Literature DB >> 26088134

Functional Relationship of ATP Hydrolysis, Presynaptic Filament Stability, and Homologous DNA Pairing Activity of the Human Meiotic Recombinase DMC1.

Hao-Yen Chang1, Chia-Yu Liao1, Guan-Chin Su1, Sheng-Wei Lin2, Hong-Wei Wang3, Peter Chi4.   

Abstract

DMC1 and RAD51 are conserved recombinases that catalyze homologous recombination. DMC1 and RAD51 share similar properties in DNA binding, DNA-stimulated ATP hydrolysis, and catalysis of homologous DNA strand exchange. A large body of evidence indicates that attenuation of ATP hydrolysis leads to stabilization of the RAD51-ssDNA presynaptic filament and enhancement of DNA strand exchange. However, the functional relationship of ATPase activity, presynaptic filament stability, and DMC1-mediated homologous DNA strand exchange has remained largely unexplored. To address this important question, we have constructed several mutant variants of human DMC1 and characterized them biochemically to gain mechanistic insights. Two mutations, K132R and D223N, that change key residues in the Walker A and B nucleotide-binding motifs ablate ATP binding and render DMC1 inactive. On the other hand, the nucleotide-binding cap D317K mutant binds ATP normally but shows significantly attenuated ATPase activity and, accordingly, forms a highly stable presynaptic filament. Surprisingly, unlike RAD51, presynaptic filament stabilization achieved via ATP hydrolysis attenuation does not lead to any enhancement of DMC1-catalyzed homologous DNA pairing and strand exchange. This conclusion is further supported by examining wild-type DMC1 with non-hydrolyzable ATP analogues. Thus, our results reveal an important mechanistic difference between RAD51 and DMC1.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  ATP; ATPase; DMC1; DNA enzyme; DNA recombination; DNA-binding protein; homologous recombination; presynaptic filament; protein-DNA interaction; recombinase activity

Mesh:

Substances:

Year:  2015        PMID: 26088134      PMCID: PMC4528146          DOI: 10.1074/jbc.M115.666289

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  41 in total

1.  Meiotic recombination: an affair of two recombinases.

Authors:  Michael G Sehorn; Patrick Sung
Journal:  Cell Cycle       Date:  2004-11-20       Impact factor: 4.534

2.  Conserved Asp327 of walker B motif in the N-terminal nucleotide binding domain (NBD-1) of Cdr1p of Candida albicans has acquired a new role in ATP hydrolysis.

Authors:  Versha Rai; Manisha Gaur; Sudhanshu Shukla; Suneet Shukla; Suresh V Ambudkar; Sneha Sudha Komath; Rajendra Prasad
Journal:  Biochemistry       Date:  2006-12-12       Impact factor: 3.162

Review 3.  Mutations arising during repair of chromosome breaks.

Authors:  Anna Malkova; James E Haber
Journal:  Annu Rev Genet       Date:  2012       Impact factor: 16.830

4.  The Walker B motif of the second nucleotide-binding domain (NBD2) of CFTR plays a key role in ATPase activity by the NBD1-NBD2 heterodimer.

Authors:  Fiona L L Stratford; Mohabir Ramjeesingh; Joanne C Cheung; Ling-Jun Huan; Christine E Bear
Journal:  Biochem J       Date:  2007-01-15       Impact factor: 3.857

5.  The RecA/RAD51 protein drives migration of Holliday junctions via polymerization on DNA.

Authors:  Matthew J Rossi; Olga M Mazina; Dmitry V Bugreev; Alexander V Mazin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

6.  A mutation in mouse rad51 results in an early embryonic lethal that is suppressed by a mutation in p53.

Authors:  D S Lim; P Hasty
Journal:  Mol Cell Biol       Date:  1996-12       Impact factor: 4.272

7.  Ca2+ activates human homologous recombination protein Rad51 by modulating its ATPase activity.

Authors:  Dmitry V Bugreev; Alexander V Mazin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-28       Impact factor: 11.205

8.  Rad51 is an accessory factor for Dmc1-mediated joint molecule formation during meiosis.

Authors:  Veronica Cloud; Yuen-Ling Chan; Jennifer Grubb; Brian Budke; Douglas K Bishop
Journal:  Science       Date:  2012-09-07       Impact factor: 47.728

9.  A novel function for the conserved glutamate residue in the walker B motif of replication factor C.

Authors:  Ankita Chiraniya; Jeff Finkelstein; Mike O'Donnell; Linda B Bloom
Journal:  Genes (Basel)       Date:  2013-03-26       Impact factor: 4.096

10.  Meiotic crossover control by concerted action of Rad51-Dmc1 in homolog template bias and robust homeostatic regulation.

Authors:  Jessica P Lao; Veronica Cloud; Chu-Chun Huang; Jennifer Grubb; Drew Thacker; Chih-Ying Lee; Michael E Dresser; Neil Hunter; Douglas K Bishop
Journal:  PLoS Genet       Date:  2013-12-19       Impact factor: 5.917

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  7 in total

1.  Dynamic interactions of the homologous pairing 2 (Hop2)-meiotic nuclear divisions 1 (Mnd1) protein complex with meiotic presynaptic filaments in budding yeast.

Authors:  J Brooks Crickard; Youngho Kwon; Patrick Sung; Eric C Greene
Journal:  J Biol Chem       Date:  2018-11-12       Impact factor: 5.157

2.  Rad51 facilitates filament assembly of meiosis-specific Dmc1 recombinase.

Authors:  Wei-Hsuan Lan; Sheng-Yao Lin; Chih-Yuan Kao; Wen-Hsuan Chang; Hsin-Yi Yeh; Hao-Yen Chang; Peter Chi; Hung-Wen Li
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-13       Impact factor: 11.205

Review 3.  Repair of DNA double-strand breaks in plant meiosis: role of eukaryotic RecA recombinases and their modulators.

Authors:  Côme Emmenecker; Christine Mézard; Rajeev Kumar
Journal:  Plant Reprod       Date:  2022-06-01       Impact factor: 3.767

4.  Mechanisms of distinctive mismatch tolerance between Rad51 and Dmc1 in homologous recombination.

Authors:  Jingfei Xu; Lingyun Zhao; Sijia Peng; Huiying Chu; Rui Liang; Meng Tian; Philip P Connell; Guohui Li; Chunlai Chen; Hong-Wei Wang
Journal:  Nucleic Acids Res       Date:  2021-12-16       Impact factor: 16.971

5.  Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.

Authors:  Shih-Chi Luo; Hsin-Yi Yeh; Wei-Hsuan Lan; Yi-Min Wu; Cheng-Han Yang; Hao-Yen Chang; Guan-Chin Su; Chia-Yi Lee; Wen-Jin Wu; Hung-Wen Li; Meng-Chiao Ho; Peter Chi; Ming-Daw Tsai
Journal:  Nat Commun       Date:  2021-01-14       Impact factor: 14.919

6.  Microcephaly family protein MCPH1 stabilizes RAD51 filaments.

Authors:  Hao-Yen Chang; Chia-Yi Lee; Chih-Hao Lu; Wei Lee; Han-Lin Yang; Hsin-Yi Yeh; Hung-Wen Li; Peter Chi
Journal:  Nucleic Acids Res       Date:  2020-09-18       Impact factor: 16.971

7.  Simultaneous TALEN-mediated knockout of chrysanthemum DMC1 genes confers male and female sterility.

Authors:  Harue Shinoyama; Hiroaki Ichikawa; Ayako Nishizawa-Yokoi; Mikhail Skaptsov; Seiichi Toki
Journal:  Sci Rep       Date:  2020-09-30       Impact factor: 4.379

  7 in total

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