| Literature DB >> 26107386 |
James M Beerens1, Erik G Noonburg2, Dale E Gawlik2.
Abstract
Species distribution models (SDM) link species occurrence with a suite of environmental predictors and provide an estimate of habitat quality when the variable set captures the biological requirements of the species. SDMs are inherently more complex when they include components of a species' ecology such as conspecific attraction and behavioral flexibility to exploit resources that vary across time and space. Wading birds are highly mobile, demonstrate flexible habitat selection, and respond quickly to changes in habitat quality; thus serving as important indicator species for wetland systems. We developed a spatio-temporal, multi-SDM framework using Great Egret (Ardea alba), White Ibis (Eudocimus albus), and Wood Stork (Mycteria Americana) distributions over a decadal gradient of environmental conditions to predict species-specific abundance across space and locations used on the landscape over time. In models of temporal dynamics, species demonstrated conditional preferences for resources based on resource levels linked to differing temporal scales. Wading bird abundance was highest when prey production from optimal periods of inundation was concentrated in shallow depths. Similar responses were observed in models predicting locations used over time, accounting for spatial autocorrelation. Species clustered in response to differing habitat conditions, indicating that social attraction can co-vary with foraging strategy, water-level changes, and habitat quality. This modeling framework can be applied to evaluate the multi-annual resource pulses occurring in real-time, climate change scenarios, or restorative hydrological regimes by tracking changing seasonal and annual distribution and abundance of high quality foraging patches.Entities:
Mesh:
Year: 2015 PMID: 26107386 PMCID: PMC4480858 DOI: 10.1371/journal.pone.0128182
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1South Florida study system displaying Everglades hydrological basins (regions) and Systematic Reconnaissance Flight (SRF) survey extent.
The regions of coverage include Water Conservation Areas (WCA) 1, 2A, 2B, 3A, 3B, Big Cypress National Park (BCNP), and Everglades National Park (ENP). South Florida Water Management District (SFWMD) canals are displayed for reference.
Ranking of candidate models describing variables influencing daily mean depth use of Great Egrets, White Ibises, and Wood Storks in the Florida Everglades (Proc Mixed).
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| 7 | 1588.7 |
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| Depth, Depth SD, Depth2, Recess, DSD, DSD2 | 9 | 1589.0 | 20 | 0.23 | 0.19 | |
| Depth, Depth2, Recess, Depth*Recess | 7 | 1589.9 | 23 | 1.15 | 0.12 | |
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| Depth, Depth SD, Recess, Recess*DSD | 7 | 1473.3 | 21 | 0.71 | 0.21 | |
| Depth, Depth2, Recess, Recess*DSD | 7 | 1475.0 | 14 | 2.43 | 0.09 | |
| Depth, Depth SD, Recess, Recess*DSD, Cells | 8 | 1475.3 | 26 | 2.78 | 0.07 | |
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| Depth, Depth2, Recess, DSD SD, Depth*DSD | 7 | 1229.6 | 21 | 0.43 | 0.15 | |
| Depth, Depth2, Recess2, DSD SD, Depth*DSD | 7 | 1229.8 | 22 | 0.67 | 0.13 | |
| Depth, Depth2, DSD SD, Depth*DSD, Recess*DSD | 7 | 1230.3 | 16 | 1.16 | 0.10 | |
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Models are ranked by differences in Akaike’s information criterion and only candidate models within ΔAICc d ≤ 4.0 are presented. Model selection results are followed by model averaging results for each species. The R2 represents the model fit for the estimated mean daily depth use vs. model averaged predicted values.
Ranking of candidate models describing variables influencing daily mean 2-week recession rate use of Great Egrets, White Ibises, and Wood Storks in the Florida Everglades (Proc Mixed).
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| Recess, Recess SD, Recess2, Depth SD, Depth*Recess, Recess*DSD | 8 | -335.5 | 9 | 2.23 | 0.14 | |
| Recess, Recess SD, Recess, Depth, Depth SD, Depth*Recess, Cells | 9 | -334.9 | 8 | 2.85 | 0.11 | |
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| Recess, Recess SD, Recess2, Depth*Recess | 6 | -281.1 | 8 | 0.46 | 0.27 | |
| Recess, Recess SD, Recess2, Depth SD, DSD, Depth*DSD, Depth*Recess, Depth*DSD | 9 | -279.5 | 26 | 2.01 | 0.13 | |
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| Recess, Recess SD, Recess2, Depth SD, Depth*Recess, Recess*DSD | 8 | -46.5 | 26 | 0.41 | 0.27 | |
| Recess, Recess SD, Depth SD, Depth*Recess, Recess*DSD | 7 | -45.0 | 9 | 1.83 | 0.13 | |
| Recess, Recess SD, Depth*Recess | 5 | -45.0 | 23 | 1.91 | 0.13 | |
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Models are ranked by differences in Akaike’s information criterion and only candidate models within ΔAICc d ≤ 4.0 are presented. Model selection results are followed by model averaging results for each species. The R2 represents the model fit for the estimated mean daily recession rate use vs. model averaged predicted values.
Ranking of candidate models describing variables influencing daily mean days since drydown (DSD) use of Great Egrets, White Ibises, and Wood Storks in the Florida Everglades (Proc Mixed).
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| Depth, Depth SD, Depth2, DSD, DSD SD, DSD, 2Depth Use*Depth, Depth*DSD, Depth*Recess, Recess*DSD | 12 | 2680.7 | 12 | 4.08 | 0.11 | |
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| Depth, Depth2, DSD, DSD SD, Depth Use*Depth, Depth*DSD, Cells | 9 | 2609.6 | 15 | 0.51 | 0.40 | |
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| Depth, Depth2, DSD, DSD SD, Depth Use*Depth, Depth*Recess | 8 | 2150.5 | 9 | 1.45 | 0.21 | |
| Depth, Depth2, DSD, DSD SD, Depth Use*Depth, Depth*DSD | 8 | 2150.7 | 15 | 1.64 | 0.19 | |
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Models are ranked by differences in Akaike’s information criterion and only candidate models within ΔAICc d ≤ 4.0 are presented. Model selection results are followed by model averaging results for each species. The R2 represents the model fit for the estimated mean daily DSD use vs. model averaged predicted values.
Ranking of candidate models describing variables influencing daily mean flock abundance of Great Egrets, White Ibises, and Wood Storks in the Florida Everglades (Proc Mixed).
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| Depth SD, Depth2, DSD SD, Reversal, Depth*DSD, Depth Use*Depth | 8 | 628.45 | 9 | 0.16 | 0.38 | |
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| Depth, Depth SD, DSD, DSD SD, DSD2, Depth*DSD | 8 | 560.7 | 17 | 2.01 | 0.26 | |
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| 12 | 0.003 | 0.00 | 1.00 | ||
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| 14 | -0.000 | 0.00 | 0.95 | ||
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| Depth A, Depth, Depth SD, Depth2, Recess2, Reversal, DSD2, Depth Use*Depth | 10 | -209.4 | 14 | 2.45 | 0.23 | |
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Models are ranked by differences in Akaike’s information criterion and only candidate models within ΔAICc d ≤ 4.0 are presented. Model selection results are followed by model averaging results for each species. The R2 represents the model fit for the estimated daily flock abundance vs. model averaged predicted values.
Ranking of candidate models describing variables influencing daily individual abundance of Great Egrets, White Ibises, and Wood Storks in the Florida Everglades (Proc Mixed).
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| Depth A, Depth SD, Depth2, Recess2, DSD SD, Reversal, Depth Use*Depth | 9 | 797.6 | 2 | 0.08 | 0.42 | |
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| Depth SD, Depth2, Recess SD, DSD, Reversal, DSD Use*DSD | 8 | 891.3 | 11 | 2.98 | 0.17 | |
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| 11 | 1.590 | 0.63 | 1.00 | ||
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| 9 | -0.003 | 0.00 | 1.00 | ||
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| 9 | -0.167 | 0.08 | 0.87 | ||
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| 10 | 0.000 | 0.00 | 0.76 | ||
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| 9 | 0.007 | 0.00 | 0.76 | ||
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| Depth A, Depth, Depth SD, Depth2, Recess, Recess SD, Recess2, DSD SD, Reversal, Depth Use*Depth | 12 | 484.9 | 6 | 3.72 | 0.12 | |
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Models are ranked by differences in Akaike’s information criterion and only candidate models within ΔAICc d ≤ 4.0 are presented. Model selection results are followed by model averaging results for each species. The R2 represents the model fit for the estimated daily individual abundance vs. model averaged predicted values.
Fig 2Daily mean landscape flocks and individuals (fourth-root transformed) predicted by the model-averaged terms for the Great Egret.
Predicted presence and abundance are highest with an average landscape depth (within available depths) of 15–22 cm and when Great Egrets are using an average DSD of ~500 days.
Fig 3Daily mean landscape flocks and individuals (fourth-root transformed) predicted by the model-averaged terms for the White Ibis.
Predicted presence and abundance are highest with an average landscape depth (within available depths) of 10–17 cm and when White Ibis are using an average DSD of ~450 days.
Fig 4Daily mean landscape flocks and individuals (fourth-root transformed) predicted by the model-averaged terms for the Wood Stork.
Predicted presence and abundance are highest with an average landscape depth (within available depths) less than 15 cm and when Wood Storks are using an average recession rate of ~0.5 cm/day.
Ranking of candidate models describing variables influencing frequency of cell use (i.e., spatial occurrence) over the study period for the Great Egret, White Ibis, and Wood Stork (Proc Glimmix).
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| Depth, Depth2, DSD, DSD2, Reversal, HP, Depth*DSD, Depth*Recess, Recess*DSD | 14 | 883.83 | 18 | 3.24 | 0.15 | |
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| 8 | 750.9 | 6 | 0.67 | 0.39 | |
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| 14 | -485.1 | 18 | 0.72 | 0.34 | |
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Models are ranked by differences in Akaike’s information criterion and only candidate models within ΔAICc d ≤ 4.0 are presented. Model selection results are followed by model averaging results for each species. The R2 represents the model fit for the estimated spatial occurrence vs. model averaged predicted values.
Fig 5Map displaying XY parameter estimates accounting for residual spatial correlation of Great Egret frequency of use.
Locations in red are frequented more often across time after accounting for hydrological predictors. South Florida Water Management District (SFWMD) canals are displayed for reference.