Literature DB >> 26048196

Metagenomics of extreme environments.

D A Cowan1, J-B Ramond2, T P Makhalanyane2, P De Maayer2.   

Abstract

Whether they are exposed to extremes of heat or cold, or buried deep beneath the Earth's surface, microorganisms have an uncanny ability to survive under these conditions. This ability to survive has fascinated scientists for nearly a century, but the recent development of metagenomics and 'omics' tools has allowed us to make huge leaps in understanding the remarkable complexity and versatility of extremophile communities. Here, in the context of the recently developed metagenomic tools, we discuss recent research on the community composition, adaptive strategies and biological functions of extremophiles.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26048196     DOI: 10.1016/j.mib.2015.05.005

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  26 in total

Review 1.  Extreme environments: a source of biosurfactants for biotechnological applications.

Authors:  Júnia Schultz; Alexandre Soares Rosado
Journal:  Extremophiles       Date:  2019-12-11       Impact factor: 2.395

2.  A meta-taxonomic investigation of the prokaryotic diversity of water bodies impacted by acid mine drainage from the São Domingos mine in southern Portugal.

Authors:  Sara Ettamimi; Jorge D Carlier; Cymon J Cox; Youssef Elamine; Khalil Hammani; Hassan Ghazal; Maria C Costa
Journal:  Extremophiles       Date:  2019-10-09       Impact factor: 2.395

3.  Evaluation of temperature, pH and nutrient conditions in bacterial growth and extracellular hydrolytic activities of two Alicyclobacillus spp. strains.

Authors:  Lourdes Yaret Ortiz-Cortés; Lucía María Cristina Ventura-Canseco; Miguel Abud-Archila; Víctor Manuel Ruíz-Valdiviezo; Irving Oswaldo Velázquez-Ríos; Peggy Elizabeth Alvarez-Gutiérrez
Journal:  Arch Microbiol       Date:  2021-06-22       Impact factor: 2.552

4.  Efficient DNA sequence compression with neural networks.

Authors:  Milton Silva; Diogo Pratas; Armando J Pinho
Journal:  Gigascience       Date:  2020-11-11       Impact factor: 6.524

5.  Acidithiobacillus ferrivorans SS3 presents little RNA transcript response related to cold stress during growth at 8 °C suggesting it is a eurypsychrophile.

Authors:  Stephan Christel; Jimmy Fridlund; Elizabeth L Watkin; Mark Dopson
Journal:  Extremophiles       Date:  2016-10-25       Impact factor: 2.395

6.  Bacterial and archeal community composition in hot springs from Indo-Burma region, North-east India.

Authors:  Amrita Kumari Panda; Satpal Singh Bisht; Surajit De Mandal; Nachimuthu Senthil Kumar
Journal:  AMB Express       Date:  2016-11-10       Impact factor: 3.298

7.  Age-related environmental gradients influence invertebrate distribution in the Prince Charles Mountains, East Antarctica.

Authors:  Paul Czechowski; Duanne White; Laurence Clarke; Alan McKay; Alan Cooper; Mark I Stevens
Journal:  R Soc Open Sci       Date:  2016-12-14       Impact factor: 2.963

8.  Evolution of Bordetellae from Environmental Microbes to Human Respiratory Pathogens: Amoebae as a Missing Link.

Authors:  Dawn L Taylor-Mulneix; Illiassou Hamidou Soumana; Bodo Linz; Eric T Harvill
Journal:  Front Cell Infect Microbiol       Date:  2017-12-11       Impact factor: 5.293

9.  Draft genome sequence of Thermoactinomyces sp. strain AS95 isolated from a Sebkha in Thamelaht, Algeria.

Authors:  Oliver K I Bezuidt; Mohamed A Gomri; Rian Pierneef; Marc W Van Goethem; Karima Kharroub; Don A Cowan; Thulani P Makhalanyane
Journal:  Stand Genomic Sci       Date:  2016-09-09

Review 10.  Freshwater Metaviromics and Bacteriophages: A Current Assessment of the State of the Art in Relation to Bioinformatic Challenges.

Authors:  Katherine Bruder; Kema Malki; Alexandria Cooper; Emily Sible; Jason W Shapiro; Siobhan C Watkins; Catherine Putonti
Journal:  Evol Bioinform Online       Date:  2016-06-20       Impact factor: 1.625

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