Literature DB >> 26185125

Rapid and sensitive detection of Feline immunodeficiency virus using an insulated isothermal PCR-based assay with a point-of-need PCR detection platform.

Rebecca Penrose Wilkes1, Stephen A Kania2, Yun-Long Tsai2, Pei-Yu Alison Lee2, Hsiu-Hui Chang2, Li-Juan Ma2, Hsiao-Fen Grace Chang2, Hwa-Tang Thomas Wang2.   

Abstract

Feline immunodeficiency virus (FIV) is an important infectious agent of cats. Clinical syndromes resulting from FIV infection include immunodeficiency, opportunistic infections, and neoplasia. In our study, a 5' long terminal repeat/gag region-based reverse transcription insulated isothermal polymerase chain reaction (RT-iiPCR) was developed to amplify all known FIV strains to facilitate point-of-need FIV diagnosis. The RT-iiPCR method was applied in a point-of-need PCR detection platform--a field-deployable device capable of generating automatically interpreted RT-iiPCR results from nucleic acids within 1 hr. Limit of detection 95% of FIV RT-iiPCR was calculated to be 95 copies standard in vitro transcription RNA per reaction. Endpoint dilution studies with serial dilutions of an ATCC FIV type strain showed that the sensitivity of lyophilized FIV RT-iiPCR reagent was comparable to that of a reference nested PCR. The established reaction did not amplify any nontargeted feline pathogens, including Felid herpesvirus 1, feline coronavirus, Feline calicivirus, Feline leukemia virus, Mycoplasma haemofelis, and Chlamydophila felis. Based on analysis of 76 clinical samples (including blood and bone marrow) with the FIV RT-iiPCR, test sensitivity was 97.78% (44/45), specificity was 100.00% (31/31), and agreement was 98.65% (75/76), determined against a reference nested-PCR assay. A kappa value of 0.97 indicated excellent correlation between these 2 methods. The lyophilized FIV RT-iiPCR reagent, deployed on a user-friendly portable device, has potential utility for rapid and easy point-of-need detection of FIV in cats.
© 2015 The Author(s).

Entities:  

Keywords:  Detection; Feline immunodeficiency virus; insulated isothermal polymerase chain reaction; point of need

Mesh:

Substances:

Year:  2015        PMID: 26185125     DOI: 10.1177/1040638715593597

Source DB:  PubMed          Journal:  J Vet Diagn Invest        ISSN: 1040-6387            Impact factor:   1.279


  12 in total

1.  Rapid screening of roundup ready soybean in food samples by a hand-held PCR device.

Authors:  Hsiang-Yun Tung; Sue-Hong Wang; Yu-Cheng Chiang; Ming-Shiun Tsai
Journal:  Food Sci Biotechnol       Date:  2016-08-31       Impact factor: 2.391

2.  A Pan-Dengue Virus Reverse Transcription-Insulated Isothermal PCR Assay Intended for Point-of-Need Diagnosis of Dengue Virus Infection by Use of the POCKIT Nucleic Acid Analyzer.

Authors:  Yun Young Go; R P V Jayanthe Rajapakse; Senanayake A M Kularatne; Pei-Yu Alison Lee; Keun Bon Ku; Sangwoo Nam; Pin-Hsing Chou; Yun-Long Tsai; Yu-Lun Liu; Hsiao-Fen Grace Chang; Hwa-Tang Thomas Wang; Udeni B R Balasuriya
Journal:  J Clin Microbiol       Date:  2016-03-30       Impact factor: 5.948

3.  Performance of 4 Point-of-Care Screening Tests for Feline Leukemia Virus and Feline Immunodeficiency Virus.

Authors:  J K Levy; P Cynda Crawford; S J Tucker
Journal:  J Vet Intern Med       Date:  2017-02-03       Impact factor: 3.333

4.  Rapid and sensitive insulated isothermal PCR for point-of-need feline leukaemia virus detection.

Authors:  Rebecca P Wilkes; Eman Anis; Dawn Dunbar; Pei-Yu A Lee; Yun-Long Tsai; Fu-Chun Lee; Hsiao-Fen G Chang; Hwa-Tang T Wang; Elizabeth M Graham
Journal:  J Feline Med Surg       Date:  2017-06-07       Impact factor: 2.015

5.  Evaluation of a field-deployable reverse transcription-insulated isothermal PCR for rapid and sensitive on-site detection of Zika virus.

Authors:  Mariano Carossino; Yanqiu Li; Pei-Yu A Lee; Chuan-Fu Tsai; Pin-Hsing Chou; Dennis Williams; Ashley Skillman; R Frank Cook; Grayson Brown; Hsiao-Fen G Chang; Hwa-Tang T Wang; Udeni B R Balasuriya
Journal:  BMC Infect Dis       Date:  2017-12-19       Impact factor: 3.090

6.  Evaluation and Clinical Validation of Two Field-Deployable Reverse Transcription-Insulated Isothermal PCR Assays for the Detection of the Middle East Respiratory Syndrome-Coronavirus.

Authors:  Yun Young Go; Yeon-Sook Kim; Shinhye Cheon; Sangwoo Nam; Keun Bon Ku; Meehyein Kim; Nam Hyuk Cho; Hyun Park; Pei-Yu Alison Lee; Yu-Chun Lin; Yun-Long Tsai; Hwa-Tang Thomas Wang; Udeni B R Balasuriya
Journal:  J Mol Diagn       Date:  2017-08-12       Impact factor: 5.568

7.  Rapid and sensitive detection of Mycoplasma synoviae by an insulated isothermal polymerase chain reaction-based assay on a field-deployable device.

Authors:  Hung-Chih Kuo; Dan-Yuan Lo; Chiou-Lin Chen; Yun-Long Tsai; Jia-Fong Ping; Chien-Hsien Lee; Pei-Yu Alison Lee; Hsiao-Fen Grace Chang
Journal:  Poult Sci       Date:  2016-07-07       Impact factor: 3.352

8.  Rapid Diagnosis of Babesia gibsoni by Point-of-Need Testing by Insulated Isothermal PCR in Dogs at High Risk of Infection.

Authors:  K L Cooke; P Frenzer; S J Tucker; P C Crawford; S K Kirk; J K Levy
Journal:  J Vet Intern Med       Date:  2018-01       Impact factor: 3.333

9.  Rapid identification of melioidosis agent by an insulated isothermal PCR on a field-deployable device.

Authors:  Kek Heng Chua; E Wei Tan; Hwa Chia Chai; S D Puthucheary; Ping Chin Lee; Suat Moi Puah
Journal:  PeerJ       Date:  2020-05-27       Impact factor: 2.984

10.  Evaluation of two singleplex reverse transcription-Insulated isothermal PCR tests and a duplex real-time RT-PCR test for the detection of porcine epidemic diarrhea virus and porcine deltacoronavirus.

Authors:  Jianqiang Zhang; Yun-Long Tsai; Pei-Yu Alison Lee; Qi Chen; Yan Zhang; Cheng-Jen Chiang; Yu-Han Shen; Fu-Chun Li; Hsiao-Fen Grace Chang; Phillip C Gauger; Karen M Harmon; Hwa-Tang Thomas Wang
Journal:  J Virol Methods       Date:  2016-04-06       Impact factor: 2.014

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