| Literature DB >> 26198819 |
Sanish Sathyan1, Linda V Koshy2, Lekshmy Srinivas3, Lekshmi Srinivas, H V Easwer4, S Premkumar5, Suresh Nair6, R N Bhattacharya7, Jacob P Alapatt8, Moinak Banerjee9.
Abstract
BACKGROUND: Intracranial aneurysm (IA) is often asymptomatic until the time of rupture resulting in subarachnoid hemorrhage (SAH).There is no precise biochemical or phenotype marker for diagnosis of aneurysm. Environmental risk factors that associate with IA can result in modifying the effect of inherited genetic factors and thereby increase the susceptibility to SAH. In addition subsequent to aneurismal rupture, the nature and quantum of inflammatory response might be critical for repair. Therefore, genetic liability to inflammatory response caused by polymorphisms in cytokine genes might be the common denominator for gene and environment in the development of aneurysm and complications associated with rupture.Entities:
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Year: 2015 PMID: 26198819 PMCID: PMC4510902 DOI: 10.1186/s12974-015-0354-0
Source DB: PubMed Journal: J Neuroinflammation ISSN: 1742-2094 Impact factor: 8.322
Clinical characteristics of patients
| Patient characteristics | |
| Mean age ± SD, years | 51.17 ± 11.37 |
| Men, % | 55.7 |
| Women, % | 44.2 |
| History of hypertension,% | 35 |
| History of diabetes, % | 5.4 |
| Family history of aSAH, % | 3.7 |
| Cigarette smoking, % | 42.92 |
| Alcohol use, % | 21.8 |
| Intracranial aneurysm location | Percentage |
| Anterior communicating artery | 39.21 |
| Anterior cerebral artery | 8.37 |
| Middle cerebral arteries | 22.91 |
| Internal carotid artery | 17.18 |
| Posterior communicating artery | 8.81 |
| Basilar artery | 2.64 |
| Posterior cerebral artery | 0.44 |
| Vertebral arteries | 0.44 |
Comparison of the genotype and allele frequencies of associated cytokine gene variants between patients and controls
|
| OR(95 %CI) |
| FS score | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| IFNG | AA | AG | GG | A | G | |||||
| rs2069718 | Cases | 79 | 103 | 39 | 0.020 | 261 | 181 | 1.20 (0.926 to 1.560) | 0.184 | ND |
| 0.36 | 0.47 | 0.18 | 0.59 | 0.41 | ||||||
| Controls | 61 | 143 | 39 | 265 | 221 | |||||
| 0.25 | 0.59 | 0.16 | 0.55 | 0.45 | ||||||
| TNF | GG | AG | AA | G | A | |||||
| rs361525 | Cases | 171 | 42 | 2 | 384 | 46 | 1.89 (1.163 to 3.064) | 0.010 | 0.208 | |
| 0.80 | 0.20 | 0.01 | 0.019 | 0.89 | 0.11 | |||||
| Controls | 216 | 25 | 2 | 457 | 29 | |||||
| 0.89 | 0.10 | 0.01 | 0.94 | 0.06 | ||||||
| IL6 | GG | GC | CC | G | C | |||||
| rs1800796 | Cases | 57 | 126 | 37 | 0.050 | 240 | 200 | 0.94 (0.729 to 1.225) | 0.691 | 0.208 |
| 0.26 | 0.57 | 0.17 | 0.55 | 0.45 | ||||||
| Controls | 81 | 111 | 52 | 273 | 215 | |||||
| 0.33 | 0.45 | 0.21 | 0.56 | 0.44 | ||||||
| IL10 | CC | CT | TT | C | T | |||||
| rs1800871 | Cases | 48 | 142 | 40 | 0.016 | 238 | 222 | 1.08 (0.837 to 1.396) | 0.558 | 0.101 |
| 0.21 | 0.62 | 0.17 | 0.52 | 0.48 | ||||||
| Controls | 61 | 118 | 62 | 240 | 242 | |||||
| 0.25 | 0.49 | 0.26 | 0.50 | 0.50 | ||||||
| IL10 | AA | AC | CC | A | C | |||||
| rs1800872 | Cases | 39 | 143 | 48 | 0.005 | 221 | 239 | 0.955 (0.740 to 1.233) | 0.745 | 0.101 |
| 0.17 | 0.62 | 0.21 | 0.48 | 0.52 | ||||||
| Controls | 62 | 116 | 66 | 240 | 248 | |||||
| 0.25 | 0.48 | 0.27 | 0.49 | 0.51 | ||||||
FS score functional significance score, ND not determined
Fig. 1Genetic association analysis with studied variants between IA patients and controls. SNPs were plotted against –log(p value)
Fig. 2Genetic association analysis with studied variants between hypertensive and non-hypertensive IA. SNPs were plotted against –log(p value)
Fig. 3Meta-analysis of IL6 rs1800796 (−572C/G) C versus G allele in patients with intracranial aneurysm versus normal control. Random and fixed effect models
Fig. 4Meta-analysis of IL6 rs1800796 (−572C/G) C versus G allele in patients with intracranial aneurysm versus normal control in C allele-associated population. Random and fixed effect models
Fig. 5Meta-analysis of IL6 rs1800796 (−572C/G) G versus C allele in patients with intracranial aneurysm versus normal control in C allele-associated population. Random and fixed effect models
Fig. 6Meta-analysis of IL12B gene variant rs3212227 with intracranial aneurysm. Random and fixed effect models
Fig. 7Meta-analysis of IL1B gene variant rs16944 with intracranial aneurysm. Random and fixed effect models