Literature DB >> 26194100

Amplification of microsatellite repeat motifs is associated with the evolutionary differentiation and heterochromatinization of sex chromosomes in Sauropsida.

Kazumi Matsubara1,2, Denis O'Meally3, Bhumika Azad3,4, Arthur Georges3, Stephen D Sarre3, Jennifer A Marshall Graves3,5, Yoichi Matsuda6, Tariq Ezaz7.   

Abstract

The sex chromosomes in Sauropsida (reptiles and birds) have evolved independently many times. They show astonishing diversity in morphology ranging from cryptic to highly differentiated sex chromosomes with male (XX/XY) and female heterogamety (ZZ/ZW). Comparing such diverse sex chromosome systems thus provides unparalleled opportunities to capture evolution of morphologically differentiated sex chromosomes in action. Here, we describe chromosomal mapping of 18 microsatellite repeat motifs in eight species of Sauropsida. More than two microsatellite repeat motifs were amplified on the sex-specific chromosome, W or Y, in five species (Bassiana duperreyi, Aprasia parapulchella, Notechis scutatus, Chelodina longicollis, and Gallus gallus) of which the sex-specific chromosomes were heteromorphic and heterochromatic. Motifs (AAGG)n and (ATCC)n were amplified on the W chromosome of Pogona vitticeps and the Y chromosome of Emydura macquarii, respectively. By contrast, no motifs were amplified on the W chromosome of Christinus marmoratus, which is not much differentiated from the Z chromosome. Taken together with previously published studies, our results suggest that the amplification of microsatellite repeats is tightly associated with the differentiation and heterochromatinization of sex-specific chromosomes in sauropsids as well as in other taxa. Although some motifs were common between the sex-specific chromosomes of multiple species, no correlation was observed between this commonality and the species phylogeny. Furthermore, comparative analysis of sex chromosome homology and chromosomal distribution of microsatellite repeats between two closely related chelid turtles, C. longicollis and E. macquarii, identified different ancestry and differentiation history. These suggest multiple evolutions of sex chromosomes in the Sauropsida.

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Year:  2015        PMID: 26194100     DOI: 10.1007/s00412-015-0531-z

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  47 in total

1.  Occupancy of the majority of DNA in the chicken W chromosome by bent-repetitive sequences.

Authors:  Y Saitoh; H Saitoh; K Ohtomo; S Mizuno
Journal:  Chromosoma       Date:  1991-10       Impact factor: 4.316

Review 2.  The evolution of sex chromosomes.

Authors:  B Charlesworth
Journal:  Science       Date:  1991-03-01       Impact factor: 47.728

Review 3.  Transitions between sex-determining systems in reptiles and amphibians.

Authors:  Stephen D Sarre; Tariq Ezaz; Arthur Georges
Journal:  Annu Rev Genomics Hum Genet       Date:  2011       Impact factor: 8.929

4.  An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution.

Authors:  Roman Hobza; Martina Lengerova; Julia Svoboda; Hana Kubekova; Eduard Kejnovsky; Boris Vyskot
Journal:  Chromosoma       Date:  2006-04-13       Impact factor: 4.316

5.  Anolis sex chromosomes are derived from a single ancestral pair.

Authors:  Tony Gamble; Anthony J Geneva; Richard E Glor; David Zarkower
Journal:  Evolution       Date:  2013-12-23       Impact factor: 3.694

6.  Comparative sex chromosome genomics in snakes: differentiation, evolutionary strata, and lack of global dosage compensation.

Authors:  Beatriz Vicoso; J J Emerson; Yulia Zektser; Shivani Mahajan; Doris Bachtrog
Journal:  PLoS Biol       Date:  2013-08-27       Impact factor: 8.029

7.  Identification of avian W-linked contigs by short-read sequencing.

Authors:  Nancy Chen; Daniel W Bellott; David C Page; Andrew G Clark
Journal:  BMC Genomics       Date:  2012-05-14       Impact factor: 3.969

8.  The molecular basis of chromosome orthologies and sex chromosomal differentiation in palaeognathous birds.

Authors:  Chizuko Nishida-Umehara; Yayoi Tsuda; Junko Ishijima; Junko Ando; Atushi Fujiwara; Yoichi Matsuda; Darren K Griffin
Journal:  Chromosome Res       Date:  2007-07-03       Impact factor: 4.620

9.  Highly differentiated ZW sex microchromosomes in the Australian Varanus species evolved through rapid amplification of repetitive sequences.

Authors:  Kazumi Matsubara; Stephen D Sarre; Arthur Georges; Yoichi Matsuda; Jennifer A Marshall Graves; Tariq Ezaz
Journal:  PLoS One       Date:  2014-04-17       Impact factor: 3.240

10.  RNA sequencing reveals sexually dimorphic gene expression before gonadal differentiation in chicken and allows comprehensive annotation of the W-chromosome.

Authors:  Katie L Ayers; Nadia M Davidson; Diana Demiyah; Kelly N Roeszler; Frank Grützner; Andrew H Sinclair; Alicia Oshlack; Craig A Smith
Journal:  Genome Biol       Date:  2013-03-25       Impact factor: 13.583

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  39 in total

Review 1.  Dynamics of vertebrate sex chromosome evolution: from equal size to giants and dwarfs.

Authors:  Manfred Schartl; Michael Schmid; Indrajit Nanda
Journal:  Chromosoma       Date:  2015-12-29       Impact factor: 4.316

2.  Distribution of CR1-like transposable element in woodpeckers (Aves Piciformes): Z sex chromosomes can act as a refuge for transposable elements.

Authors:  Natasha Avila Bertocchi; Thays Duarte de Oliveira; Analía Del Valle Garnero; Rafael Luiz Buogo Coan; Ricardo José Gunski; Cesar Martins; Fabiano Pimentel Torres
Journal:  Chromosome Res       Date:  2018-11-29       Impact factor: 5.239

3.  Conserved sex chromosomes and karyotype evolution in monitor lizards (Varanidae).

Authors:  Alessio Iannucci; Marie Altmanová; Claudio Ciofi; Malcolm Ferguson-Smith; Massimo Milan; Jorge Claudio Pereira; James Pether; Ivan Rehák; Michail Rovatsos; Roscoe Stanyon; Petr Velenský; Petr Ráb; Lukáš Kratochvíl; Martina Johnson Pokorná
Journal:  Heredity (Edinb)       Date:  2019-01-22       Impact factor: 3.821

Review 4.  Repetitive sequences and epigenetic modification: inseparable partners play important roles in the evolution of plant sex chromosomes.

Authors:  Shu-Fen Li; Guo-Jun Zhang; Jin-Hong Yuan; Chuan-Liang Deng; Wu-Jun Gao
Journal:  Planta       Date:  2016-02-26       Impact factor: 4.116

Review 5.  Sex Chromosomes and Master Sex-Determining Genes in Turtles and Other Reptiles.

Authors:  Dominique Thépot
Journal:  Genes (Basel)       Date:  2021-11-19       Impact factor: 4.096

6.  More sex chromosomes than autosomes in the Amazonian frog Leptodactylus pentadactylus.

Authors:  T Gazoni; C F B Haddad; H Narimatsu; D C Cabral-de-Mello; M L Lyra; P P Parise-Maltempi
Journal:  Chromosoma       Date:  2018-01-26       Impact factor: 4.316

7.  Discovery of the youngest sex chromosomes reveals first case of convergent co-option of ancestral autosomes in turtles.

Authors:  E E Montiel; D Badenhorst; J Tamplin; R L Burke; N Valenzuela
Journal:  Chromosoma       Date:  2016-02-03       Impact factor: 4.316

8.  With or Without W? Molecular and Cytogenetic Markers are Not Sufficient for Identification of Environmentally-Induced Sex Reversal in the Bearded Dragon.

Authors:  Jan Ehl; Marie Altmanová; Lukáš Kratochvíl
Journal:  Sex Dev       Date:  2021-03-23       Impact factor: 1.824

9.  High elevation increases the risk of Y chromosome loss in Alpine skink populations with sex reversal.

Authors:  Duminda S B Dissanayake; Clare E Holleley; Janine E Deakin; Arthur Georges
Journal:  Heredity (Edinb)       Date:  2021-02-01       Impact factor: 3.821

10.  Karyotype Evolution and Genomic Organization of Repetitive DNAs in the Saffron Finch, Sicalis flaveola (Passeriformes, Aves).

Authors:  Rafael Kretschmer; Benilson Silva Rodrigues; Suziane Alves Barcellos; Alice Lemos Costa; Marcelo de Bello Cioffi; Analía Del Valle Garnero; Ricardo José Gunski; Edivaldo Herculano Corrêa de Oliveira; Darren K Griffin
Journal:  Animals (Basel)       Date:  2021-05-19       Impact factor: 2.752

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