Literature DB >> 26093179

3D reconstruction of two-dimensional crystals.

Henning Stahlberg1, Nikhil Biyani1, Andreas Engel2.   

Abstract

Electron crystallography of two-dimensional (2D) crystals determines the structure of membrane proteins in the lipid bilayer by imaging with cryo-electron microscopy and image processing. Membrane proteins can be packed in regular 2D arrays by their reconstitution in the presence of lipids at low lipid to protein weight-to-weight ratio. The crystal quality depends on the protein purity and homogeneity, its stability, and on the crystallization conditions. A 2D crystal presents the membrane protein in a functional and fully lipidated state. Electron crystallography determines the 3D structure even of small membrane proteins up to atomic resolution, but 3D density maps have a better resolution in the membrane plane than in the vertical direction. This problem can be partly eliminated by applying an iterative algorithm that exploits additional known constraints about the 2D crystal. 2D electron crystallography is particularly attractive for the structural analysis of membrane proteins that are too small for single particle analyses and too unstable to form 3D crystals. With the recent introduction of direct electron detector cameras, the routine determination of the atomic 3D structure of membrane-embedded membrane proteins is in reach.
Copyright © 2015. Published by Elsevier Inc.

Entities:  

Keywords:  2D crystallization; 3D reconstruction; Electron crystallography; Lipid; Membrane protein; Missing cone

Mesh:

Substances:

Year:  2015        PMID: 26093179     DOI: 10.1016/j.abb.2015.06.006

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  9 in total

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6.  Protein structure determination by electron diffraction using a single three-dimensional nanocrystal.

Authors:  M T B Clabbers; E van Genderen; W Wan; E L Wiegers; T Gruene; J P Abrahams
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Authors:  Markus Zweckstetter; Jesús R Requena; Holger Wille
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8.  Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.

Authors:  Ricardo D Righetto; Nikhil Biyani; Julia Kowal; Mohamed Chami; Henning Stahlberg
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