Literature DB >> 26221678

Finite-Dimensional Lie Algebras for Fast Diffeomorphic Image Registration.

Miaomiao Zhang, P Thomas Fletcher.   

Abstract

This paper presents a fast geodesic shooting algorithm for diffeomorphic image registration. We first introduce a novel finite-dimensional Lie algebra structure on the space of bandlimited velocity fields. We then show that this space can effectively represent initial velocities for diffeomorphic image registration at much lower dimensions than typically used, with little to no loss in registration accuracy. We then leverage the fact that the geodesic evolution equations, as well as the adjoint Jacobi field equations needed for gradient descent methods, can be computed entirely in this finite-dimensional Lie algebra. The result is a geodesic shooting method for large deformation metric mapping (LDDMM) that is dramatically faster and less memory intensive than state-of-the-art methods. We demonstrate the effectiveness of our model to register 3D brain images and compare its registration accuracy, run-time, and memory consumption with leading LDDMM methods. We also show how our algorithm breaks through the prohibitive time and memory requirements of diffeomorphic atlas building.

Mesh:

Year:  2015        PMID: 26221678     DOI: 10.1007/978-3-319-19992-4_19

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  11 in total

1.  Quicksilver: Fast predictive image registration - A deep learning approach.

Authors:  Xiao Yang; Roland Kwitt; Martin Styner; Marc Niethammer
Journal:  Neuroimage       Date:  2017-07-11       Impact factor: 6.556

2.  Registration uncertainty quantification via low-dimensional characterization of geometric deformations.

Authors:  Jian Wang; William M Wells; Polina Golland; Miaomiao Zhang
Journal:  Magn Reson Imaging       Date:  2019-06-07       Impact factor: 2.546

3.  Probabilistic modeling of anatomical variability using a low dimensional parameterization of diffeomorphisms.

Authors:  Miaomiao Zhang; William M Wells; Polina Golland
Journal:  Med Image Anal       Date:  2017-07-08       Impact factor: 8.545

4.  Symplectomorphic registration with phase space regularization by entropy spectrum pathways.

Authors:  Vitaly L Galinsky; Lawrence R Frank
Journal:  Magn Reson Med       Date:  2018-09-19       Impact factor: 4.668

5.  Efficient Parallel Transport in the Group of Diffeomorphisms via Reduction to the Lie Algebra.

Authors:  Kristen M Campbell; P Thomas Fletcher
Journal:  Graphs Biomed Image Anal Comput Anat Imaging Genet (2017)       Date:  2017-09-08

6.  Transformations Based on Continuous Piecewise-Affine Velocity Fields.

Authors:  Oren Freifeld; Soren Hauberg; Kayhan Batmanghelich; Jonn W Fisher
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2017-01-11       Impact factor: 6.226

7.  Fast predictive simple geodesic regression.

Authors:  Zhipeng Ding; Greg Fleishman; Xiao Yang; Paul Thompson; Roland Kwitt; Marc Niethammer
Journal:  Med Image Anal       Date:  2019-06-12       Impact factor: 8.545

8.  Sheet Probability Index (SPI): Characterizing the geometrical organization of the white matter with diffusion MRI.

Authors:  Chantal M W Tax; Tom Dela Haije; Andrea Fuster; Carl-Fredrik Westin; Max A Viergever; Luc Florack; Alexander Leemans
Journal:  Neuroimage       Date:  2016-07-25       Impact factor: 6.556

Review 9.  Computational anatomy and diffeomorphometry: A dynamical systems model of neuroanatomy in the soft condensed matter continuum.

Authors:  Michael I Miller; Sylvain Arguillère; Daniel J Tward; Laurent Younes
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2018-06-04

10.  Fast GPU 3D diffeomorphic image registration.

Authors:  Malte Brunn; Naveen Himthani; George Biros; Miriam Mehl; Andreas Mang
Journal:  J Parallel Distrib Comput       Date:  2020-12-10       Impact factor: 3.734

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