| Literature DB >> 26110972 |
L H McCormick Matthews1, F Noble2, J Tod1, E Jaynes3, S Harris4, J N Primrose2, C Ottensmeier5, G J Thomas6, T J Underwood2.
Abstract
BACKGROUND: Oesophageal adenocarcinoma (OAC) is one of the fastest rising malignancies with continued poor prognosis. Many studies have proposed novel biomarkers but, to date, no immunohistochemical markers of survival after oesophageal resection have entered clinical practice. Here, we systematically review and meta-analyse the published literature, to identify potential biomarkers.Entities:
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Year: 2015 PMID: 26110972 PMCID: PMC4647536 DOI: 10.1038/bjc.2015.179
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
Figure 1PRISMA flow chart illustrating stages of selection of final articles for meta-analysis.
Inclusion criteria adapted from REMARK criteria, utilised at eligibility stage of selection
| Prospective or retrospective cohort design with a well-defined study population with justification for excluded cases | |
| Assay of primary/neoadjuvant resected OAC tumour specimens | |
| Clear description of methods for tissue handling and IHC, including antigen retrieval, selection, and preparation of both primary and secondary antibodies, as well as visualisation techniques | |
| A clear statement on the choice of positive and negative controls and on the outcome of the assay to ensure that the primary antibody used was a well-validated reagent | |
| Statistical analysis using univariate or multivariate hazards modelling | |
| Reporting of the resulting HRs including 95% CIs and |
Abbreviations: CI=confidence interval; IHC=immunohistochemical; HR=hazard ratio; OAC=oesophageal adenocarcinoma; REMARK=REporting recommendations for tumor MARKer.
Figure 2Funnel plot showing publication bias for the 58 included studies providing HR and CI. Plotted points are frequently seen away from the ‘0'.
Extracted data from biomarker articles
| Caspase-3 | 35 | NA | Cell signalling Bioline (1 : 100) | Labelling index | Univariate | DFS | <0.01 | 0.298–3.302 | 0.990 | |
| E2f-1 | 35 | 23 (66%) | Santa Cruz (1 : 100) | >35% cells labelling index | Univariate | DFS | 3.908 | 0.153–0.992 | 0.048 | |
| p53 | 38 | 24 (52%) | Sigma Biosciences (1 : 100) | >10% | Multivariate | CSS | 1.429 | 0.429–4.725 | 0.514 | |
| p53 | 88 | 40 (45%) | Novocastra (NA) | >50% | Univariate | OS | 1.46 | 0.87–2.46 | 0.155 | |
| p53 | 142 | 48 (34%) | Dako (1 : 50) | +2 to +8 | Univariate | OS | 1.64 | 1.1–2.45 | 0.014 | |
| EGFR | 137 | 72 (53%) | Cytomed (1 : 60) | >10% cells +ve. | Univariate | OS | 0.99 | 0.98–1.00 | 0.039 | |
| EGFR | 359 | 36 (10%) | Novocastra (1 : 10) | +2, +3 | Univariate | OS | 1.520 | 1.03–2.26 | 0.040 | |
| EGFR | 663 | NA | Novocastra (1 : 10) | +1 | Univariate | OS | 0.83 | 0.66–1.04 | .10 | |
| 100 (15%) | +2 | 1.41 | .05–1.91 | 0.02 | ||||||
| +3 | 0.94 | 0.58–1.52 | 0.80 | |||||||
| EGFR | 103 | 33 (32%) | Dako (NA) | >5% | Univariate | OS | 1.93 | 1.24–3.02 | 0.004 | |
| HER2 | 62 | 15 (19%) | Boehringer Mannheim Biochemica (NA) | +2 | Univariate | OS | 4.100 | 1.4–11.8 | 0.015 | |
| HER2 | 708 | 119 (17%) | Herceptest (NA) | +2, +3 | Univariate | OS | 0.760 | 0.59–0.96 | 0.024 | |
| HER2 | 135 | 31 (23%) | Ventana (NA) | +2, +3 | Multivariate | OS | 0.840 | 0.53–1.33 | 0.470 | |
| Ki67 | 98 | NA | Dako (1 : 50) | Slidepath scoring algorithm. Tertiles. | Univariate | CSS | 1.460 | 1.01–2.12 | 0.048 | |
| Ki67 | 35 | NA | Dako (1 : 100) | <35% cells +ve, labelling index | Univariate | DFS | 3.757 | 0.986–11.68 | 0.050 | |
| Ki67 | 59 | 50 (85%) | Dako (1 : 1000) | 0–10% | Univariate | CSS | 3.900 | 1.7–9.1 | <0.001 | |
| MET | 145 | 78 (54%) | Zymed (1 : 100) | +2, +3 | Univariate | DFS | 2.300 | 1.3–4.1 | 0.004 | |
| p-mTOR | 147 | 29 (19.7%) | Cell Signalling Technology (1 : 50) | 2+, 3+ | Univariate | CSS | 1.648 | 1.019–2.664 | 0.042 | |
| PAPSS2 | 337 | 216 (64%) | Abcam (1 : 600) | +2, +3 | Univariate | OS | 1.240 | 0.96–1.61 | 0.100 | |
| pSTAT3 | 179 | 72 (40%) | Cell Signalling Technology (1 : 100) | >10 (>median) | Univariate | OS | 1.982 | 1.186–3.311 | 0.050 | |
| PTEN | 117 | 101 (86%) | Cell Signalling Technology (1 : 50) | >75% | Multivariate | OS | 0.451 | 0.233–0.873 | 0.018 | |
| B7-H1 | 101 | 74 (73%) | Abcam (NA) | >+4 (Intensity+proportion of cells) | Univariate | OS | 2.92 | 1.50–5.66 | <0.001 | |
| CD3 | 99 | 57 (58%) | NeoMarkers (1 : 100) | >2.0 Labelling indices | Univariate | OS | 0.49 | 0.28–0.85 | 0.012 | |
| CD3 central | 105 | NA | Dako (1 : 50) | >563 (>median count) | Univariate | OS | 0.53 | 0.33–0.84 | 0.008 | |
| CD4 central | 105 | 58 (55%) | NeoMarkers (1 : 40) | >30 (>median count) | Univariate | OS | 0.74 | 0.47–1.16 | 0.187 | |
| CD25 central | 105 | NA | NeoMarkers (1 : 10) | >33 (>median count) | Univariate | OS | 0.76 | 0.48–1.22 | 0.262 | |
| CD8 central | 105 | 51 (49%) | Dako (1 : 50) | >225 (>median count) | Univariate | OS | 0.44 | 0.27–0.69 | <0.001 | |
| CD8 tertiles | 98 | NA | Dako (1 : 100) | Slidepath scoring algorithm | Univariate | CSS | 0.69 | 0.48–0.99 | 0.048 | |
| CD45RO | 110 | 93 (85%) | Dako (1 : 1200) | >0.9 Labelling indices | Univariate | DFS | 0.44 | 0.23–0.84 | 0.013 | |
| CD68 | 98 | NA | Dako (1 : 200) | Slidepath scoring algorithm. Tertiles. | Univariate | CSS | 1.38 | 0.99–1.94 | 0.061 | |
| FoxP3 central | 105 | 46 (43%) | eBioscience (1 : 50) | >117 (>median count) | Univariate | OS | 0.65 | 0.40–1.05 | 0.079 | |
| CAIX | 182 | 85 (47%) | Abcam (1 : 1000) | >median score (20 out of score 0–300) | Univariate | OS | 1.844 | 1.11–3.08 | 0.007 | |
| ANXA1 | 104 | 41 (39%) | BD Biosciences (1 : 100) | >25% | Univariate | OS | 1.930 | 1.25–2.99 | 0.003 | |
| COX-2 | 90 | NA | Cayman Chemical (1 : 100) | >200 | Univariate | CSS | 3.530 | 2.11–5.89 | <0.001 | |
| COX-2 | 145 | 115 (79%) | Cayman Chemical (1 : 200) | +2, +3 | Univariate | OS | 3.200 | 1.5–7.1 | 0.002 | |
| COX-2 | 147 | 39 (27%) | Cayman Chemical (1 : 100) | +3 | Univariate | OS | 1.700 | 1.07–2.69 | 0.023 | |
| COX-2 | 145 | 78 (54%) | Cayman Chemical (1 : 200) | +2, +3 | Univariate | DFS | 1.400 | 0.8–2.6 | 0.234 | |
| DCK | 355 | 126 (36%) | Lifespan Biosciences (1 : 10) | +2, +3 | Univariate | OS | 0.980 | 0.75–1.28 | 0.860 | |
| GSTπ | 15 | 6 (40%) | Vector laboratories | 3+ | Univariate | DFS | 2.250 | 0.71–7.17 | 0.350 | |
| MTMR9 | 356 | 88 (25%) | Novus (1 : 350) | +2, +3 | Univariate | OS | 1.140 | 0.87–1.51 | 0.340 | |
| NEIL2 | 357 | 198 (55%) | Sigma-Aldrich (1 : 50) | +2, +3 | Univariate | OS | 1.120 | 0.87–1.43 | 0.390 | |
| SIRT2 | 359 | 156 (44%) | Atlas Antibodies (1 : 100) | +2, +3 | Univariate | OS | 1.310 | 1.03–1.67 | 0.030 | |
| SIRT2 | 663 | NA | Atlas Antibodies (1 : 100) | 2 | Univariate | OS | 1.69 | 1.10–2.60 | 0.02 | |
| 290 (44) | 1 | 1.81 | 1.24–2.64 | <0.01 | ||||||
| 0 | 1.37 | 0.96–1.97 | 0.08 | |||||||
| WT1 | 358 | 19 (5%) | Dako (1 : 800) | +2, +3 | Univariate | OS | 0.710 | 0.39–1.30 | 0.270 | |
| CD34 | 98 | NA | Dako (1 : 150) | Slidepath scoring algorithm. Tertiles. | Univariate | CSS | 0.94 | 0.67–1.34 | 0.736 | |
| VEGF | 38 | 22 (48%) | Santa Cruz (1 : 400) | >30% cells stained | Multivariate | CSS | 0.369 | 0.095–1.436 | 0.115 | |
| VEGF | 143 | 90 (63%) | R&D systems (1 : 50) | >+1 | Univariate | CSS | 1.900 | 1.22–2.96 | 0.005 | |
| VEGF-C | 128 | 96 (75%) | Santa Cruz (1 : 50) | >0.18 Mean optical density | Multivariate | DFS | 3.491 | 2.156–5.652 | <0.0001 | |
| AXL | 92 | 56 (61%) | R&D systems (1 : 100) | +3 | Multivariate | OS | 1.91 | 1.04–3.49 | 0.036 | |
| E-cadherin | 59 | 44 (75%) | Dako (1 : 100) | Absent/reduced | Univariate | CSS | 3.900 | 1.2–12.9 | 0.017 | |
| LgR5 | 24 | NA | MBL Internation Co (1 : 50) | >5 (Intensity+proportion) | Univariate | OS | 2.860 | 1.08–7.61 | 0.040 | |
| LgR5 | 60 | 51 (85%) | Abcam (NA) | >15% | Univariate | OS | 2.418 | 1.17–4.99 | 0.033 | |
| MMP-1 | 60 | 33 (55%) | Hiddenhausen (NA) | >46% | Univariate | OS | 1.453 | 0.7101–2.9718 | 0.307 | |
| Mucin 16 | 95 | 66 (70%) | Abcam (1 : 200) | Moderate/Diffuse | Univariate | NA | 1.410 | 0.734–2.709 | 0.303 | |
| p120 | 96 | 65 (67%) | Transduction laboratories (1 : 1000) | <90% | Multiivariate | OS | 2.100 | 1.1–4.2 | 0.006 | |
| Podoplanin (lymphovascular invasion) | 194 | 81 (42%) | Ventana (NA) | Tumour cluster in podoplanin decorated space | Univariate | OS | 1.863 | 1.086–0.195 | <0.01 | |
| Podoplanin (CAFs) | 200 | 118 (59%) | Venatana (1 : 300) | >10% CAFs | Univariate | OS | 1.843 | 1.097–3.096 | 0.001 | |
| RKIP | 179 | NA | Upstage/Millipore (1 : 1000) | >80 out of score 0–300 (>median score) | Multivariate | DFS | 0.494 | 0.278–0.878 | 0.016 | |
| TRIMM44 | 349 | 197 (56%) | Protein Tech group (1 : 50) | +2, +3 | Univariate | OS | 1.310 | 1.01–1.70 | 0.040 | |
| TRIMM44 | 655 | NA | Protein Tech group (1 : 50) | +1 | Univariate | OS | 1.46 | 0.89–2.44 | 0.4 | |
| 442 (67%) | +2 | 1.59 | 0.96–2.63 | 0.07 | ||||||
| +3 | 1.94 | 1.09–3.44 | 0.02 | |||||||
| uPAR (Cancer cells) | 60 | 37 (62%) | Raised in-house | +2, +3, +4 | Univariate | OS | 2.020 | 1.11–3.66 | 0.021 | |
| uPAR (Macrophages) | 60 | 57 (95%) | Raised in-house | +2, +3, +4 | Univariate | OS | 1.120 | 0.62–2.01 | 0.710 | |
| uPAR (myofibroblasts) | 60 | 39 (65%) | Raised in-house | +2, +3, +4 | Univariate | OS | 1.600 | 0.86–2.99 | 0.140 | |
Abbreviations: CI=confidence interval; CSS=cancer-specific survival; DFS=disease-free survival; IHC=immunohistochemical; HR=hazard ratio; OS=overall survival.
Values as documented in original articles. Incorrect values excluded from meta-analysis.
Validation cohorts from same study not used in meta-analysis due to differences in cut-offs.
Figure 3Statistically significant prognostic biomarkers from at least one study in resected oesophageal adenocarcinoma covering all hallmarks of cancer.
Figure 4Forest plots with associated hazard ratio (HR) and 95% confidence interval. Weights calculated using a random effects model. HR>1 implies worse survival with overexpression, HR<1; improved survival (vertical black line indicates HR of 1; red vertical dotted line indicates overall HR). A full colour version of this figure is available at the British Journal of Cancer journal online.