Literature DB >> 26175750

The use of comet assay in plant toxicology: recent advances.

Conceição L V Santos1, Bertrand Pourrut2, José M P Ferreira de Oliveira3.   

Abstract

The systematic study of genotoxicity in plants induced by contaminants and other stress agents has been hindered to date by the lack of reliable and robust biomarkers. The comet assay is a versatile and sensitive method for the evaluation of DNA damages and DNA repair capacity at single-cell level. Due to its simplicity and sensitivity, and the small number of cells required to obtain robust results, the use of plant comet assay has drastically increased in the last decade. For years its use was restricted to a few model species, e.g., Allium cepa, Nicotiana tabacum, Vicia faba, or Arabidopsis thaliana but this number largely increased in the last years. Plant comet assay has been used to study the genotoxic impact of radiation, chemicals including pesticides, phytocompounds, heavy metals, nanoparticles or contaminated complex matrices. Here we will review the most recent data on the use of this technique as a standard approach for studying the genotoxic effects of different stress conditions on plants. Also, we will discuss the integration of information provided by the comet assay with other DNA-damage indicators, and with cellular responses including oxidative stress, cell division or cell death. Finally, we will focus on putative relations between transcripts related with DNA damage pathways, DNA replication and repair, oxidative stress and cell cycle progression that have been identified in plant cells with comet assays demonstrating DNA damage.

Entities:  

Keywords:  DNA damages biomarkers; genotoxicity; metal; nanoparticles; phytocompounds; plant comet assay; pollutants; radiation

Year:  2015        PMID: 26175750      PMCID: PMC4485349          DOI: 10.3389/fgene.2015.00216

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  117 in total

1.  Toxicological characterization of the landfill leachate prior/after chemical and electrochemical treatment: a study on human and plant cells.

Authors:  Vera Garaj-Vrhovac; Višnja Oreščanin; Goran Gajski; Marko Gerić; Damir Ruk; Robert Kollar; Sandra Radić Brkanac; Petra Cvjetko
Journal:  Chemosphere       Date:  2013-06-20       Impact factor: 7.086

2.  Copper-induced root growth inhibition of Allium cepa var. agrogarum L. involves disturbances in cell division and DNA damage.

Authors:  Rong Qin; Congyue Wang; Da Chen; Lars O Björn; Shaoshan Li
Journal:  Environ Toxicol Chem       Date:  2015-03-30       Impact factor: 3.742

3.  DNA damage induced by mutagens in plant and human cell nuclei in acellular comet assay.

Authors:  Jolanta Juchimiuk; Agnieszka Gnys; Jolanta Maluszynska
Journal:  Folia Histochem Cytobiol       Date:  2006       Impact factor: 1.698

4.  Lycopene from tomatoes: vesicular nanocarrier formulations for dermal delivery.

Authors:  Andreia Ascenso; Sónia Pinho; Carla Eleutério; Fabíola Garcia Praça; Maria Vitória Lopes Badra Bentley; Helena Oliveira; Conceição Santos; Olga Silva; Sandra Simões
Journal:  J Agric Food Chem       Date:  2013-07-17       Impact factor: 5.279

5.  Evaluation of photo-induced cellular damage using photoautotrophic cultures of puk-bung hairy roots as a sensing tool.

Authors:  Motomu Nishioka; Yoshihiro Ojima; Yuki Tsushima; Masahiro Matsumoto; Masahito Taya
Journal:  J Biosci Bioeng       Date:  2009-10-20       Impact factor: 2.894

6.  Comparative study on elemental composition and DNA damage in leaves of a weedy plant species, Cassia occidentalis, growing wild on weathered fly ash and soil.

Authors:  Amit Love; Rajesh Tandon; B D Banerjee; C R Babu
Journal:  Ecotoxicology       Date:  2009-05-30       Impact factor: 2.823

7.  Aluminum induces oxidative burst, cell wall NADH peroxidase activity, and DNA damage in root cells of Allium cepa L.

Authors:  V Mohan M Achary; Narasimham L Parinandi; Brahma B Panda
Journal:  Environ Mol Mutagen       Date:  2012-08-02       Impact factor: 3.216

8.  Involvement of AtPolλ in the repair of high salt- and DNA cross-linking agent-induced double strand breaks in Arabidopsis.

Authors:  Sujit Roy; Swarup Roy Choudhury; Dibyendu N Sengupta; Kali Pada Das
Journal:  Plant Physiol       Date:  2013-05-09       Impact factor: 8.340

9.  CDKB2 is involved in mitosis and DNA damage response in rice.

Authors:  Masaki Endo; Shigeki Nakayama; Chikage Umeda-Hara; Namie Ohtsuki; Hiroaki Saika; Masaaki Umeda; Seiichi Toki
Journal:  Plant J       Date:  2011-12-15       Impact factor: 6.417

10.  CdSe/ZnS quantum dots trigger DNA repair and antioxidant enzyme systems in Medicago sativa cells in suspension culture.

Authors:  Ana R Santos; Ana S Miguel; Anca Macovei; Christopher Maycock; Alma Balestrazzi; Abel Oliva; Pedro Fevereiro
Journal:  BMC Biotechnol       Date:  2013-12-20       Impact factor: 2.563

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  11 in total

1.  Genotoxic endpoints in a Pb-accumulating pea cultivar: insights into Pb2+ contamination limits.

Authors:  Eleazar Rodriguez; Márcia Sousa; Anicia Gomes; Raquel Azevedo; Nuno Mariz-Ponte; Sara Sario; Rafael José Mendes; Conceição Santos
Journal:  Environ Sci Pollut Res Int       Date:  2019-10-11       Impact factor: 4.223

2.  Detection of genotoxic effects of drinking water disinfection by-products using Vicia faba bioassay.

Authors:  Yu Hu; Li Tan; Shao-Hui Zhang; Yu-Ting Zuo; Xue Han; Na Liu; Wen-Qing Lu; Ai-Lin Liu
Journal:  Environ Sci Pollut Res Int       Date:  2016-10-26       Impact factor: 4.223

3.  Determination of genotoxic damages of picloram and dicamba with comet assay in Allium cepa rooted in tissue culture and distilled water.

Authors:  Cigdem Alev Ozel; Fatma Unal; Ece Avuloglu-Yilmaz; Esra Erikel; Semra Mirici; Deniz Yuzbasioglu
Journal:  Mol Biol Rep       Date:  2022-07-08       Impact factor: 2.316

4.  TUNEL Assay to Assess Extent of DNA Fragmentation and Programmed Cell Death in Root Cells under Various Stress Conditions.

Authors:  Amit K Tripathi; Ashwani Pareek; Sneh Lata Singla-Pareek
Journal:  Bio Protoc       Date:  2017-08-20

Review 5.  Nanomaterials Induced Genotoxicity in Plant: Methods and Strategies.

Authors:  Marta Marmiroli; Nelson Marmiroli; Luca Pagano
Journal:  Nanomaterials (Basel)       Date:  2022-05-12       Impact factor: 5.719

6.  Cytogenetic and genotoxic effects of 2-chlorophenol on Allium cepa L. root meristem cells.

Authors:  Derya Küçük; Recep Liman
Journal:  Environ Sci Pollut Res Int       Date:  2018-10-24       Impact factor: 4.223

Review 7.  Comet assay: a versatile but complex tool in genotoxicity testing.

Authors:  Eugenia Cordelli; Margherita Bignami; Francesca Pacchierotti
Journal:  Toxicol Res (Camb)       Date:  2021-01-05       Impact factor: 3.524

8.  Superparamagnetic hematite nanoparticle: Cytogenetic impact on onion roots and seed germination response of major crop plants.

Authors:  Kalyani Rath; Parameswari Ranganathan; Rashmi Kanugodu Vasappa; Sridharan Thalaivarisai Balasundaram
Journal:  IET Nanobiotechnol       Date:  2020-04       Impact factor: 1.847

9.  The comet assay: past, present, and future.

Authors:  Sabine A S Langie; Amaya Azqueta; Andrew R Collins
Journal:  Front Genet       Date:  2015-08-13       Impact factor: 4.599

10.  Isolation of Mesophyll Protoplasts from Mediterranean Woody Plants for the Study of DNA Integrity under Abiotic Stress.

Authors:  Elena Kuzminsky; Roberta Meschini; Serena Terzoli; Liliana Pavani; Cristian Silvestri; Zineb Choury; Giuseppe Scarascia-Mugnozza
Journal:  Front Plant Sci       Date:  2016-08-15       Impact factor: 5.753

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