Literature DB >> 26157149

Support from Phylogenomic Networks and Subspecies Signatures for Separation of Mycobacterium massiliense from Mycobacterium bolletii.

Joon Liang Tan1, Yun Fong Ngeow2, Siew Woh Choo3.   

Abstract

Mycobacterium abscessus subspecies classification has important clinical implications. We used phylogenomic network and amino acid analyses to provide evidence for the separation of Mycobacterium bolletii and Mycobacterium massiliense into two distinct subspecies which can potentially be differentiated rapidly by their protein signatures.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID： 26157149      PMCID： PMC4540909          DOI： 10.1128/JCM.00541-15

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  19 in total

1.  An unusual acid-fast infection of the knee with subcutaneous, abscess-like lesions of the gluteal region; report of a case with a study of the organism, Mycobacterium abscessus, n. sp.

Authors:  M MOORE; J B FRERICHS
Journal:  J Invest Dermatol       Date:  1953-02       Impact factor: 8.551

2.  Molecular typing of Mycobacterium abscessus based on tandem-repeat polymorphism.

Authors:  Y L Wong; C S Ong; Y F Ngeow
Journal:  J Clin Microbiol       Date:  2012-07-03       Impact factor: 5.948

3.  Proposal that Mycobacterium massiliense and Mycobacterium bolletii be united and reclassified as Mycobacterium abscessus subsp. bolletii comb. nov., designation of Mycobacterium abscessus subsp. abscessus subsp. nov. and emended description of Mycobacterium abscessus.

Authors:  Sylvia Cardoso Leao; Enrico Tortoli; Jean Paul Euzéby; Maria Jesus Garcia
Journal:  Int J Syst Evol Microbiol       Date:  2010-10-29       Impact factor: 2.747

Review 4.  Networks in phylogenetic analysis: new tools for population biology.

Authors:  David A Morrison
Journal:  Int J Parasitol       Date:  2005-04-30       Impact factor: 3.981

5.  A simple and robust statistical test for detecting the presence of recombination.

Authors:  Trevor C Bruen; Hervé Philippe; David Bryant
Journal:  Genetics       Date:  2006-02-19       Impact factor: 4.562

6.  MAFFT: iterative refinement and additional methods.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Methods Mol Biol       Date:  2014

7.  Clinical significance of differentiation of Mycobacterium massiliense from Mycobacterium abscessus.

Authors:  Won-Jung Koh; Kyeongman Jeon; Nam Yong Lee; Bum-Joon Kim; Yoon-Hoh Kook; Seung-Heon Lee; Young Kil Park; Chang Ki Kim; Sung Jae Shin; Gwen A Huitt; Charles L Daley; O Jung Kwon
Journal:  Am J Respir Crit Care Med       Date:  2010-09-10       Impact factor: 21.405

8.  The genome sequence of 'Mycobacterium massiliense' strain CIP 108297 suggests the independent taxonomic status of the Mycobacterium abscessus complex at the subspecies level.

Authors:  Yong-Joon Cho; Hana Yi; Jongsik Chun; Sang-Nae Cho; Charles L Daley; Won-Jung Koh; Sung Jae Shin
Journal:  PLoS One       Date:  2013-11-27       Impact factor: 3.240

Review 9.  Mycobacterium abscessus subsp abscessus lung disease: 'trouble ahead, trouble behind…'.

Authors:  David E Griffith
Journal:  F1000Prime Rep       Date:  2014-11-04

10.  CD-HIT: accelerated for clustering the next-generation sequencing data.

Authors:  Limin Fu; Beifang Niu; Zhengwei Zhu; Sitao Wu; Weizhong Li
Journal:  Bioinformatics       Date:  2012-10-11       Impact factor: 6.937
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  5 in total

1.  The TetR Family Transcription Factor MAB_2299c Regulates the Expression of Two Distinct MmpS-MmpL Efflux Pumps Involved in Cross-Resistance to Clofazimine and Bedaquiline in Mycobacterium abscessus.

Authors:  Ana Victoria Gutiérrez; Matthias Richard; Françoise Roquet-Banères; Albertus Viljoen; Laurent Kremer
Journal:  Antimicrob Agents Chemother       Date:  2019-09-23       Impact factor: 5.191

2.  The resistomes of Mycobacteroides abscessus complex and their possible acquisition from horizontal gene transfer.

Authors:  Shay Lee Chong; Joon Liang Tan; Yun Fong Ngeow
Journal:  BMC Genomics       Date:  2022-10-20       Impact factor: 4.547

3.  Time-to-Detection of Inducible Macrolide Resistance in Mycobacterium abscessus Subspecies and Its Association with the Erm(41) Sequevar.

Authors:  Sara Christianson; William Grierson; Daniel Kein; Andrea D Tyler; Joyce Wolfe; Meenu K Sharma
Journal:  PLoS One       Date:  2016-08-04       Impact factor: 3.240

4.  Mycobacterium abscessus subsp. abscessus Is Capable of Degrading Pseudomonas aeruginosa Quinolone Signals.

Authors:  Franziska S Birmes; Timo Wolf; Thomas A Kohl; Kai Rüger; Franz Bange; Jörn Kalinowski; Susanne Fetzner
Journal:  Front Microbiol       Date:  2017-03-02       Impact factor: 5.640

5.  Genomic Comparisons Reveal Microevolutionary Differences in Mycobacterium abscessus Subspecies.

Authors:  Joon L Tan; Kee P Ng; Chia S Ong; Yun F Ngeow
Journal:  Front Microbiol       Date:  2017-10-23       Impact factor: 5.640
  5 in total

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