Literature DB >> 26170331

The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms.

Rubén Gustavo Schlaen1, Estefanía Mancini1, Sabrina Elena Sanchez1, Soledad Perez-Santángelo1, Matías L Rugnone1, Craig G Simpson2, John W S Brown3, Xu Zhang4, Ariel Chernomoretz1, Marcelo J Yanovsky5.   

Abstract

The mechanisms by which poikilothermic organisms ensure that biological processes are robust to temperature changes are largely unknown. Temperature compensation, the ability of circadian rhythms to maintain a relatively constant period over the broad range of temperatures resulting from seasonal fluctuations in environmental conditions, is a defining property of circadian networks. Temperature affects the alternative splicing (AS) of several clock genes in fungi, plants, and flies, but the splicing factors that modulate these effects to ensure clock accuracy throughout the year remain to be identified. Here we show that GEMIN2, a spliceosomal small nuclear ribonucleoprotein assembly factor conserved from yeast to humans, modulates low temperature effects on a large subset of pre-mRNA splicing events. In particular, GEMIN2 controls the AS of several clock genes and attenuates the effects of temperature on the circadian period in Arabidopsis thaliana. We conclude that GEMIN2 is a key component of a posttranscriptional regulatory mechanism that ensures the appropriate acclimation of plants to daily and seasonal changes in temperature conditions.

Entities:  

Keywords:  Arabidopsis; GEMIN2; alternative splicing; circadian rhythms; spliceosome assembly

Mesh:

Substances:

Year:  2015        PMID: 26170331      PMCID: PMC4522771          DOI: 10.1073/pnas.1504541112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

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Authors:  C Robertson McClung; Seth J Davis
Journal:  Curr Biol       Date:  2010-12-21       Impact factor: 10.834

2.  The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation.

Authors:  Patrice A Salomé; Detlef Weigel; C Robertson McClung
Journal:  Plant Cell       Date:  2010-11-23       Impact factor: 11.277

3.  Structure and expression of a plant U1 snRNP 70K gene: alternative splicing of U1 snRNP 70K pre-mRNAs produces two different transcripts.

Authors:  M Golovkin; A S Reddy
Journal:  Plant Cell       Date:  1996-08       Impact factor: 11.277

4.  Circadian clock mutants in Arabidopsis identified by luciferase imaging.

Authors:  A J Millar; I A Carré; C A Strayer; N H Chua; S A Kay
Journal:  Science       Date:  1995-02-24       Impact factor: 47.728

5.  Regulation of alternative splicing by the core spliceosomal machinery.

Authors:  Arneet L Saltzman; Qun Pan; Benjamin J Blencowe
Journal:  Genes Dev       Date:  2011-02-15       Impact factor: 11.361

6.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

7.  Gene targeting of Gemin2 in mice reveals a correlation between defects in the biogenesis of U snRNPs and motoneuron cell death.

Authors:  Sibylle Jablonka; Bettina Holtmann; Gunter Meister; Michael Bandilla; Wilfried Rossoll; Utz Fischer; Michael Sendtner
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-28       Impact factor: 11.205

8.  Genome-wide mapping of alternative splicing in Arabidopsis thaliana.

Authors:  Sergei A Filichkin; Henry D Priest; Scott A Givan; Rongkun Shen; Douglas W Bryant; Samuel E Fox; Weng-Keen Wong; Todd C Mockler
Journal:  Genome Res       Date:  2009-10-26       Impact factor: 9.043

9.  Role for LSM genes in the regulation of circadian rhythms.

Authors:  Soledad Perez-Santángelo; Estefanía Mancini; Lauren J Francey; Ruben Gustavo Schlaen; Ariel Chernomoretz; John B Hogenesch; Marcelo J Yanovsky
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-06       Impact factor: 11.205

10.  Structure of a key intermediate of the SMN complex reveals Gemin2's crucial function in snRNP assembly.

Authors:  Rundong Zhang; Byung Ran So; Pilong Li; Jeongsik Yong; Tina Glisovic; Lili Wan; Gideon Dreyfuss
Journal:  Cell       Date:  2011-08-05       Impact factor: 41.582

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  37 in total

Review 1.  Molecular mechanisms at the core of the plant circadian oscillator.

Authors:  Maria A Nohales; Steve A Kay
Journal:  Nat Struct Mol Biol       Date:  2016-12-06       Impact factor: 15.369

2.  Rhythmic Behavior Is Controlled by the SRm160 Splicing Factor in Drosophila melanogaster.

Authors:  Esteban J Beckwith; Carlos E Hernando; Sofía Polcowñuk; Agustina P Bertolin; Estefania Mancini; M Fernanda Ceriani; Marcelo J Yanovsky
Journal:  Genetics       Date:  2017-08-11       Impact factor: 4.562

Review 3.  Diverse role of survival motor neuron protein.

Authors:  Ravindra N Singh; Matthew D Howell; Eric W Ottesen; Natalia N Singh
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-01-15       Impact factor: 4.490

4.  The circadian clock shapes the Arabidopsis transcriptome by regulating alternative splicing and alternative polyadenylation.

Authors:  Yuchen Yang; Yun Li; Aziz Sancar; Onur Oztas
Journal:  J Biol Chem       Date:  2020-04-17       Impact factor: 5.157

5.  Compensatory Mutations in GI and ZTL May Modulate Temperature Compensation in the Circadian Clock.

Authors:  Tae-Sung Kim; Lei Wang; Yeon Jeong Kim; David E Somers
Journal:  Plant Physiol       Date:  2019-11-18       Impact factor: 8.340

6.  Arabidopsis SME1 Regulates Plant Development and Response to Abiotic Stress by Determining Spliceosome Activity Specificity.

Authors:  Raul Huertas; Rafael Catalá; José M Jiménez-Gómez; M Mar Castellano; Pedro Crevillén; Manuel Piñeiro; José A Jarillo; Julio Salinas
Journal:  Plant Cell       Date:  2019-01-29       Impact factor: 11.277

7.  Environment-dependent regulation of spliceosome activity by the LSM2-8 complex in Arabidopsis.

Authors:  Cristian Carrasco-López; Tamara Hernández-Verdeja; Carlos Perea-Resa; David Abia; Rafael Catalá; Julio Salinas
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

8.  The Arabidopsis sickle Mutant Exhibits Altered Circadian Clock Responses to Cool Temperatures and Temperature-Dependent Alternative Splicing.

Authors:  Carine M Marshall; Virginia Tartaglio; Maritza Duarte; Frank G Harmon
Journal:  Plant Cell       Date:  2016-09-13       Impact factor: 11.277

9.  Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome.

Authors:  Cristiane P G Calixto; Wenbin Guo; Allan B James; Nikoleta A Tzioutziou; Juan Carlos Entizne; Paige E Panter; Heather Knight; Hugh G Nimmo; Runxuan Zhang; John W S Brown
Journal:  Plant Cell       Date:  2018-05-15       Impact factor: 11.277

10.  SPF45-related splicing factor for phytochrome signaling promotes photomorphogenesis by regulating pre-mRNA splicing in Arabidopsis.

Authors:  Ruijiao Xin; Ling Zhu; Patrice A Salomé; Estefania Mancini; Carine M Marshall; Frank G Harmon; Marcelo J Yanovsky; Detlef Weigel; Enamul Huq
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

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