Literature DB >> 16352537

"UnPAKing" human immunodeficiency virus (HIV) replication: using small interfering RNA screening to identify novel cofactors and elucidate the role of group I PAKs in HIV infection.

Deborah G Nguyen1, Karen C Wolff, Hong Yin, Jeremy S Caldwell, Kelli L Kuhen.   

Abstract

In order to identify novel proviral host factors involved in human immunodeficiency virus (HIV) infection, we performed a screen of a small interfering RNA (siRNA) library targeting 5,000 genes with the highest potential for being targets for therapeutics. Many siRNAs in the library against known host factors, such as TSG101, furin, and CXCR4, were identified as inhibitors by the screen and thus served as internal validation. In addition, many novel factors whose knockdown inhibited infection were identified, including Pak3, a member of the serine/threonine group I PAK kinases. The HIV accessory factor Nef has been shown to associate with a PAK kinase, leading to enhanced viral production; however, the exact identity of the kinase has remained controversial. Prompted by the Pak3 screen hit, we further investigated the involvement of group I PAK kinases in HIV using siRNA. Contrary to the current literature, Pak1 depletion strongly inhibited HIV infection in multiple cell systems and decreased levels of integrated provirus, while Pak2 depletion showed no effect. Overexpression of a constitutively active Pak1 mutant also enhanced HIV infection, further supporting its role as the dominant PAK involved.

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Year:  2006        PMID: 16352537      PMCID: PMC1317519          DOI: 10.1128/JVI.80.1.130-137.2006

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  42 in total

1.  A quantitative assay for HIV DNA integration in vivo.

Authors:  S L Butler; M S Hansen; F D Bushman
Journal:  Nat Med       Date:  2001-05       Impact factor: 53.440

2.  Detection of replication-competent and pseudotyped human immunodeficiency virus with a sensitive cell line on the basis of activation of an integrated beta-galactosidase gene.

Authors:  J Kimpton; M Emerman
Journal:  J Virol       Date:  1992-04       Impact factor: 5.103

3.  Overexpression of the N-terminal domain of TSG101 inhibits HIV-1 budding by blocking late domain function.

Authors:  Dimiter G Demirov; Akira Ono; Jan M Orenstein; Eric O Freed
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

4.  Human immunodeficiency virus type 1 Nef selectively associates with a catalytically active subpopulation of p21-activated kinase 2 (PAK2) independently of PAK2 binding to Nck or beta-PIX.

Authors:  G H Renkema; A Manninen; K Saksela
Journal:  J Virol       Date:  2001-03       Impact factor: 5.103

5.  Regulation of nuclear factor of activated T cells by phosphotyrosyl-specific phosphatase activity: a positive effect on HIV-1 long terminal repeat-driven transcription and a possible implication of SHP-1.

Authors:  J F Fortin; B Barbeau; G A Robichaud; M E Paré ; A M Lemieux; M J Tremblay
Journal:  Blood       Date:  2001-04-15       Impact factor: 22.113

6.  p21-activated kinase 1 plays a critical role in cellular activation by Nef.

Authors:  O T Fackler; X Lu; J A Frost; M Geyer; B Jiang; W Luo; A Abo; A S Alberts; B M Peterlin
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

7.  Lentivirus Nef specifically activates Pak2.

Authors:  V K Arora; R P Molina; J L Foster; J L Blakemore; J Chernoff; B L Fredericksen; J V Garcia
Journal:  J Virol       Date:  2000-12       Impact factor: 5.103

8.  Missense mutation in PAK3, R67C, causes X-linked nonspecific mental retardation.

Authors:  T Bienvenu; V des Portes; N McDonell; A Carrié; R Zemni; P Couvert; H H Ropers; C Moraine; H van Bokhoven; J P Fryns; K Allen; C A Walsh; J Boué; A Kahn; J Chelly; C Beldjord
Journal:  Am J Med Genet       Date:  2000-08-14

9.  Human immunodeficiency virus type 1 Nef associates with a cellular serine kinase in T lymphocytes.

Authors:  E T Sawai; A Baur; H Struble; B M Peterlin; J A Levy; C Cheng-Mayer
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-15       Impact factor: 11.205

10.  Alternative mechanisms for activation of human immunodeficiency virus enhancer in T cells.

Authors:  G J Nabel; S A Rice; D M Knipe; D Baltimore
Journal:  Science       Date:  1988-03-11       Impact factor: 47.728

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  29 in total

1.  Identification of cellular proteins required for replication of human immunodeficiency virus type 1.

Authors:  Natallia Dziuba; Monique R Ferguson; William A O'Brien; Anthony Sanchez; Andrew J Prussia; Natalie J McDonald; Brian M Friedrich; Guangyu Li; Michael W Shaw; Jinsong Sheng; Thomas W Hodge; Donald H Rubin; James L Murray
Journal:  AIDS Res Hum Retroviruses       Date:  2012-04-20       Impact factor: 2.205

2.  Alphaherpesvirus US3-mediated reorganization of the actin cytoskeleton is mediated by group A p21-activated kinases.

Authors:  Céline Van den Broeke; Maria Radu; Matthias Deruelle; Hans Nauwynck; Clemens Hofmann; Zahara M Jaffer; Jonathan Chernoff; Herman W Favoreel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-12       Impact factor: 11.205

Review 3.  Virus entry by macropinocytosis.

Authors:  Jason Mercer; Ari Helenius
Journal:  Nat Cell Biol       Date:  2009-05       Impact factor: 28.824

4.  Identification of the atypical MAPK Erk3 as a novel substrate for p21-activated kinase (Pak) activity.

Authors:  Alina De la Mota-Peynado; Jonathan Chernoff; Alexander Beeser
Journal:  J Biol Chem       Date:  2011-02-11       Impact factor: 5.157

5.  Neuroinflammation-Induced Interactions between Protease-Activated Receptor 1 and Proprotein Convertases in HIV-Associated Neurocognitive Disorder.

Authors:  WooJin Kim; Erin Zekas; Robert Lodge; Delia Susan-Resiga; Edwidge Marcinkiewicz; Rachid Essalmani; Koichiro Mihara; Rithwik Ramachandran; Eugene Asahchop; Benjamin Gelman; Éric A Cohen; Christopher Power; Morley D Hollenberg; Nabil G Seidah
Journal:  Mol Cell Biol       Date:  2015-08-17       Impact factor: 4.272

6.  XBP-1, a novel human T-lymphotropic virus type 1 (HTLV-1) tax binding protein, activates HTLV-1 basal and tax-activated transcription.

Authors:  Sebastian C Y Ku; Jialing Lee; Joanne Lau; Meera Gurumurthy; Raymond Ng; Siew Hui Lwa; Joseph Lee; Zachary Klase; Fatah Kashanchi; Sheng-Hao Chao
Journal:  J Virol       Date:  2008-02-20       Impact factor: 5.103

Review 7.  The emerging role of long non-coding RNAs in HIV infection.

Authors:  Daniel C Lazar; Kevin V Morris; Sheena M Saayman
Journal:  Virus Res       Date:  2015-07-26       Impact factor: 3.303

8.  Human immunodeficiency virus type 1 Nef recruits the guanine exchange factor Vav1 via an unexpected interface into plasma membrane microdomains for association with p21-activated kinase 2 activity.

Authors:  Susanne Rauch; Kati Pulkkinen; Kalle Saksela; Oliver T Fackler
Journal:  J Virol       Date:  2007-12-19       Impact factor: 5.103

9.  Human immunodeficiency virus type 1 (HIV-1) induces the cytoplasmic retention of heterogeneous nuclear ribonucleoprotein A1 by disrupting nuclear import: implications for HIV-1 gene expression.

Authors:  Anne Monette; Lara Ajamian; Marcelo López-Lastra; Andrew J Mouland
Journal:  J Biol Chem       Date:  2009-09-08       Impact factor: 5.157

10.  CDK9 inhibitor FIT-039 prevents replication of multiple DNA viruses.

Authors:  Makoto Yamamoto; Hiroshi Onogi; Isao Kii; Suguru Yoshida; Kei Iida; Hiroyuki Sakai; Minako Abe; Toshiaki Tsubota; Nobutoshi Ito; Takamitsu Hosoya; Masatoshi Hagiwara
Journal:  J Clin Invest       Date:  2014-07-08       Impact factor: 14.808

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