| Literature DB >> 26159428 |
Tessel E Galesloot1, Luc L Janss2, Stephen Burgess3, Lambertus A L M Kiemeney4, Martin den Heijer5, Jacqueline de Graaf6, Suzanne Holewijn7,8, Beben Benyamin9,10, John B Whitfield11, Dorine W Swinkels12, Sita H Vermeulen13.
Abstract
BACKGROUND: Previous reports suggested a role for iron and hepcidin in atherosclerosis. Here, we evaluated the causality of these associations from a genetic perspective via (i) a Mendelian randomization (MR) approach, (ii) study of association of atherosclerosis-related single nucleotide polymorphisms (SNPs) with iron and hepcidin, and (iii) estimation of genomic correlations between hepcidin, iron and atherosclerosis.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26159428 PMCID: PMC4498499 DOI: 10.1186/s12863-015-0246-4
Source DB: PubMed Journal: BMC Genet ISSN: 1471-2156 Impact factor: 2.797
Figure 1Twelve SNPs identified in meta-GWAS for iron parameters and included in the Mendelian randomization analysis. Betas ± standard error for serum iron, transferrin, transferrin saturation (TS), and ferritin (log) based on the meta-analyses of genome-wide association studies on iron status performed by the Genetics of Iron Status Consortium (discovery and replication combined (N = 48,972)). a SNPs that are hypothesized to increase the risk of atherosclerosis according to the ‘iron hypothesis’; (b) SNPs that are hypothesized to decrease the risk of atherosclerosis according to the ‘iron hypothesis’; (c) SNPs for which the hypothesized effect on atherosclerosis risk is unknown
Characteristics of the study population
| Variable† | Total N | Median (P5-P95) or N (%)* |
|---|---|---|
| Gender, males | 1819 | 900 (49 %) |
| Age at inclusion, years | 1819 | 62.9 (42.2–76.0) |
| Time of blood sampling | 1811 | |
| Before 12:00 pm | 374 (21 %) | |
| Between 12:00 pm and 5:00 pm | 1165 (64 %) | |
| After 5:00 pm | 272 (15 %) | |
| Serum hepcidin, nmoles/L | 1810 | 7.5 (0.9–22.5) |
| Serum ferritin, μg/L | 1817 | 120.7 (17.8–421.4) |
| Hepcidin/ferritin, μmoles/μg | 1808 | 60.3 (20.9–170.3) |
| Hepcidin/TS, μmoles/L/% | 1791 | 0.25 (0.04–0.96) |
| Serum iron, μmoles/L | 1800 | 17.0 (9.0–27.0) |
| TIBC, μmoles/L | 1800 | 58.0 (46.0–75.0) |
| TS, % | 1800 | 28.8 (14.1–48.1) |
| IMT, mm | 549 | 0.85 (0.70–1.05) |
| ABI at rest | 549 | 1.10 (0.96–1.27) |
| ABI after exercise | 542 | 1.11 (0.76–1.34) |
| Presence of plaque | 549 | 232 (42 %) |
ABI indicates ankle-brachial index, IMT intima media thickness, N number, P5 fifth percentile, P95 95th percentile, TIBC total iron-binding capacity; and TS transferrin saturation
*Continuous variables are presented as median (P5-P95). Categorical variables are presented as N (%)
†Hepcidin, ferritin, hepcidin/ferritin, hepcidin/TS, iron, TIBC, TS and time of blood sampling were measured in 2002 and presence of plaque, IMT, and ABI at rest and after exercise were measured between 2005 and 2008
Association of the iron-related SNPs with non-invasive measurements of atherosclerosis
| Presence of plaque | IMT | ABI at rest | ABI after exercise | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP – Tested allele | CHR:BP (Build 37) | Freq | H* | OR | 95 % CI | H* | Beta | 95 % CI | H* | Beta | 95 % CI | H* | Beta | 95 % CI |
| Multi-SNP score | ||||||||||||||
| Q1 | Ref | Ref | Ref | Ref | Ref | Ref | Ref | Ref | Ref | Ref | Ref | Ref | ||
| Q2 | >1 | 1.06 | 0.66; 1.71 | + | −0.024 | −0.051; 0.002 | - | 0.003 | −0.022; 0.028 | - | −0.024 | −0.051; 0.002 | ||
| Q3 | >1 | 0.82 | 0.51; 1.34 | + | −0.007 | −0.034; 0.020 | - | 0.005 | −0.021; 0.030 | - | −0.007 | −0.034; 0.020 | ||
| Q4 | >1 | 1.13 | 0.70; 1.82 | + | 0.009 | −0.018; 0.036 | - | 0.003 | −0.022; 0.028 | - | 0.009 | −0.018; 0.036 | ||
| rs744653 – T | 2:190,378,750 | 0.86 | <1 | 1.10 | 0.78; 1.55 | - | −0.006 | −0.025; 0.014 | + | −0.013 | −0.031; 0.005 | + | −0.019 | −0.052; 0.014 |
| rs8177240 – T† | 3:133,477,701 | 0.66 | ? | 1.13 | 0.87; 1.46 | ? | −0.010 | −0.025; 0.004 | ? |
|
| ? |
|
|
| rs9990333 – T | 3:195,827,205 | 0.47 | >1 |
|
| + | 0.012 | −0.002; 0.025 | - | 0.006 | −0.006; 0.019 | - | 0.016 | −0.007; 0.040 |
| rs1800562 – A | 6: 26,093,141 | 0.06 | >1 | 1.03 | 0.62; 1.69 | + | −0.017 | −0.045; 0.011 | - | −0.006 | −0.032; 0.020 | - | −0.005 | −0.054; 0.043 |
| rs1799945 – C | 6: 26,091,179 | 0.84 | <1 | 1.19 | 0.86; 1.64 | - | 0.011 | −0.007; 0.029 | + | 0.003 | −0.014; 0.019 | + | −0.006 | −0.037; 0.024 |
| rs7385804 – A | 7: 100,235,970 | 0.64 | >1 | 0.92 | 0.72; 1.18 | + | −0.006 | −0.020; 0.008 | - | 0.000 | −0.013; 0.013 | - | 0.018 | −0.006; 0.042 |
| rs4921915 – A‡ | 8: 18,272,466 | 0.78 | ? |
|
| ? | −0.006 | −0.023; 0.010 | ? | 0.002 | −0.014; 0.017 | ? | 0.005 | −0.023; 0.034 |
| rs651007 – T | 9: 136,153,875 | 0.20 | <1 | 0.84 | 0.62; 1.15 | - |
|
| + | 0.003 | −0.013; 0.019 | + |
|
|
| rs6486121 – T‡ | 11: 13,355,770 | 0.64 | ? | 0.94 | 0.73; 1.20 | ? | 0.012 | −0.002; 0.026 | ? | −0.004 | −0.017; 0.009 | ? | −0.007 | −0.031; 0.018 |
| rs174577 – A‡ | 11: 61,604,814 | 0.32 | ? | 1.10 | 0.85; 1.42 | ? | 0.001 | −0.013; 0.015 | ? | 0.004 | −0.009; 0.017 | ? | 0.015 | −0.009; 0.040 |
| rs411988 – A | 17: 56,709,034 | 0.58 | <1 | 0.92 | 0.73;1.17 | - | −0.001 | −0.015; 0.012 | + | 0.004 | −0.008; 0.017 | + | −0.010 | −0.033; 0.013 |
| rs855791 – A | 22: 37,462,936 | 0.46 | <1 | 1.20 | 0.94; 1.54 | - | −0.010 | −0.023; 0.004 | + | 0.005 | −0.008; 0.018 | + | 0.010 | −0.013; 0.034 |
Associations were tested using logistic (presence of plaque) and linear regression (IMT and ABI at rest and after exercise). Resulting odds ratios (OR) of logistic models for the multi-SNP score express the change in odds for presence of plaque relative to Q1. Resulting betas of linear models for the multi-SNP score express the change in IMT or ABI using Q1 as a reference, thus Q2 vs Q1, Q3 vs Q1 and Q4 vs Q1. Resulting ORs of logistic regression models for the single SNP analyses express the effect of each extra tested allele on odds for presence of plaque. Resulting betas of linear models for the single SNP analyses express the effect of each extra tested allele on IMT or ABI. Tested alleles are the same as in the original publication [23]. Nominally significant associations are indicated in bold
ABI indicates ankle-brachial index, CHR:BP chromosome:base-pair position, CI confidence interval, Freq frequency of tested allele, H hypothesized effect, IMT intima media thickness, OR odds ratio, Ref reference, Q quartile, SNP single nucleotide polymorphism
*Hypothesized effect on the NIMA according to the ‘iron hypothesis’ (see Fig. 1). Presence of plaque, a higher IMT and a lower ABI indicate presence of atherosclerosis
†This SNP decreases iron and transferrin and increases TS, so the hypothesized effect on atherosclerosis is unknown
‡These SNPs only show association with transferrin, so the hypothesized effect on atherosclerosis is unknown
Genomic correlations (SE) estimated with GCTA
| Presence of plaque | IMT | ABI at rest | ABI after exercise | |
|---|---|---|---|---|
| Hepcidin | 0.18 (1.48) | 0.11 (1.49) | 0.01 (1.29) | 0.02 (1.40) |
| Ferritin | 0.15 (1.49) | −1.00 (4.74) | 1.00 (38.1) | 0.01 (1.45) |
| Hepcidin/ferritin | −1.00 (4.35) | 0.09 (4.35) | −1.00 (>4E5) | 0.25 (2.39) |
| Hepcidin/TS | −1.00 (15.38) | −1.00 (4.87) | 0.02 (1.37) | 0.01 (1.24) |
| Iron | 0.05 (1.53) | 1.00 (4.18) | 0.08 (1.05) | −1.00 (38.1) |
| TIBC | 1.00 (17.3) | 0.04 (1.16) | 1.00 (55.5) | −1.00 (113.7) |
| TS | 0.06 (1.36) | 1.00 (147.7) | 0.06 (0.96) | 1.00 (>1E5) |
ABI indicates ankle-brachial index, IMT intima media thickness, SE standard error, TIBC total iron-binding capacity; and TS transferrin saturation
Genomic correlations (SE) estimated with Bayz
| Presence of plaque | IMT | ABI at rest | ABI after exercise | |
|---|---|---|---|---|
| Hepcidin* | 0.01 (0.27) | −0.01 (0.31) | −0.27 (0.34) | −0.29 (0.34) |
| Ferritin* | −0.03 (0.28) | 0.01 (0.32) | −0.22 (0.35) | −0.30 (0.35) |
| Hepcidin/ferritin† | 0.06 (0.21) | −0.02 (0.24) | −0.10 (0.27) | −0.01 (0.28) |
| Hepcidin/TS‡ | 0.12 (0.19) | 0.10 (0.21) | −0.07 (0.27) | 0.03 (0.29) |
| Iron* | −0.04 (0.20) | 0.06 (0.21) | 0.04 (0.25) | 0.09 (0.26) |
| TIBC* | −0.01 (0.14) | 0.04 (0.15) | −0.08 (0.16) | −0.07 (0.17) |
| TS§ | −0.01 (0.19) | 0.00 (0.19) | 0.05 (0.21) | 0.04 (0.22) |
ABI indicates ankle-brachial index, IMT intima media thickness, SE standard error, TIBC total iron-binding capacity, and TS transferrin saturation
*Correlations in these rows come from an 8-trait analysis including hepcidin, ferritin, iron, TIBC, presence of plaque, IMT, ABI at rest and ABI after exercise
†Correlations in this row come from a 7-trait analysis including the ratio hepcidin/ferritin, iron, TIBC, presence of plaque, IMT, ABI at rest and ABI after exercise
‡Correlations in this row come from a 6-trait analysis including the ratio hepcidin/TS, ferritin, presence of plaque, IMT, ABI at rest and ABI after exercise
§Correlations in this row come from a 7-trait analysis including hepcidin, ferritin, TS, presence of plaque, IMT, ABI at rest and ABI after exercise
Summary of evidence for and against a role of hepcidin and the iron parameters in atherosclerosis resulting from this study
| Trait | Evidence for causal role | Evidence against causal role |
|---|---|---|
| Hepcidin | Weak genomic correlations with ABI at rest and ABI after exercise | - No nominally significant associations with all NIMA-related SNPs |
| - Genomic correlations with presence of plaque and IMT ~0 | ||
| Ferritin | - Directionally consistent associations of the multi-SNP score with NIMA in women | - No directionally consistent associations of the multi-SNP score with NIMA in men |
| - Directionally consistent associations of rs651007 with NIMA | -No directionally consistent associations of other variants than rs651007 (notably rs411988) with NIMA | |
| - Weak genomic correlations with ABI at rest and ABI after exercise | ||
| - No nominally significant associations with all NIMA-related SNPs | ||
| - Genomic correlations with presence of plaque and IMT ~0 | ||
| Hepcidin/ferritin | Nominally significant associations with two NIMA-related SNPs | - No nominally significant associations with four NIMA-related SNPs |
| - Genomic correlations with all NIMA ~0 | ||
| Hepcidin/TS | - No nominally significant associations with all NIMA-related SNPs | |
| - Genomic correlations with all NIMA ~0 | ||
| Iron | - Directionally consistent associations of the multi-SNP score with NIMA in women | - No directionally consistent associations of the multi-SNP score with NIMA in men |
| - No directionally consistent associations of iron-related SNPs with NIMA | ||
| - No nominally significant associations with all NIMA-related SNPs | ||
| - Genomic correlations with all NIMA ~0 | ||
| TIBC | - Directionally consistent associations of the multi-SNP score with NIMA in women | - No directionally consistent associations of the multi-SNP score with NIMA in men |
| - No directionally consistent associations of iron-related SNPs with NIMA | ||
| - No nominally significant associations with all NIMA-related SNPs | ||
| - Genomic correlations with all NIMA ~0 | ||
| TS | - Directionally consistent associations of the multi-SNP score with NIMA in women | - No directionally consistent associations of the multi-SNP score with NIMA in men |
| - No directionally consistent associations of iron-related SNPs with NIMA | ||
| - No nominally significant associations with all NIMA-related SNPs | ||
| - Genomic correlations with all NIMA ~0 |
ABI indicates ankle-brachial index, IMT intima media thickness, NIMA non-invasive measurement of atherosclerosis, SNP single nucleotide polymorphism, TIBC total iron-binding capacity, and TS transferrin saturation