Literature DB >> 26190869

Chemoenzymatic syntheses of water-soluble lipid I fluorescent probes.

Katsuhiko Mitachi1, Shajila Siricilla1, Lada Klaic2, William M Clemons2, Michio Kurosu1.   

Abstract

Peptidoglycan (PG) is unique to bacteria, and thus, the enzymes responsible for its biosynthesis are promising antibacterial drug targets. The membrane-embedded enzymes in PG remain significant challenges in studying their mechanisms due to the fact that preparations of suitable enzymatic substrates require time-consuming biological transformations or chemical synthesis. Lipid I (prenyl diphosphoryl-MurNAc-pentapeptide) is an important PG biosynthesis intermediate to study the central enzymes, translocase I (MraY/MurX) and MurG. Lipid I isolated from nature contains the C50-or C55-prenyl unit that shows extremely poor water-solubility that renders studies of translocase I and MurG enzymes difficult. We have studied biological transformation of water soluble lipid I fluorescent probes using bacterial membrane fractions and purified MraY enzymes. In our investigation of the minimum structural requirements of the prenyl phosphates in MraY-catalyzed lipid I synthesis, we found that (2Z,6E)-farnesyl phosphate (C15-phosphate) can be recognized by E. coli MraY to generate the water-soluble lipid I fluorescent probes in high-yield. Under the optimized conditions, the same reaction was performed by using the purified MraY from Hydrogenivirga spp. to afford the lipid I analog with high-yield in a short reaction time.

Entities:  

Keywords:  Chemoenzymatic synthesis; Lipid I; Lipid II; MurG; Translocase I (MraY/MurX)

Year:  2015        PMID: 26190869      PMCID: PMC4505380          DOI: 10.1016/j.tetlet.2015.01.044

Source DB:  PubMed          Journal:  Tetrahedron Lett        ISSN: 0040-4039            Impact factor:   2.415


  23 in total

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2.  Identification of active-site inhibitors of MurG using a generalizable, high-throughput glycosyltransferase screen.

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5.  Breaking down the wall: fractionation of mycobacteria.

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6.  Synthesis of ureidomuraymycidine derivatives for structure-activity relationship studies of muraymycins.

Authors:  Bilal A Aleiwi; Christopher M Schneider; Michio Kurosu
Journal:  J Org Chem       Date:  2012-04-06       Impact factor: 4.354

7.  Biosynthesis of a water-soluble lipid I analogue and a convenient assay for translocase I.

Authors:  Shajila Siricilla; Katsuhiko Mitachi; Karolina Skorupinska-Tudek; Ewa Swiezewska; Michio Kurosu
Journal:  Anal Biochem       Date:  2014-06-02       Impact factor: 3.365

8.  Forming cross-linked peptidoglycan from synthetic gram-negative Lipid II.

Authors:  Matthew D Lebar; Tania J Lupoli; Hirokazu Tsukamoto; Janine M May; Suzanne Walker; Daniel Kahne
Journal:  J Am Chem Soc       Date:  2013-03-13       Impact factor: 15.419

9.  Concise synthesis of capuramycin.

Authors:  Michio Kurosu; Kai Li; Dean C Crick
Journal:  Org Lett       Date:  2009-06-04       Impact factor: 6.005

10.  One-pot protection-glycosylation reactions for synthesis of lipid II analogues.

Authors:  Katsuhiko Mitachi; Priya Mohan; Shajila Siricilla; Michio Kurosu
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  6 in total

1.  Substrate Tolerance of Bacterial Glycosyltransferase MurG: Novel Fluorescence-Based Assays.

Authors:  Katsuhiko Mitachi; Hyun Gi Yun; Cody D Gillman; Karolina Skorupinska-Tudek; Ewa Swiezewska; William M Clemons; Michio Kurosu
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Review 2.  Bacterial phosphoglycosyl transferases: initiators of glycan biosynthesis at the membrane interface.

Authors:  Vinita Lukose; Marthe T C Walvoort; Barbara Imperiali
Journal:  Glycobiology       Date:  2017-09-01       Impact factor: 4.313

3.  Fluorescence-based assay for polyprenyl phosphate-GlcNAc-1-phosphate transferase (WecA) and identification of novel antimycobacterial WecA inhibitors.

Authors:  Katsuhiko Mitachi; Shajila Siricilla; Dong Yang; Ying Kong; Karolina Skorupinska-Tudek; Ewa Swiezewska; Scott G Franzblau; Michio Kurosu
Journal:  Anal Biochem       Date:  2016-08-13       Impact factor: 3.365

4.  Oxyma-based phosphates for racemization-free peptide segment couplings.

Authors:  Katsuhiko Mitachi; Yuki E Kurosu; Brandon T Hazlett; Michio Kurosu
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5.  Novel FR-900493 Analogues That Inhibit the Outgrowth of Clostridium difficile Spores.

Authors:  Katsuhiko Mitachi; Hyun Gi Yun; Sara M Kurosu; Shakiba Eslamimehr; Maddie R Lemieux; Lada Klaić; William M Clemons; Michio Kurosu
Journal:  ACS Omega       Date:  2018-02-09

Review 6.  The Membrane Steps of Bacterial Cell Wall Synthesis as Antibiotic Targets.

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Journal:  Antibiotics (Basel)       Date:  2016-08-26
  6 in total

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