Literature DB >> 26195108

Growth Rates of Microbes in the Oceans.

David L Kirchman1.   

Abstract

A microbe's growth rate helps to set its ecological success and its contribution to food web dynamics and biogeochemical processes. Growth rates at the community level are constrained by biomass and trophic interactions among bacteria, phytoplankton, and their grazers. Phytoplankton growth rates are approximately 1 d(-1), whereas most heterotrophic bacteria grow slowly, close to 0.1 d(-1); only a few taxa can grow ten times as fast. Data from 16S rRNA and other approaches are used to speculate about the growth rate and the life history strategy of SAR11, the most abundant clade of heterotrophic bacteria in the oceans. These strategies are also explored using genomic data. Although the methods and data are imperfect, the available data can be used to set limits on growth rates and thus on the timescale for changes in the composition and structure of microbial communities.

Keywords:  SAR11; defense specialist; genome streamlining; kill-the-winner; oligotroph; rRNA

Mesh:

Year:  2015        PMID: 26195108     DOI: 10.1146/annurev-marine-122414-033938

Source DB:  PubMed          Journal:  Ann Rev Mar Sci        ISSN: 1941-0611


  38 in total

1.  Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary.

Authors:  Thomas S Lankiewicz; Matthew T Cottrell; David L Kirchman
Journal:  ISME J       Date:  2015-09-22       Impact factor: 10.302

2.  Ecological Genomics of the Uncultivated Marine Roseobacter Lineage CHAB-I-5.

Authors:  Yao Zhang; Ying Sun; Nianzhi Jiao; Ramunas Stepanauskas; Haiwei Luo
Journal:  Appl Environ Microbiol       Date:  2016-01-29       Impact factor: 4.792

3.  Why microbes secrete molecules to modify their environment: the case of iron-chelating siderophores.

Authors:  Gabriel E Leventhal; Martin Ackermann; Konstanze T Schiessl
Journal:  J R Soc Interface       Date:  2019-01-31       Impact factor: 4.118

4.  The evolution of bacterial cell size: the internal diffusion-constraint hypothesis.

Authors:  Romain Gallet; Cyrille Violle; Nathalie Fromin; Roula Jabbour-Zahab; Brian J Enquist; Thomas Lenormand
Journal:  ISME J       Date:  2017-04-04       Impact factor: 10.302

5.  Three-Dimensional Structure of the Ultraoligotrophic Marine Bacterium "Candidatus Pelagibacter ubique".

Authors:  Xiaowei Zhao; Cindi L Schwartz; Jason Pierson; Stephen J Giovannoni; J Richard McIntosh; Daniela Nicastro
Journal:  Appl Environ Microbiol       Date:  2017-01-17       Impact factor: 4.792

6.  Phytoplankton growth rate modelling: can spectroscopic cell chemotyping be superior to physiological predictors?

Authors:  Andrea Fanesi; Heiko Wagner; Christian Wilhelm
Journal:  Proc Biol Sci       Date:  2017-02-08       Impact factor: 5.349

7.  Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes.

Authors:  Matthew T Cottrell; David L Kirchman
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

8.  Amino Acid and Sugar Catabolism in the Marine Bacterium Phaeobacter inhibens DSM 17395 from an Energetic Viewpoint.

Authors:  Daniel Wünsch; Kathleen Trautwein; Sabine Scheve; Christina Hinrichs; Christoph Feenders; Bernd Blasius; Dietmar Schomburg; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

9.  Chlorobaculum tepidum Modulates Amino Acid Composition in Response to Energy Availability, as Revealed by a Systematic Exploration of the Energy Landscape of Phototrophic Sulfur Oxidation.

Authors:  Amalie T Levy; Kelvin H Lee; Thomas E Hanson
Journal:  Appl Environ Microbiol       Date:  2016-10-14       Impact factor: 4.792

10.  Temperature Responses of Heterotrophic Bacteria in Co-culture With a Red Sea Synechococcus Strain.

Authors:  Abbrar Labban; Antonio S Palacio; Francisca C García; Ghaida Hadaidi; Mohd I Ansari; Ángel López-Urrutia; Laura Alonso-Sáez; Pei-Ying Hong; Xosé Anxelu G Morán
Journal:  Front Microbiol       Date:  2021-05-10       Impact factor: 5.640

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