| Literature DB >> 26114663 |
Hugh Ramsay1, Jennifer H Barnett2, Jouko Miettunen3, Sari Mukkala4, Pirjo Mäki5, Johanna Liuhanen6, Graham K Murray7, Marjo-Riitta Jarvelin8, Hanna Ollila6, Tiina Paunio9, Juha Veijola10.
Abstract
BACKGROUND: There is limited research regarding the association between genes and cognitive intermediate phenotypes in those at risk for psychotic disorders.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26114663 PMCID: PMC4482687 DOI: 10.1371/journal.pone.0127602
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Loadings of baseline performance for individual tests to three main factors (n = 181).
| Variable | Factor 1: “Verbal performance” | Factor 2: “Psychomotor performance” | Factor 3: “Non-verbal performance” | Uniqueness |
|---|---|---|---|---|
| Vocabulary | 0.61 | -0.39 | 0.28 | 0.41 |
| Matrix reasoning | 0.26 | 0.02 | 0.75 | 0.37 |
| Logical memory | 0.32 | -0.29 | 0.57 | 0.49 |
| Paired Associates Learning | -0.09 | 0.21 | -0.71 | 0.44 |
| Digit span backwards | 0.78 | -0.08 | 0.26 | 0.31 |
| Verbal fluency | 0.46 | -0.51 | 0.24 | 0.47 |
| Stockings of Cambridge | -0.09 | -0.17 | 0.69 | 0.49 |
| Digit span forwards | 0.88 | -0.05 | -0.05 | 0.23 |
| Pegboard dominant | -0.13 | 0.91 | -0.07 | 0.16 |
| Pegboard non-dominant | -0.02 | 0.85 | -0.11 | 0.27 |
Fig 1Scree plot of Eigenvalues for principle component factor analysis of neurocognitive variables.
Association between SNP minor alleles and risk groups for a psychotic disorder, and gender and education.
| Variable | rs6277 C allele | rs1800497 T allele | |||
|---|---|---|---|---|---|
| OR (95% CI) | P-value | OR (95% CI) | P-value | ||
| Risk group (n = 157–158) | Controls | 1.00 | N/A | 1.00 | N/A |
| Familial risk | 0.87 (0.33–2.27) | 0.773 | 0.80 (0.36–1.78) | 0.592 | |
| Clinical risk | 1.25 (0.39–3.97) | 0.710 | 1.02 (0.43–2.41) | 0.972 | |
| Gender (n = 157–158) | Male | 1.00 | N/A | 1.00 | N/A |
| Female | 1.84 (0.78–4.34) | 0.167 | 1.37 (0.67–2.79) | 0.385 | |
| Education (n = 156–157) | Elementary | 1.00 | N/A | 1.00 | N/A |
| High school | 0.54 (0.22–1.34) | 0.183 | 0.80 (0.40–1.60) | 0.529 | |
OR = odds ratio; 95% CI = 95% confidence interval; N/A = not applicable.
^As continuous variable.
#Comparing those with 1–2 T alleles to those without a T allele.
Association between polymorphisms and cognitive outcomes, controlling for gender and education level, in the entire sample of those at risk for psychosis and population controls.
| rs6277 | rs1800497 | |||||
|---|---|---|---|---|---|---|
| Cognitive variable | Beta | Effect size (Cohen’s f2) | P-value | Beta | Effect size (Cohen’s f2) | P-Value |
| Verbal factor performance |
|
|
| -0.102 | N/A | 0.539 |
| Psychomotor factor performance | 0.208 | N/A | 0.064 |
|
|
|
| Non-verbal factor performance | 0.083 | N/A | 0.463 | 0.138 | N/A | 0.417 |
Associations between the rs6277 minor allele and verbal factor performance and rs1800497 minor allele and psychomotor factor performance, according to risk type for psychosis.
| SNP and cognitive factor | Risk group | Beta | Effect size (Cohen’s f2) | P-Value |
|---|---|---|---|---|
| rs6277 and verbal factor performance | Controls | 0.081 | +0.051 | 0.649 |
| Familial risk |
|
|
| |
| Clinical risk |
|
|
| |
| rs1800497 and psychomotor factor performance | Controls | -0.053 | -0.121 | 0.822 |
| Familial risk |
|
|
| |
| Clinical risk | 0.351 | +0.466 | 0.401 |
Mean performance scores according to SNP genotype, unadjusted for gender or education.
| SNP & Risk group | SNP Variant | Group number | Verbal performance | Psychomotor performance | Non-verbal performance |
|---|---|---|---|---|---|
| Mean (SD) | Mean (SD) | Mean (SD) | |||
| rs6277 controls | TT | 18 | 0.34 (0.77) | 0.04 (0.72) | 0.18 (0.80) |
| CT | 34 | -0.20 (1.08) | -0.14 (1.10) | 0.07 (0.93) | |
| CC | 10 | 0.19 (1.08) | 0.02 (1.04) | -0.39 (0.87) | |
| rs6277 familial risk | TT | 19 | 0.35 (1.01) | 0.33 (1.03) | -0.20 (0.96) |
| CT | 27 | -0.40 (0.91) | -0.09 (1.03) | -0.20 (1.03) | |
| CC | 10 | -0.07 (0.96) | -0.08 (0.67) | 0.23 (1.01) | |
| rs6277 clinical risk | TT | 13 | 0.55 (0.96) | 0.22 (0.76) | 0.58 (0.77) |
| CT | 20 | -0.10 (0.92) | 0.24 (1.44) | -0.11 (1.08) | |
| CC | 5 | -0.62 (0.66) | -0.52 (0.68) | 0684 (0.64) | |
| rs1800497 controls | CC | 44 | 0.12 (1.02) | -0.03 (1.02) | 0.03 (0.93) |
| CT | 17 | -0.21 (1.03) | -0.13 (0.93) | -0.07 (0.77) | |
| TT | 2 | 0.03 (0.01) | -0.44 (0.54) | 1.02 (0.07) | |
| rs1800497 familial risk | CC | 41 | -0.05 (1.08) | -0.18 (0.75) | -0.14 (1.06) |
| CT | 13 | -0.26 (0.76) | 0.53 (1.28) | -0.12 (0.88) | |
| TT | 2 | 0.32 (0.54) | 1.69 (0.08) | 0.15 (0.83) | |
| rs1800497 clinical risk | CC | 26 | 0.05 (1.06) | 0.03 (1.11) | 0.17 (1.03) |
| CT | 11 | 0.03 (0.82) | 0.38 (1.36) | 0.32 (0.89) | |
| TT | 1 | 0.49 (N/A) | 0.25 (N/A) | 1.76 (N/A) |