Literature DB >> 26057606

Relating structure and function of viral membrane-spanning miniproteins.

Stanley J Opella1.   

Abstract

Many viruses express small hydrophobic membrane proteins. These proteins are often referred to as viroporins because they exhibit ion channel activity. However, the channel activity has not been definitively associated with a biological function in all cases. More generally, protein-protein and protein-phospholipid interactions have been associated with specific biological activities of these proteins. As research has progressed there is a decreased emphasis on potential roles of the channel activity, and increased research on multiple other biological functions. This being the case, it may be more appropriate to refer to them as 'viral membrane-spanning miniproteins'. Structural studies are illustrated with Vpu from HIV-1 and p7 from HCV.
Copyright © 2015 Elsevier B.V. All rights reserved.

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Year:  2015        PMID: 26057606      PMCID: PMC4476644          DOI: 10.1016/j.coviro.2015.05.006

Source DB:  PubMed          Journal:  Curr Opin Virol        ISSN: 1879-6257            Impact factor:   7.090


  58 in total

1.  Membrane interactions and alignment of structures within the HIV-1 Vpu cytoplasmic domain: effect of phosphorylation of serines 52 and 56.

Authors:  P Henklein; R Kinder; U Schubert; B Bechinger
Journal:  FEBS Lett       Date:  2000-10-06       Impact factor: 4.124

2.  Oligomerization state and supramolecular structure of the HIV-1 Vpu protein transmembrane segment in phospholipid bilayers.

Authors:  Jun-Xia Lu; Simon Sharpe; Rodolfo Ghirlando; Wai-Ming Yau; Robert Tycko
Journal:  Protein Sci       Date:  2010-10       Impact factor: 6.725

Review 3.  Influence of solubilizing environments on membrane protein structures.

Authors:  Timothy A Cross; Mukesh Sharma; Myunggi Yi; Huan-Xiang Zhou
Journal:  Trends Biochem Sci       Date:  2010-08-18       Impact factor: 13.807

4.  Conformational analysis of the full-length M2 protein of the influenza A virus using solid-state NMR.

Authors:  Shu Yu Liao; Keith J Fritzsching; Mei Hong
Journal:  Protein Sci       Date:  2013-10-07       Impact factor: 6.725

Review 5.  Magic angle spinning NMR of proteins: high-frequency dynamic nuclear polarization and (1)H detection.

Authors:  Yongchao Su; Loren Andreas; Robert G Griffin
Journal:  Annu Rev Biochem       Date:  2015-03-30       Impact factor: 23.643

6.  A single amino acid substitution within the transmembrane domain of the human immunodeficiency virus type 1 Vpu protein renders simian-human immunodeficiency virus (SHIV(KU-1bMC33)) susceptible to rimantadine.

Authors:  David R Hout; Lisa M Gomez; Erik Pacyniak; Jean-Marie Miller; M Sarah Hill; Edward B Stephens
Journal:  Virology       Date:  2006-02-03       Impact factor: 3.616

7.  Synthesis and characterization of the hydrophilic C-terminal domain of the human immunodeficiency virus type 1-encoded virus protein U (Vpu).

Authors:  P Henklein; U Schubert; O Kunert; S Klabunde; V Wray; K D Klöppel; M Kiess; T Portsmann; D Schomburg
Journal:  Pept Res       Date:  1993 Mar-Apr

Review 8.  Hepatitis C virus proteins: from structure to function.

Authors:  Darius Moradpour; François Penin
Journal:  Curr Top Microbiol Immunol       Date:  2013       Impact factor: 4.291

9.  Solution structure of the cytoplasmic domain of the human immunodeficiency virus type 1 encoded virus protein U (Vpu).

Authors:  T Federau; U Schubert; J Flossdorf; P Henklein; D Schomburg; V Wray
Journal:  Int J Pept Protein Res       Date:  1996-04

10.  Epitope mapping of the phosphorylation motif of the HIV-1 protein Vpu bound to the selective monoclonal antibody using TRNOESY and STD NMR spectroscopy.

Authors:  Josyane Gharbi-Benarous; Gildas Bertho; Nathalie Evrard-Todeschi; Gaël Coadou; Simon Megy; Thierry Delaunay; Richard Benarous; Jean-Pierre Girault
Journal:  Biochemistry       Date:  2004-11-23       Impact factor: 3.162

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  8 in total

Review 1.  Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Authors:  Akira Naito; Nobuaki Matsumori; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-06-06       Impact factor: 3.770

2.  1H-detected MAS solid-state NMR experiments enable the simultaneous mapping of rigid and dynamic domains of membrane proteins.

Authors:  T Gopinath; Sarah E D Nelson; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2017-12       Impact factor: 2.229

3.  Structure-Function Analysis of Two Interacting Vaccinia Proteins That Are Critical for Viral Morphogenesis: L2 and A30.5.

Authors:  Juliana Debrito Carten; Matthew Greseth; Paula Traktman
Journal:  J Virol       Date:  2021-11-03       Impact factor: 6.549

Review 4.  Perturbations of Native Membrane Protein Structure in Alkyl Phosphocholine Detergents: A Critical Assessment of NMR and Biophysical Studies.

Authors:  Christophe Chipot; François Dehez; Jason R Schnell; Nicole Zitzmann; Eva Pebay-Peyroula; Laurent J Catoire; Bruno Miroux; Edmund R S Kunji; Gianluigi Veglia; Timothy A Cross; Paul Schanda
Journal:  Chem Rev       Date:  2018-02-28       Impact factor: 60.622

5.  The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation.

Authors:  Renata Grzela; Julien Nusbaum; Sonia Fieulaine; Francesco Lavecchia; Willy V Bienvenut; Cyril Dian; Thierry Meinnel; Carmela Giglione
Journal:  Sci Rep       Date:  2017-09-08       Impact factor: 4.379

Review 6.  Beyond Channel Activity: Protein-Protein Interactions Involving Viroporins.

Authors:  Janet To; Jaume Torres
Journal:  Subcell Biochem       Date:  2018

Review 7.  Targeting the Channel Activity of Viroporins.

Authors:  Janet To; Wahyu Surya; Jaume Torres
Journal:  Adv Protein Chem Struct Biol       Date:  2016-01-07       Impact factor: 3.507

Review 8.  Solid-State NMR for Studying the Structure and Dynamics of Viral Assemblies.

Authors:  Lauriane Lecoq; Marie-Laure Fogeron; Beat H Meier; Michael Nassal; Anja Böckmann
Journal:  Viruses       Date:  2020-09-24       Impact factor: 5.048

  8 in total

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