Literature DB >> 26098227

Symmetry and scale orient Min protein patterns in shaped bacterial sculptures.

Fabai Wu1, Bas G C van Schie1, Juan E Keymer1, Cees Dekker1.   

Abstract

The boundary of a cell defines the shape and scale of its subcellular organization. However, the effects of the cell's spatial boundaries as well as the geometry sensing and scale adaptation of intracellular molecular networks remain largely unexplored. Here, we show that living bacterial cells can be 'sculpted' into defined shapes, such as squares and rectangles, which are used to explore the spatial adaptation of Min proteins that oscillate pole-to-pole in rod-shaped Escherichia coli to assist cell division. In a wide geometric parameter space, ranging from 2 × 1 × 1 to 11 × 6 × 1 μm(3), Min proteins exhibit versatile oscillation patterns, sustaining rotational, longitudinal, diagonal, stripe and even transversal modes. These patterns are found to directly capture the symmetry and scale of the cell boundary, and the Min concentration gradients scale with the cell size within a characteristic length range of 3-6 μm. Numerical simulations reveal that local microscopic Turing kinetics of Min proteins can yield global symmetry selection, gradient scaling and an adaptive range, when and only when facilitated by the three-dimensional confinement of the cell boundary. These findings cannot be explained by previous geometry-sensing models based on the longest distance, membrane area or curvature, and reveal that spatial boundaries can facilitate simple molecular interactions to result in far more versatile functions than previously understood.

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Year:  2015        PMID: 26098227      PMCID: PMC4966624          DOI: 10.1038/nnano.2015.126

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  46 in total

1.  Topological regulation of cell division in E. coli. spatiotemporal oscillation of MinD requires stimulation of its ATPase by MinE and phospholipid.

Authors:  Z Hu; J Lutkenhaus
Journal:  Mol Cell       Date:  2001-06       Impact factor: 17.970

2.  F-actin assembly in Dictyostelium cell locomotion and shape oscillations propagates as a self-organized reaction-diffusion wave.

Authors:  Michael G Vicker
Journal:  FEBS Lett       Date:  2002-01-02       Impact factor: 4.124

3.  Exploring intracellular space: function of the Min system in round-shaped Escherichia coli.

Authors:  Brian D Corbin; Xuan-Chuan Yu; William Margolin
Journal:  EMBO J       Date:  2002-04-15       Impact factor: 11.598

4.  Intra- and intercellular fluctuations in Min-protein dynamics decrease with cell length.

Authors:  Elisabeth Fischer-Friedrich; Giovanni Meacci; Joe Lutkenhaus; Hugues Chaté; Karsten Kruse
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

5.  Bacterial cell curvature through mechanical control of cell growth.

Authors:  Matthew T Cabeen; Godefroid Charbon; Waldemar Vollmer; Petra Born; Nora Ausmees; Douglas B Weibel; Christine Jacobs-Wagner
Journal:  EMBO J       Date:  2009-03-12       Impact factor: 11.598

6.  Scaling of morphogen gradients by an expansion-repression integral feedback control.

Authors:  Danny Ben-Zvi; Naama Barkai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-30       Impact factor: 11.205

7.  Growth in width and FtsZ ring longitudinal positioning in a gammaproteobacterial symbiont.

Authors:  Nikolaus Leisch; Jolanda Verheul; Niels R Heindl; Harald R Gruber-Vodicka; Nika Pende; Tanneke den Blaauwen; Silvia Bulgheresi
Journal:  Curr Biol       Date:  2012-10-09       Impact factor: 10.834

8.  Highly canalized MinD transfer and MinE sequestration explain the origin of robust MinCDE-protein dynamics.

Authors:  Jacob Halatek; Erwin Frey
Journal:  Cell Rep       Date:  2012-06-07       Impact factor: 9.423

9.  Oscillations of Min-proteins in micropatterned environments: a three-dimensional particle-based stochastic simulation approach.

Authors:  Max Hoffmann; Ulrich S Schwarz
Journal:  Soft Matter       Date:  2014-04-14       Impact factor: 3.679

10.  Noise-induced Min phenotypes in E. coli.

Authors:  David Fange; Johan Elf
Journal:  PLoS Comput Biol       Date:  2006-05-18       Impact factor: 4.475

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  32 in total

1.  Division plane placement in pleomorphic archaea is dynamically coupled to cell shape.

Authors:  James C Walsh; Christopher N Angstmann; Alexandre W Bisson-Filho; Ethan C Garner; Iain G Duggin; Paul M G Curmi
Journal:  Mol Microbiol       Date:  2019-06-11       Impact factor: 3.501

2.  Active Transport of Membrane Components by Self-Organization of the Min Proteins.

Authors:  Yu-Ling Shih; Ling-Ting Huang; Yu-Ming Tu; Bo-Fan Lee; Yu-Chiuan Bau; Chia Yee Hong; Hsiao-Lin Lee; Yan-Ping Shih; Min-Feng Hsu; Zheng-Xin Lu; Jui-Szu Chen; Ling Chao
Journal:  Biophys J       Date:  2019-03-23       Impact factor: 4.033

3.  Applications of smartphone-based near-infrared (NIR) imaging, measurement, and spectroscopy technologies to point-of-care (POC) diagnostics.

Authors:  Wenjing Huang; Shenglin Luo; Dong Yang; Sheng Zhang
Journal:  J Zhejiang Univ Sci B       Date:  2021-03-15       Impact factor: 3.066

4.  How biologists are creating life-like cells from scratch.

Authors:  Kendall Powell
Journal:  Nature       Date:  2018-11       Impact factor: 49.962

5.  Cell Boundary Confinement Sets the Size and Position of the E. coli Chromosome.

Authors:  Fabai Wu; Pinaki Swain; Louis Kuijpers; Xuan Zheng; Kevin Felter; Margot Guurink; Jacopo Solari; Suckjoon Jun; Thomas S Shimizu; Debasish Chaudhuri; Bela Mulder; Cees Dekker
Journal:  Curr Biol       Date:  2019-05-30       Impact factor: 10.834

6.  The nanotechnology of life-inspired systems.

Authors:  Bartosz A Grzybowski; Wilhelm T S Huck
Journal:  Nat Nanotechnol       Date:  2016-07-06       Impact factor: 39.213

Review 7.  Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review.

Authors:  Suckjoon Jun; Fangwei Si; Rami Pugatch; Matthew Scott
Journal:  Rep Prog Phys       Date:  2018-01-09

8.  Reverse and forward engineering of protein pattern formation.

Authors:  Simon Kretschmer; Leon Harrington; Petra Schwille
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

Review 9.  The Min-protein oscillations in Escherichia coli: an example of self-organized cellular protein waves.

Authors:  Lukas Wettmann; Karsten Kruse
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

10.  Mapping out Min protein patterns in fully confined fluidic chambers.

Authors:  Yaron Caspi; Cees Dekker
Journal:  Elife       Date:  2016-11-25       Impact factor: 8.140

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