Literature DB >> 26072113

The Caenorhabditis elegans lipidome: A primer for lipid analysis in Caenorhabditis elegans.

Michael Witting1, Philippe Schmitt-Kopplin2.   

Abstract

Lipids play important roles in biology, ranging from building blocks of membranes to signaling lipids. The nematode and model organism Caenorhabditis elegans has been used to explore lipid metabolism and several techniques for their analysis have been employed. These techniques include different possibilities ranging from visualization of lipid droplets, analysis of total fatty acids to analysis of complex lipids using lipidomics approaches. Lipidomics evolved from metabolomics, the latest off-spring of the "omics"-technologies and aims to characterize the lipid content of a given organism or system. Although being an extensively studied model organism, only a few applications of lipidomics to C. elegans have been reported to far, but the number is steadily increasing with more applications expected in the near future. This review gives an overview on the C. elegans lipidome, lipid classes it contains and ways to analyze them. It serves as primer for scientists interested in studying lipids in this model organism and list methods used so far and what information can be derived from them. Lastly, challenges and future (methodological) research directions, together with new methods potentially useful for C. elegans lipid research are discussed.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Caenorhabditis elegans; Lipid analysis; Lipidomics; Model organism

Mesh:

Substances:

Year:  2015        PMID: 26072113     DOI: 10.1016/j.abb.2015.06.003

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  17 in total

1.  Quantification of Lipid Abundance and Evaluation of Lipid Distribution in Caenorhabditis elegans by Nile Red and Oil Red O Staining.

Authors:  Wilber Escorcia; Dana L Ruter; James Nhan; Sean P Curran
Journal:  J Vis Exp       Date:  2018-03-05       Impact factor: 1.355

Review 2.  Current advances in the functional studies of fatty acids and fatty acid-derived lipids in C. elegans.

Authors:  Lu Ying; Huanhu Zhu
Journal:  Worm       Date:  2016-05-04

Review 3.  Lipidomics: Techniques, Applications, and Outcomes Related to Biomedical Sciences.

Authors:  Kui Yang; Xianlin Han
Journal:  Trends Biochem Sci       Date:  2016-09-20       Impact factor: 13.807

Review 4.  Lipid and Carbohydrate Metabolism in Caenorhabditis elegans.

Authors:  Jennifer L Watts; Michael Ristow
Journal:  Genetics       Date:  2017-10       Impact factor: 4.562

Review 5.  Quo Vadis Caenorhabditis elegans Metabolomics-A Review of Current Methods and Applications to Explore Metabolism in the Nematode.

Authors:  Liesa Salzer; Michael Witting
Journal:  Metabolites       Date:  2021-04-29

6.  Lipid Extraction and Analysis.

Authors:  Henry H Harrison; Jennifer L Watts
Journal:  Methods Mol Biol       Date:  2022

7.  A sensitive mass spectrometry platform identifies metabolic changes of life history traits in C. elegans.

Authors:  Arwen W Gao; Iliana A Chatzispyrou; Rashmi Kamble; Yasmine J Liu; Katharina Herzog; Reuben L Smith; Henk van Lenthe; Martin A T Vervaart; Arno van Cruchten; Angela C Luyf; Antoine van Kampen; Mia L Pras-Raves; Frédéric M Vaz; Riekelt H Houtkooper
Journal:  Sci Rep       Date:  2017-05-25       Impact factor: 4.379

8.  LipidFrag: Improving reliability of in silico fragmentation of lipids and application to the Caenorhabditis elegans lipidome.

Authors:  Michael Witting; Christoph Ruttkies; Steffen Neumann; Philippe Schmitt-Kopplin
Journal:  PLoS One       Date:  2017-03-09       Impact factor: 3.240

9.  Impact of 17β-HSD12, the 3-ketoacyl-CoA reductase of long-chain fatty acid synthesis, on breast cancer cell proliferation and migration.

Authors:  Maria Tsachaki; Pirmin Strauss; Anja Dunkel; Hana Navrátilová; Natasa Mladenovic; Alex Odermatt
Journal:  Cell Mol Life Sci       Date:  2019-07-13       Impact factor: 9.261

10.  Modeling Meets Metabolomics-The WormJam Consensus Model as Basis for Metabolic Studies in the Model Organism Caenorhabditis elegans.

Authors:  Michael Witting; Janna Hastings; Nicolas Rodriguez; Chintan J Joshi; Jake P N Hattwell; Paul R Ebert; Michel van Weeghel; Arwen W Gao; Michael J O Wakelam; Riekelt H Houtkooper; Abraham Mains; Nicolas Le Novère; Sean Sadykoff; Frank Schroeder; Nathan E Lewis; Horst-Joachim Schirra; Christoph Kaleta; Olivia Casanueva
Journal:  Front Mol Biosci       Date:  2018-11-14
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