| Literature DB >> 26090175 |
Sara Maira M Hizam1, Bohari M Yamin1.
Abstract
The title salt, C5H11N2S(+)·C7H4ClO2 (-), comprises a 2-amino-3-ethyl-4,5-di-hydro-1,3-thia-zol-3-ium cation in which the five-membered ring adopts an envelope conformation with the methyl-ene C adjacent to the S atom being the flap, and a planar 3-chloro-benzoate anion (r.m.s. deviation for the 10 non-H atoms = 0.021 Å). The most prominent feature of the crystal packing are N-H⋯O hydrogen bonds whereby the two amine H atoms bridge two carboxyl-ate O atoms resulting in the formation of a centrosymmetric 12-membered {⋯HNH⋯OCO}2 synthon involving two cations and two anions. These aggregates are linked by C-H⋯O inter-actions to form a supra-molecular chain along the a-axis direction.Entities:
Keywords: 2-amino-3-ethyl-4,5-dihydro-1,3-thiazol-3-ium cation; 3-chlorobenzoate anion; crystal structure; hydrogen bonding; salt
Year: 2015 PMID: 26090175 PMCID: PMC4459344 DOI: 10.1107/S2056989015008385
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C5H11N2S+·C7H4ClO2− | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6990 reflections | |
| θ = 2.9–28.6° | |
| µ = 0.43 mm−1 | |
| α = 70.728 (3)° | |
| β = 80.269 (3)° | Slab, colourless |
| γ = 71.531 (3)° | 0.37 × 0.32 × 0.06 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 3430 independent reflections |
| Radiation source: fine-focus sealed tube | 1957 reflections with |
| Graphite monochromator | |
| Detector resolution: 83.66 pixels mm-1 | θmax = 28.6°, θmin = 2.9° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 16295 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3430 reflections | (Δ/σ)max < 0.001 |
| 171 parameters | Δρmax = 0.31 e Å−3 |
| 2 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 1.18120 (11) | −0.25267 (10) | 1.66658 (6) | 0.0724 (3) | |
| S1 | 0.48369 (9) | 0.37155 (8) | 0.90259 (5) | 0.0493 (2) | |
| O1 | 1.0531 (3) | −0.2998 (2) | 1.16212 (16) | 0.0570 (5) | |
| O2 | 0.9540 (3) | −0.0771 (3) | 1.22844 (19) | 0.0855 (7) | |
| N1 | 0.4326 (3) | 0.1591 (3) | 1.10804 (19) | 0.0523 (6) | |
| N2 | 0.7549 (3) | 0.1491 (3) | 1.0431 (2) | 0.0514 (6) | |
| H2B | 0.835 (3) | 0.189 (3) | 0.9867 (19) | 0.064 (9)* | |
| H2C | 0.810 (3) | 0.068 (2) | 1.1024 (17) | 0.059 (8)* | |
| C1 | 1.1263 (3) | −0.3301 (3) | 1.3595 (2) | 0.0383 (5) | |
| C2 | 1.2154 (3) | −0.4996 (3) | 1.3822 (2) | 0.0459 (6) | |
| H2A | 1.2237 | −0.5512 | 1.3230 | 0.055* | |
| C3 | 1.2921 (4) | −0.5927 (3) | 1.4918 (2) | 0.0545 (7) | |
| H3A | 1.3509 | −0.7072 | 1.5065 | 0.065* | |
| C4 | 1.2829 (4) | −0.5184 (3) | 1.5798 (2) | 0.0523 (7) | |
| H4A | 1.3353 | −0.5812 | 1.6537 | 0.063* | |
| C5 | 1.1949 (3) | −0.3501 (3) | 1.5564 (2) | 0.0441 (6) | |
| C6 | 1.1164 (3) | −0.2547 (3) | 1.4475 (2) | 0.0416 (6) | |
| H6A | 1.0571 | −0.1405 | 1.4335 | 0.050* | |
| C7 | 1.0367 (3) | −0.2280 (3) | 1.2403 (2) | 0.0468 (6) | |
| C8 | 0.5708 (3) | 0.2094 (3) | 1.0315 (2) | 0.0406 (6) | |
| C9 | 0.2384 (4) | 0.2374 (4) | 1.0666 (3) | 0.0713 (9) | |
| H9A | 0.1472 | 0.2595 | 1.1336 | 0.086* | |
| H9B | 0.2010 | 0.1635 | 1.0351 | 0.086* | |
| C10 | 0.2390 (3) | 0.3967 (4) | 0.9701 (3) | 0.0609 (8) | |
| H10A | 0.1996 | 0.4898 | 1.0043 | 0.073* | |
| H10B | 0.1511 | 0.4184 | 0.9096 | 0.073* | |
| C11 | 0.4633 (5) | 0.0131 (4) | 1.2191 (3) | 0.0694 (9) | |
| H11A | 0.3912 | −0.0612 | 1.2173 | 0.083* | |
| H11B | 0.5988 | −0.0486 | 1.2200 | 0.083* | |
| C12 | 0.4029 (5) | 0.0639 (4) | 1.3300 (3) | 0.0829 (10) | |
| H12A | 0.4251 | −0.0338 | 1.3995 | 0.124* | |
| H12B | 0.2683 | 0.1232 | 1.3303 | 0.124* | |
| H12C | 0.4758 | 0.1357 | 1.3330 | 0.124* |
| Cl1 | 0.0822 (6) | 0.0905 (6) | 0.0555 (5) | −0.0246 (5) | −0.0093 (4) | −0.0333 (4) |
| S1 | 0.0453 (4) | 0.0562 (4) | 0.0395 (4) | −0.0020 (3) | −0.0132 (3) | −0.0117 (3) |
| O1 | 0.0605 (11) | 0.0701 (13) | 0.0473 (10) | −0.0239 (9) | −0.0116 (9) | −0.0172 (10) |
| O2 | 0.1099 (18) | 0.0587 (14) | 0.0682 (14) | 0.0216 (12) | −0.0489 (13) | −0.0156 (10) |
| N1 | 0.0438 (12) | 0.0556 (14) | 0.0474 (12) | −0.0072 (10) | −0.0040 (10) | −0.0085 (10) |
| N2 | 0.0411 (13) | 0.0547 (15) | 0.0449 (13) | 0.0008 (11) | −0.0117 (11) | −0.0065 (11) |
| C1 | 0.0318 (12) | 0.0416 (14) | 0.0396 (13) | −0.0133 (10) | −0.0043 (10) | −0.0060 (10) |
| C2 | 0.0431 (14) | 0.0437 (15) | 0.0527 (15) | −0.0128 (11) | −0.0046 (12) | −0.0154 (12) |
| C3 | 0.0549 (16) | 0.0369 (15) | 0.0627 (18) | −0.0070 (12) | −0.0120 (14) | −0.0050 (13) |
| C4 | 0.0476 (15) | 0.0547 (18) | 0.0445 (14) | −0.0119 (13) | −0.0136 (12) | 0.0011 (13) |
| C5 | 0.0371 (13) | 0.0566 (16) | 0.0417 (14) | −0.0189 (12) | −0.0008 (11) | −0.0138 (12) |
| C6 | 0.0366 (13) | 0.0378 (13) | 0.0473 (14) | −0.0087 (10) | −0.0045 (11) | −0.0096 (11) |
| C7 | 0.0361 (13) | 0.0573 (18) | 0.0436 (14) | −0.0125 (12) | −0.0091 (11) | −0.0080 (13) |
| C8 | 0.0463 (15) | 0.0370 (13) | 0.0376 (13) | −0.0010 (11) | −0.0101 (11) | −0.0167 (11) |
| C9 | 0.0454 (17) | 0.095 (2) | 0.0659 (19) | −0.0181 (16) | −0.0046 (14) | −0.0148 (18) |
| C10 | 0.0399 (15) | 0.0683 (19) | 0.0718 (19) | −0.0033 (13) | −0.0153 (14) | −0.0231 (16) |
| C11 | 0.074 (2) | 0.0483 (17) | 0.068 (2) | −0.0075 (15) | −0.0001 (16) | −0.0059 (15) |
| C12 | 0.100 (3) | 0.075 (2) | 0.063 (2) | −0.0175 (19) | −0.0161 (19) | −0.0080 (18) |
| Cl1—C5 | 1.743 (3) | C3—H3A | 0.9300 |
| S1—C8 | 1.746 (2) | C4—C5 | 1.368 (4) |
| S1—C10 | 1.811 (3) | C4—H4A | 0.9300 |
| O1—C7 | 1.245 (3) | C5—C6 | 1.377 (3) |
| O2—C7 | 1.243 (3) | C6—H6A | 0.9300 |
| N1—C8 | 1.320 (3) | C9—C10 | 1.483 (4) |
| N1—C9 | 1.460 (3) | C9—H9A | 0.9700 |
| N1—C11 | 1.485 (3) | C9—H9B | 0.9700 |
| N2—C8 | 1.298 (3) | C10—H10A | 0.9700 |
| N2—H2B | 0.866 (10) | C10—H10B | 0.9700 |
| N2—H2C | 0.862 (10) | C11—C12 | 1.465 (4) |
| C1—C6 | 1.379 (3) | C11—H11A | 0.9700 |
| C1—C2 | 1.379 (3) | C11—H11B | 0.9700 |
| C1—C7 | 1.514 (3) | C12—H12A | 0.9600 |
| C2—C3 | 1.376 (3) | C12—H12B | 0.9600 |
| C2—H2A | 0.9300 | C12—H12C | 0.9600 |
| C3—C4 | 1.373 (4) | ||
| C8—S1—C10 | 90.90 (12) | N2—C8—N1 | 126.9 (2) |
| C8—N1—C9 | 115.4 (2) | N2—C8—S1 | 120.1 (2) |
| C8—N1—C11 | 125.1 (2) | N1—C8—S1 | 112.98 (17) |
| C9—N1—C11 | 118.6 (2) | N1—C9—C10 | 107.9 (2) |
| C8—N2—H2B | 120.1 (19) | N1—C9—H9A | 110.1 |
| C8—N2—H2C | 126.2 (18) | C10—C9—H9A | 110.1 |
| H2B—N2—H2C | 114 (3) | N1—C9—H9B | 110.1 |
| C6—C1—C2 | 119.3 (2) | C10—C9—H9B | 110.1 |
| C6—C1—C7 | 120.2 (2) | H9A—C9—H9B | 108.4 |
| C2—C1—C7 | 120.5 (2) | C9—C10—S1 | 106.45 (18) |
| C3—C2—C1 | 120.3 (2) | C9—C10—H10A | 110.4 |
| C3—C2—H2A | 119.8 | S1—C10—H10A | 110.4 |
| C1—C2—H2A | 119.8 | C9—C10—H10B | 110.4 |
| C4—C3—C2 | 120.7 (2) | S1—C10—H10B | 110.4 |
| C4—C3—H3A | 119.7 | H10A—C10—H10B | 108.6 |
| C2—C3—H3A | 119.7 | C12—C11—N1 | 112.1 (3) |
| C5—C4—C3 | 118.6 (2) | C12—C11—H11A | 109.2 |
| C5—C4—H4A | 120.7 | N1—C11—H11A | 109.2 |
| C3—C4—H4A | 120.7 | C12—C11—H11B | 109.2 |
| C4—C5—C6 | 121.6 (2) | N1—C11—H11B | 109.2 |
| C4—C5—Cl1 | 119.55 (19) | H11A—C11—H11B | 107.9 |
| C6—C5—Cl1 | 118.8 (2) | C11—C12—H12A | 109.5 |
| C5—C6—C1 | 119.5 (2) | C11—C12—H12B | 109.5 |
| C5—C6—H6A | 120.3 | H12A—C12—H12B | 109.5 |
| C1—C6—H6A | 120.3 | C11—C12—H12C | 109.5 |
| O2—C7—O1 | 125.3 (2) | H12A—C12—H12C | 109.5 |
| O2—C7—C1 | 116.6 (2) | H12B—C12—H12C | 109.5 |
| O1—C7—C1 | 118.1 (2) | ||
| C6—C1—C2—C3 | 0.5 (4) | C2—C1—C7—O1 | −3.0 (3) |
| C7—C1—C2—C3 | −178.3 (2) | C9—N1—C8—N2 | −174.0 (3) |
| C1—C2—C3—C4 | −0.6 (4) | C11—N1—C8—N2 | −5.0 (4) |
| C2—C3—C4—C5 | 0.3 (4) | C9—N1—C8—S1 | 4.8 (3) |
| C3—C4—C5—C6 | 0.0 (4) | C11—N1—C8—S1 | 173.7 (2) |
| C3—C4—C5—Cl1 | 179.99 (19) | C10—S1—C8—N2 | −171.3 (2) |
| C4—C5—C6—C1 | −0.1 (4) | C10—S1—C8—N1 | 9.8 (2) |
| Cl1—C5—C6—C1 | 179.95 (18) | C8—N1—C9—C10 | −20.9 (4) |
| C2—C1—C6—C5 | −0.2 (3) | C11—N1—C9—C10 | 169.4 (3) |
| C7—C1—C6—C5 | 178.6 (2) | N1—C9—C10—S1 | 26.1 (3) |
| C6—C1—C7—O2 | −1.0 (3) | C8—S1—C10—C9 | −20.7 (2) |
| C2—C1—C7—O2 | 177.8 (2) | C8—N1—C11—C12 | 112.8 (3) |
| C6—C1—C7—O1 | 178.2 (2) | C9—N1—C11—C12 | −78.6 (4) |
| H··· | ||||
| N2—H2 | 0.87 (2) | 1.89 (2) | 2.730 (3) | 164 (2) |
| N2—H2 | 0.86 (2) | 1.83 (2) | 2.680 (3) | 169 (2) |
| C10—H10 | 0.97 | 2.46 | 3.297 (4) | 145 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| N2H2 | 0.87(2) | 1.89(2) | 2.730(3) | 164(2) |
| N2H2 | 0.86(2) | 1.83(2) | 2.680(3) | 169(2) |
| C10H10 | 0.97 | 2.46 | 3.297(4) | 145 |
Symmetry codes: (i) ; (ii) .