Literature DB >> 26195294

Assessing effects of prenatal alcohol exposure using group-wise sparse representation of fMRI data.

Jinglei Lv1, Xi Jiang2, Xiang Li2, Dajiang Zhu2, Shijie Zhao1, Tuo Zhang1, Xintao Hu3, Junwei Han3, Lei Guo3, Zhihao Li4, Claire Coles5, Xiaoping Hu4, Tianming Liu2.   

Abstract

Task-based fMRI activation mapping has been widely used in clinical neuroscience in order to assess different functional activity patterns in conditions such as prenatal alcohol exposure (PAE) affected brains and healthy controls. In this paper, we propose a novel, alternative approach of group-wise sparse representation of the fMRI data of multiple groups of subjects (healthy control, exposed non-dysmorphic PAE and exposed dysmorphic PAE) and assess the systematic functional activity differences among these three populations. Specifically, a common time series signal dictionary is learned from the aggregated fMRI signals of all three groups of subjects, and then the weight coefficient matrices (named statistical coefficient map (SCM)) associated with each common dictionary were statistically assessed for each group separately. Through inter-group comparisons based on the correspondence established by the common dictionary, our experimental results have demonstrated that the group-wise sparse coding strategy and the SCM can effectively reveal a collection of brain networks/regions that were affected by different levels of severity of PAE.
Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Group-wise; Prenatal alcohol exposure; Sparse coding; Task fMRI

Mesh:

Year:  2015        PMID: 26195294      PMCID: PMC4536108          DOI: 10.1016/j.pscychresns.2015.07.012

Source DB:  PubMed          Journal:  Psychiatry Res        ISSN: 0165-1781            Impact factor:   3.222


  44 in total

Review 1.  What does fMRI tell us about neuronal activity?

Authors:  David J Heeger; David Ress
Journal:  Nat Rev Neurosci       Date:  2002-02       Impact factor: 34.870

2.  Default mode network dysfunction in adults with prenatal alcohol exposure.

Authors:  Priya Santhanam; Claire D Coles; Zhihao Li; Longchuan Li; Mary Ellen Lynch; Xiaoping Hu
Journal:  Psychiatry Res       Date:  2011-11-10       Impact factor: 3.222

3.  An overview and some new developments in the statistical analysis of PET and fMRI data.

Authors:  K J Worsley
Journal:  Hum Brain Mapp       Date:  1997       Impact factor: 5.038

4.  A data-driven sparse GLM for fMRI analysis using sparse dictionary learning with MDL criterion.

Authors:  Kangjoo Lee; Sungho Tak; Jong Chul Ye
Journal:  IEEE Trans Med Imaging       Date:  2010-12-06       Impact factor: 10.048

Review 5.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

6.  A Bayesian hierarchical framework for spatial modeling of fMRI data.

Authors:  F DuBois Bowman; Brian Caffo; Susan Spear Bassett; Clinton Kilts
Journal:  Neuroimage       Date:  2007-08-24       Impact factor: 6.556

7.  fMRI data analysis with nonstationary noise models: a Bayesian approach.

Authors:  Huaien Luo; Sadasivan Puthusserypady
Journal:  IEEE Trans Biomed Eng       Date:  2007-09       Impact factor: 4.538

8.  Sparse representation of whole-brain fMRI signals for identification of functional networks.

Authors:  Jinglei Lv; Xi Jiang; Xiang Li; Dajiang Zhu; Hanbo Chen; Tuo Zhang; Shu Zhang; Xintao Hu; Junwei Han; Heng Huang; Jing Zhang; Lei Guo; Tianming Liu
Journal:  Med Image Anal       Date:  2014-11-08       Impact factor: 8.545

9.  Group-wise FMRI activation detection on DICCCOL landmarks.

Authors:  Jinglei Lv; Lei Guo; Dajiang Zhu; Tuo Zhang; Xintao Hu; Junwei Han; Tianming Liu
Journal:  Neuroinformatics       Date:  2014-10

10.  SimTB, a simulation toolbox for fMRI data under a model of spatiotemporal separability.

Authors:  Erik B Erhardt; Elena A Allen; Yonghua Wei; Tom Eichele; Vince D Calhoun
Journal:  Neuroimage       Date:  2011-12-08       Impact factor: 6.556

View more
  11 in total

1.  Modeling task-based fMRI data via deep belief network with neural architecture search.

Authors:  Ning Qiang; Qinglin Dong; Wei Zhang; Bao Ge; Fangfei Ge; Hongtao Liang; Yifei Sun; Jie Gao; Tianming Liu
Journal:  Comput Med Imaging Graph       Date:  2020-06-06       Impact factor: 4.790

2.  Joint representation of consistent structural and functional profiles for identification of common cortical landmarks.

Authors:  Shu Zhang; Yu Zhao; Xi Jiang; Dinggang Shen; Tianming Liu
Journal:  Brain Imaging Behav       Date:  2018-06       Impact factor: 3.978

3.  Constructing fine-granularity functional brain network atlases via deep convolutional autoencoder.

Authors:  Yu Zhao; Qinglin Dong; Hanbo Chen; Armin Iraji; Yujie Li; Milad Makkie; Zhifeng Kou; Tianming Liu
Journal:  Med Image Anal       Date:  2017-08-18       Impact factor: 8.545

4.  Assessing the effects of cocaine dependence and pathological gambling using group-wise sparse representation of natural stimulus FMRI data.

Authors:  Yudan Ren; Jun Fang; Jinglei Lv; Xintao Hu; Cong Christine Guo; Lei Guo; Jiansong Xu; Marc N Potenza; Tianming Liu
Journal:  Brain Imaging Behav       Date:  2017-08       Impact factor: 3.978

5.  Task fMRI data analysis based on supervised stochastic coordinate coding.

Authors:  Jinglei Lv; Binbin Lin; Qingyang Li; Wei Zhang; Yu Zhao; Xi Jiang; Lei Guo; Junwei Han; Xintao Hu; Christine Guo; Jieping Ye; Tianming Liu
Journal:  Med Image Anal       Date:  2017-02-20       Impact factor: 8.545

6.  Automatic recognition of holistic functional brain networks using iteratively optimized convolutional neural networks (IO-CNN) with weak label initialization.

Authors:  Yu Zhao; Fangfei Ge; Tianming Liu
Journal:  Med Image Anal       Date:  2018-07       Impact factor: 8.545

7.  Automatic Recognition of fMRI-Derived Functional Networks Using 3-D Convolutional Neural Networks.

Authors:  Yu Zhao; Qinglin Dong; Shu Zhang; Wei Zhang; Hanbo Chen; Xi Jiang; Lei Guo; Xintao Hu; Junwei Han; Tianming Liu
Journal:  IEEE Trans Biomed Eng       Date:  2017-06-15       Impact factor: 4.538

8.  Temporal Dynamics Assessment of Spatial Overlap Pattern of Functional Brain Networks Reveals Novel Functional Architecture of Cerebral Cortex.

Authors:  Xi Jiang; Xiang Li; Jinglei Lv; Shijie Zhao; Shu Zhang; Wei Zhang; Tuo Zhang; Junwei Han; Lei Guo; Tianming Liu
Journal:  IEEE Trans Biomed Eng       Date:  2016-08-10       Impact factor: 4.538

9.  Connectome-scale group-wise consistent resting-state network analysis in autism spectrum disorder.

Authors:  Yu Zhao; Hanbo Chen; Yujie Li; Jinglei Lv; Xi Jiang; Fangfei Ge; Tuo Zhang; Shu Zhang; Bao Ge; Cheng Lyu; Shijie Zhao; Junwei Han; Lei Guo; Tianming Liu
Journal:  Neuroimage Clin       Date:  2016-06-07       Impact factor: 4.881

10.  Sparse coding reveals greater functional connectivity in female brains during naturalistic emotional experience.

Authors:  Yudan Ren; Jinglei Lv; Lei Guo; Jun Fang; Christine Cong Guo
Journal:  PLoS One       Date:  2017-12-22       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.