authors:  Hong Wang; Yue Liu; Chen Huan; Jing Yang; Zhaolong Li; Baisong Zheng; Yingchao Wang; Wenyan Zhang
Journal:  J Virol       Date:  2020-08-17       Impact factor: 5.103

Review 2.  The long non-coding RNA H19: an active player with multiple facets to sustain the hallmarks of cancer.

Authors:  Clément Lecerf; Xuefen Le Bourhis; Eric Adriaenssens
Journal:  Cell Mol Life Sci       Date:  2019-07-23       Impact factor: 9.261

Review 3.  Long noncoding RNAs in viral infections.

Authors:  Puri Fortes; Kevin V Morris
Journal:  Virus Res       Date:  2015-10-23       Impact factor: 3.303

4.  Differentially-Expressed Pseudogenes in HIV-1 Infection.

Authors:  Aditi Gupta; C Titus Brown; Yong-Hui Zheng; Christoph Adami
Journal:  Viruses       Date:  2015-09-29       Impact factor: 5.048

Review 5.  lncRNA-mediated regulation of the interferon response.

Authors:  Saba Valadkhan; Lalith S Gunawardane
Journal:  Virus Res       Date:  2015-10-22       Impact factor: 3.303

6.  Dengue virus causes changes of MicroRNA-genes regulatory network revealing potential targets for antiviral drugs.

Authors:  Mohamed Shahen; Zihu Guo; Akhtar Hussain Shar; Reham Ebaid; Qin Tao; Wenjuan Zhang; Ziyin Wu; Yaofei Bai; Yingxue Fu; Chunli Zheng; He Wang; Piar Ali Shar; Jianling Liu; Zhenzhong Wang; Wei Xiao; Yonghua Wang
Journal:  BMC Syst Biol       Date:  2018-01-04

7.  Identification and characterization of a long non-coding RNA up-regulated during HIV-1 infection.

Authors:  Thomas S Postler; Shara N Pantry; Ronald C Desrosiers; Sankar Ghosh
Journal:  Virology       Date:  2017-08-10       Impact factor: 3.616

Review 8.  RNA binding to APOBEC deaminases; Not simply a substrate for C to U editing.

Authors:  Harold C Smith
Journal:  RNA Biol       Date:  2016-11-21       Impact factor: 4.652

Review 9.  Long Non-Coding RNAs: Emerging and Versatile Regulators in Host-Virus Interactions.

Authors:  Xing-Yu Meng; Yuzi Luo; Muhammad Naveed Anwar; Yuan Sun; Yao Gao; Huawei Zhang; Muhammad Munir; Hua-Ji Qiu
Journal:  Front Immunol       Date:  2017-11-28       Impact factor: 7.561

10.  The impact of bone marrow stromal antigen-2 (BST2) gene variants on HIV-1 control in black South African individuals.

Authors:  Bianca Da Costa Dias; Maria Paximadis; Neil Martinson; Richard E Chaisson; Osman Ebrahim; Caroline T Tiemessen
Journal:  Infect Genet Evol       Date:  2020-01-30       Impact factor: 3.342

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