Literature DB >> 26216972

Reconstitution of TCA cycle with DAOCS to engineer Escherichia coli into an efficient whole cell catalyst of penicillin G.

Baixue Lin1, Keqiang Fan2, Jian Zhao1, Junjie Ji2, Linjun Wu2, Keqian Yang3, Yong Tao4.   

Abstract

Many medically useful semisynthetic cephalosporins are derived from 7-aminodeacetoxycephalosporanic acid (7-ADCA), which has been traditionally made by the polluting chemical method. Here, a whole-cell biocatalytic process based on an engineered Escherichia coli strain expressing 2-oxoglutarate-dependent deacetoxycephalosporin C synthase (DAOCS) for converting penicillin G to G-7-ADCA is developed. The major engineering strategy is to reconstitute the tricarboxylic acid (TCA) cycle of E. coli to force the metabolic flux to go through DAOCS catalyzed reaction for 2-oxoglutarate to succinate conversion. Then the glyoxylate bypass was disrupted to eliminate metabolic flux that may circumvent the reconstituted TCA cycle. Additional engineering steps were taken to reduce the degradation of penicillin G and G-7-ADCA in the bioconversion process. These steps include engineering strategies to reduce acetate accumulation in the biocatalytic process and to knock out a host β-lactamase involved in the degradation of penicillin G and G-7-ADCA. By combining these manipulations in an engineered strain, the yield of G-7-ADCA was increased from 2.50 ± 0.79 mM (0.89 ± 0.28 g/L, 0.07 ± 0.02 g/gDCW) to 29.01 ± 1.27 mM (10.31 ± 0.46 g/L, 0.77 ± 0.03 g/gDCW) with a conversion rate of 29.01 mol%, representing an 11-fold increase compared with the starting strain (2.50 mol%).

Entities:  

Keywords:  DAOCS; G-7-ADCA; TCA cycle; reconstitution; whole-cell catalyst

Mesh:

Substances:

Year:  2015        PMID: 26216972      PMCID: PMC4538657          DOI: 10.1073/pnas.1502866112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Metabolic engineering for acetate control in large scale fermentation.

Authors:  Yong Tao; Qiong Cheng; Alexander D Kopatsis
Journal:  Methods Mol Biol       Date:  2012

2.  Elucidation of conditions allowing conversion of penicillin G and other penicillins to deacetoxycephalosporins by resting cells and extracts of Streptomyces clavuligerus NP1.

Authors:  H Cho; J L Adrio; J M Luengo; S Wolfe; S Ocran; G Hintermann; J M Piret; A L Demain
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

3.  Characterization of the acetate-producing pathways in Escherichia coli.

Authors:  Cheryl R Dittrich; George N Bennett; Ka-Yiu San
Journal:  Biotechnol Prog       Date:  2005 Jul-Aug

4.  Structure of a cephalosporin synthase.

Authors:  K Valegård; A C van Scheltinga; M D Lloyd; T Hara; S Ramaswamy; A Perrakis; A Thompson; H J Lee; J E Baldwin; C J Schofield; J Hajdu; I Andersson
Journal:  Nature       Date:  1998-08-20       Impact factor: 49.962

Review 5.  Directed evolution and rational approaches to improving Streptomyces clavuligerus deacetoxycephalosporin C synthase for cephalosporin production.

Authors:  Kian-Sim Goo; Chun-Song Chua; Tiow-Suan Sim
Journal:  J Ind Microbiol Biotechnol       Date:  2009-03-07       Impact factor: 3.346

Review 6.  The penicillin-binding proteins: structure and role in peptidoglycan biosynthesis.

Authors:  Eric Sauvage; Frédéric Kerff; Mohammed Terrak; Juan A Ayala; Paulette Charlier
Journal:  FEMS Microbiol Rev       Date:  2008-02-11       Impact factor: 16.408

7.  E. coli genome manipulation by P1 transduction.

Authors:  Lynn C Thomason; Nina Costantino; Donald L Court
Journal:  Curr Protoc Mol Biol       Date:  2007-07

8.  Acetate accumulation through alternative metabolic pathways in ackA (-) pta (-) poxB (-) triple mutant in E. coli B (BL21).

Authors:  Je-Nie Phue; Sang Jun Lee; Jeanne B Kaufman; Alejandro Negrete; Joseph Shiloach
Journal:  Biotechnol Lett       Date:  2010-08-12       Impact factor: 2.716

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10.  Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.

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Journal:  Mol Syst Biol       Date:  2006-02-21       Impact factor: 11.429

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1.  Developing a pyruvate-driven metabolic scenario for growth-coupled microbial production.

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2.  Designing of an Efficient Whole-Cell Biocatalyst System for Converting L-Lysine Into Cis-3-Hydroxypipecolic Acid.

Authors:  Shewei Hu; Yangyang Li; Alei Zhang; Hui Li; Kequan Chen; Pingkai Ouyang
Journal:  Front Microbiol       Date:  2022-06-27       Impact factor: 6.064

Review 3.  Engineering deacetoxycephalosporin C synthase as a catalyst for the bioconversion of penicillins.

Authors:  Keqiang Fan; Baixue Lin; Yong Tao; Keqian Yang
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-08       Impact factor: 3.346

4.  Reconstitution of TCA cycle involving l-isoleucine dioxygenase for hydroxylation of l-isoleucine in Escherichia coli using CRISPR-Cas9.

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Review 5.  Whole-cell biocatalysts by design.

Authors:  Baixue Lin; Yong Tao
Journal:  Microb Cell Fact       Date:  2017-06-13       Impact factor: 5.328

6.  Transcriptomic and Ectoine Analysis of Halotolerant Nocardiopsis gilva YIM 90087T Under Salt Stress.

Authors:  Jian Han; Quan-Xiu Gao; Yong-Guang Zhang; Li Li; Osama A A Mohamad; Manik Prabhu Narsing Rao; Min Xiao; Wael N Hozzein; Dalal H M Alkhalifah; Yong Tao; Wen-Jun Li
Journal:  Front Microbiol       Date:  2018-03-29       Impact factor: 5.640

Review 7.  Roles of 2-oxoglutarate oxygenases and isopenicillin N synthase in β-lactam biosynthesis.

Authors:  Patrick Rabe; Jos J A G Kamps; Christopher J Schofield; Christopher T Lohans
Journal:  Nat Prod Rep       Date:  2018-08-15       Impact factor: 13.423

8.  Process optimization for enhancing production of cis-4-hydroxy-L-proline by engineered Escherichia coli.

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Journal:  Microb Cell Fact       Date:  2017-11-22       Impact factor: 5.328

9.  Engineering Improves Enzymatic Synthesis of L-Tryptophan by Tryptophan Synthase from Escherichia coli.

Authors:  Lisheng Xu; Fangkai Han; Zeng Dong; Zhaojun Wei
Journal:  Microorganisms       Date:  2020-04-05

10.  Enhancing Production of Pinene in Escherichia coli by Using a Combination of Tolerance, Evolution, and Modular Co-culture Engineering.

Authors:  Fu-Xing Niu; Xin He; Ya-Qin Wu; Jian-Zhong Liu
Journal:  Front Microbiol       Date:  2018-07-31       Impact factor: 5.640

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