Literature DB >> 26090522

Robust Atlas-Based Segmentation of Highly Variable Anatomy: Left Atrium Segmentation.

Michal Depa1, Mert R Sabuncu2, Godtfred Holmvang3, Reza Nezafat4, Ehud J Schmidt5, Polina Golland.   

Abstract

Automatic segmentation of the heart's left atrium offers great benefits for planning and outcome evaluation of atrial ablation procedures. However, the high anatomical variability of the left atrium presents significant challenges for atlas-guided segmentation. In this paper, we demonstrate an automatic method for left atrium segmentation using weighted voting label fusion and a variant of the demons registration algorithm adapted to handle images with different intensity distributions. We achieve accurate automatic segmentation that is robust to the high anatomical variations in the shape of the left atrium in a clinical dataset of MRA images.

Entities:  

Keywords:  Atlas-based segmentation; cardiac segmentation; label fusion; left atrium segmentation; non-rigid registration

Year:  2010        PMID: 26090522      PMCID: PMC4469076          DOI: 10.1007/978-3-642-15835-3_9

Source DB:  PubMed          Journal:  Stat Atlases Comput Models Heart


  17 in total

1.  Three-dimensional multimodal brain warping using the demons algorithm and adaptive intensity corrections.

Authors:  A Guimond; A Roche; N Ayache; J Meunier
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains.

Authors:  Torsten Rohlfing; Robert Brandt; Randolf Menzel; Calvin R Maurer
Journal:  Neuroimage       Date:  2004-04       Impact factor: 6.556

3.  A comprehensive shape model of the heart.

Authors:  Cristian Lorenz; Jens von Berg
Journal:  Med Image Anal       Date:  2006-05-18       Impact factor: 8.545

4.  A log-Euclidean framework for statistics on diffeomorphisms.

Authors:  Vincent Arsigny; Olivier Commowick; Xavier Pennec; Nicholas Ayache
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

5.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

6.  Four-chamber heart modeling and automatic segmentation for 3-D cardiac CT volumes using marginal space learning and steerable features.

Authors:  Yefeng Zheng; Adrian Barbu; Bogdan Georgescu; Michael Scheuering; Dorin Comaniciu
Journal:  IEEE Trans Med Imaging       Date:  2008-11       Impact factor: 10.048

7.  Image matching as a diffusion process: an analogy with Maxwell's demons.

Authors:  J P Thirion
Journal:  Med Image Anal       Date:  1998-09       Impact factor: 8.545

8.  Multi-modal volume registration by maximization of mutual information.

Authors:  W M Wells; P Viola; H Atsumi; S Nakajima; R Kikinis
Journal:  Med Image Anal       Date:  1996-03       Impact factor: 8.545

9.  Risk of stroke in non-rheumatic atrial fibrillation.

Authors:  K M Flegel; M J Shipley; G Rose
Journal:  Lancet       Date:  1987-03-07       Impact factor: 79.321

10.  Automatic anatomical brain MRI segmentation combining label propagation and decision fusion.

Authors:  Rolf A Heckemann; Joseph V Hajnal; Paul Aljabar; Daniel Rueckert; Alexander Hammers
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

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  18 in total

1.  Contour-Driven Atlas-Based Segmentation.

Authors:  Christian Wachinger; Karl Fritscher; Greg Sharp; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2015-06-09       Impact factor: 10.048

2.  Automatic segmentation of the left atrium from MRI images using salient feature and contour evolution.

Authors:  Liangjia Zhu; Yi Gao; Anthony Yezzi; Rob MacLeod; Joshua Cates; Allen Tannenbaum
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2012

3.  How Many Templates Does It Take for a Good Segmentation?: Error Analysis in Multiatlas Segmentation as a Function of Database Size.

Authors:  Suyash P Awate; Peihong Zhu; Ross T Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

4.  Automatic segmentation of the left atrium from MR images via variational region growing with a moments-based shape prior.

Authors:  Liangjia Zhu; Yi Gao; Anthony Yezzi; Allen Tannenbaum
Journal:  IEEE Trans Image Process       Date:  2013-09-16       Impact factor: 10.856

5.  Characterizing spatially varying performance to improve multi-atlas multi-label segmentation.

Authors:  Andrew J Asman; Bennett A Landman
Journal:  Inf Process Med Imaging       Date:  2011

6.  Computer Vision Techniques for Transcatheter Intervention.

Authors:  Feng Zhao; Xianghua Xie; Matthew Roach
Journal:  IEEE J Transl Eng Health Med       Date:  2015-06-18       Impact factor: 3.316

7.  Multiatlas segmentation as nonparametric regression.

Authors:  Suyash P Awate; Ross T Whitaker
Journal:  IEEE Trans Med Imaging       Date:  2014-04-30       Impact factor: 10.048

8.  Automatic classification of scar tissue in late gadolinium enhancement cardiac MRI for the assessment of left-atrial wall injury after radiofrequency ablation.

Authors:  Daniel Perry; Alan Morris; Nathan Burgon; Christopher McGann; Robert Macleod; Joshua Cates
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-02-23

9.  Spectral label fusion.

Authors:  Christian Wachinger; Polina Golland
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

10.  Hierarchical performance estimation in the statistical label fusion framework.

Authors:  Andrew J Asman; Bennett A Landman
Journal:  Med Image Anal       Date:  2014-07-04       Impact factor: 8.545

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