Literature DB >> 26204249

Mass spectrometry for the assessment of the occurrence and biological consequences of DNA adducts.

Shuo Liu1, Yinsheng Wang2.   

Abstract

Exogenous and endogenous sources of chemical species can react, directly or after metabolic activation, with DNA to yield DNA adducts. If not repaired, DNA adducts may compromise cellular functions by blocking DNA replication and/or inducing mutations. Unambiguous identification of the structures and accurate measurements of the levels of DNA adducts in cellular and tissue DNA constitute the first and important step towards understanding the biological consequences of these adducts. The advances in mass spectrometry (MS) instrumentation in the past 2-3 decades have rendered MS an important tool for structure elucidation, quantification, and revelation of the biological consequences of DNA adducts. In this review, we summarized the development of MS techniques on these fronts for DNA adduct analysis. We placed our emphasis of discussion on sample preparation, the combination of MS with gas chromatography- or liquid chromatography (LC)-based separation techniques for the quantitative measurement of DNA adducts, and the use of LC-MS along with molecular biology tools for understanding the human health consequences of DNA adducts. The applications of mass spectrometry-based DNA adduct analysis for predicting the therapeutic outcome of anti-cancer agents, for monitoring the human exposure to endogenous and environmental genotoxic agents, and for DNA repair studies were also discussed.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26204249      PMCID: PMC4787602          DOI: 10.1039/c5cs00316d

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  225 in total

1.  DNA adducts of 2,3-epoxy-4-hydroxynonanal: detection of 7-(1', 2'-dihydroxyheptyl)-3H-imidazo[2,1-i]purine and 1,N6-ethenoadenine by gas chromatography/negative ion chemical ionization/mass spectrometry.

Authors:  H J Chen; L Zhang; J Cox; J A Cunningham; F L Chung
Journal:  Chem Res Toxicol       Date:  1998-12       Impact factor: 3.739

Review 2.  Protein oxidation in aging, disease, and oxidative stress.

Authors:  B S Berlett; E R Stadtman
Journal:  J Biol Chem       Date:  1997-08-15       Impact factor: 5.157

3.  Metabolites and DNA adduct formation from flavoenzyme-activated porfiromycin.

Authors:  S S Pan; T Iracki
Journal:  Mol Pharmacol       Date:  1988-08       Impact factor: 4.436

4.  LC/MS/MS method for the quantitation of trans-2-hexenal-derived exocyclic 1,N(2)-propanodeoxyguanosine in DNA.

Authors:  Matthew D Stout; Yo-Chan Jeong; Gunnar Boysen; Yutai Li; Ramiah Sangaiah; Louise M Ball; Avram Gold; James A Swenberg
Journal:  Chem Res Toxicol       Date:  2006-04       Impact factor: 3.739

5.  Separation and sequencing of isomeric oligonucleotide adducts using monolithic columns by ion-pair reversed-phase nano-HPLC coupled to ion trap mass spectrometry.

Authors:  Wennan Xiong; James Glick; Yiqing Lin; Paul Vouros
Journal:  Anal Chem       Date:  2007-06-19       Impact factor: 6.986

6.  The 32P-postlabeling assay for DNA adducts.

Authors:  David H Phillips; Volker M Arlt
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 7.  Genotoxic lipid peroxidation products: their DNA damaging properties and role in formation of endogenous DNA adducts.

Authors:  P C Burcham
Journal:  Mutagenesis       Date:  1998-05       Impact factor: 3.000

8.  Structure elucidation of DNA interstrand cross-link by a combination of nuclease P1 digestion with mass spectrometry.

Authors:  Yuesong Wang; Yinsheng Wang
Journal:  Anal Chem       Date:  2003-11-15       Impact factor: 6.986

9.  Noninvasive measurement of smoking-associated N(3)-ethyladenine and N(7)-ethylguanine in human salivary DNA by stable isotope dilution nanoflow liquid chromatography-nanospray ionization tandem mass spectrometry.

Authors:  Hauh-Jyun Candy Chen; Chao-Ray Lin
Journal:  Toxicol Lett       Date:  2013-12-01       Impact factor: 4.372

Review 10.  Are we sure we know how to measure 8-oxo-7,8-dihydroguanine in DNA from human cells?

Authors:  Andrew R Collins; Jean Cadet; Lennart Möller; Henrik E Poulsen; Jose Viña
Journal:  Arch Biochem Biophys       Date:  2004-03-01       Impact factor: 4.013

View more
  42 in total

1.  Traceless Tandem Lesion Formation in DNA from a Nitrogen-Centered Purine Radical.

Authors:  Liwei Zheng; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2018-05-08       Impact factor: 15.419

Review 2.  Chemical Analysis of DNA Damage.

Authors:  Yang Yu; Pengcheng Wang; Yuxiang Cui; Yinsheng Wang
Journal:  Anal Chem       Date:  2017-11-07       Impact factor: 6.986

Review 3.  DNA adducts: Formation, biological effects, and new biospecimens for mass spectrometric measurements in humans.

Authors:  Byeong Hwa Yun; Jingshu Guo; Medjda Bellamri; Robert J Turesky
Journal:  Mass Spectrom Rev       Date:  2018-06-11       Impact factor: 10.946

4.  A highly sensitive and selective signal-on strategy for microRNA quantification.

Authors:  Li Pan; Huaisheng Zhang; Jingjin Zhao; Xiangtang Li; Rui Xu; Yinyuan Mo; Paul B Tchounwou; Yi-Ming Liu
Journal:  Anal Chim Acta       Date:  2019-12-03       Impact factor: 6.558

5.  Quantification of DNA Lesions Induced by 4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanol in Mammalian Cells.

Authors:  Su Guo; Jiapeng Leng; Ying Tan; Nathan E Price; Yinsheng Wang
Journal:  Chem Res Toxicol       Date:  2019-02-15       Impact factor: 3.739

6.  Mechanism of DNA alkylation-induced transcriptional stalling, lesion bypass, and mutagenesis.

Authors:  Liang Xu; Wei Wang; Jiabin Wu; Ji Hyun Shin; Pengcheng Wang; Ilona Christy Unarta; Jenny Chong; Yinsheng Wang; Dong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-07       Impact factor: 11.205

Review 7.  Formation and repair of oxidatively generated damage in cellular DNA.

Authors:  Jean Cadet; Kelvin J A Davies; Marisa Hg Medeiros; Paolo Di Mascio; J Richard Wagner
Journal:  Free Radic Biol Med       Date:  2017-01-02       Impact factor: 7.376

8.  Methods and Challenges for Computational Data Analysis for DNA Adductomics.

Authors:  Scott J Walmsley; Jingshu Guo; Jinhua Wang; Peter W Villalta; Robert J Turesky
Journal:  Chem Res Toxicol       Date:  2019-11-06       Impact factor: 3.739

9.  The roles of polymerases ν and θ in replicative bypass of O 6- and N 2-alkyl-2'-deoxyguanosine lesions in human cells.

Authors:  Hua Du; Pengcheng Wang; Jun Wu; Xiaomei He; Yinsheng Wang
Journal:  J Biol Chem       Date:  2020-02-25       Impact factor: 5.157

10.  Quantification of Azaserine-Induced Carboxymethylated and Methylated DNA Lesions in Cells by Nanoflow Liquid Chromatography-Nanoelectrospray Ionization Tandem Mass Spectrometry Coupled with the Stable Isotope-Dilution Method.

Authors:  Yang Yu; Jianshuang Wang; Pengcheng Wang; Yinsheng Wang
Journal:  Anal Chem       Date:  2016-08-02       Impact factor: 6.986

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.