| Literature DB >> 26035097 |
Marta Marín-Luna1, Ibon Alkorta2, José Elguero1, Otilia Mó3, Manuel Yáñez4.
Abstract
A theoretical study of the beryllium bonds in BeR2:C6X6 (R = H, F, Cl and X = H and F) has been carried out by means of MP2/aug'-cc-pVDZ computational methods. In addition, the ternary complexes BeR2:C6X6:Y- (Y = Cl and Br) have been analyzed. Geometric, energetic and electronic aspects of the complexes have been taken into account. All the parameters analyzed provide a clear indication of favorable cooperativity in both interactions observed, beryllium bond and aromatic ring:anion interaction.Entities:
Keywords: ab initio calculations; anion-π interactions; beryllium-π interactions; cooperativity
Mesh:
Substances:
Year: 2015 PMID: 26035097 PMCID: PMC6272305 DOI: 10.3390/molecules20069961
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Electrostatic potential on the 0.001 au electron density of the isolated C6H6 (left) and C6F6 (right). The most intense red and blue color regions correspond to the −0.02 and +0.03 au values, respectively.
Binding energies (kJ/mol), intermolecular distances (Å) and R-Be-R bond angle (°) of the BeR2:C6X6 binary complexes.
| System | Eb | Be···Z* | > R-Be-R | System | Eb | Be···Z* | > R-Be-R |
|---|---|---|---|---|---|---|---|
| BeH2:C6H6 | −25.7 | 2.575 | 157.5 | BeH2:C6F6 | −13.1 | 2.945 | 179.0 |
| BeF2:C6H6 | −41.4 | 2.214 | 146.4 | BeF2:C6F6 | −15.8 | 2.916 | 178.6 |
| BeCl2:C6H6 | −46.7 | 2.182 | 139.7 | BeCl2:C6F6 | −24.6 | 3.213 | 177.7 |
Z* represents the middle of the closest C-C bond of the aromatic system.
Figure 2Molecular graph of BeR2:C6H6 (R = H, Cl) (left) and BeR2:C6F6 (R = H, Cl) (right) binary complexes. Green, red and blue dots denote BCPs, ring critical points and cage critical points respectively. The value of the electron density at the intermolecular BCP is indicated.
NBO charges (e) of the aromatic system within the BeR2:C6X6 complexes.
| NBO Charges (e) | NBO Charges (e) | ||
|---|---|---|---|
| BeH2:C6H6 | 0.048 | BeH2:C6F6 | 0.017 |
| BeF2:C6H6 | 0.066 | BeF2:C6F6 | 0.005 |
| BeCl2:C6H6 | 0.116 | BeCl2:C6F6 | 0.012 |
AIM parameters (in au) for the BCPs corresponding to the intermolecular interactions in the BeR2:C6X6 binary systems, the electron density, ρBCP, its Laplacian, ∇2ρBCP, and the total electron energy density, HBCP.
| System | ρBCP | ∇2ρBCP | HBCP | Interaction |
|---|---|---|---|---|
| BeH2:C6H6 | 0.0157 | 0.0184 | -0.0028 | Be···π |
| BeF2:C6H6 | 0.0218 | 0.0409 | -0.0052 | Be···π |
| BeCl2:C6H6 | 0.0247 | 0.0577 | -0.0059 | Be···π |
| BeH2:C6F6 | 0.0085 | 0.0153 | -0.0001 | H···π |
| 0.0067 | 0.0192 | 0.0008 | H···π | |
| BeF2:C6F6 | 0.0091 | 0.0263 | 0.0008 | F···π |
| 0.0084 | 0.0320 | 0.0012 | F···π | |
| BeCl2:C6F6 | 0.0079 | 0.0180 | 0.0004 | Cl···π |
| 0.0085 | 0.0240 | 0.0008 | Cl···π |
Many body Interaction energy (MBIE) partition terms (kJ/mol) in the BeR2:C6X6 binary systems.
| System | Er(Ar) | Er(BeR2) | Δ2E(BeR2:C6H6) | System | Er(Ar) | Er(BeR2) | Δ2E(BeR2:C6F6) |
|---|---|---|---|---|---|---|---|
| BeH2:C6H6 | 0.2 | 10.7 | −36.6 | BeH2:C6F6 | 0.16 | 0.03 | −13.3 |
| BeF2:C6H6 | 0.5 | 26.3 | −68.2 | BeF2:C6F6 | 0.3 | 0.1 | −16.2 |
| BeCl2:C6H6 | 0.9 | 39.0 | −86.6 | BeCl2:C6F6 | 0.3 | 0.05 | −24.9 |
Figure 3Molecular graph of the C6H6:Cl− (left) and C6F6:Cl− (right) complexes. Green, red and blue dots denote BCPs, ring and cage critical points respectively. The value of the electron density at the intermolecular BCP is indicated.
Binding energy (kJ/mol), intermolecular distance (Å), distortion energy and Δ2E (kJ/mol) in the C6X6:Y− binary systems within the MBIE partition method.
| System | Eb | Y···HC | Er(C6H6) | Δ2E(C6H6:Y) | System | Eb | Y···Z* | Er(C6F6) | Δ2E(C6F6:Y) |
|---|---|---|---|---|---|---|---|---|---|
| C6H6:Br− | −34.4 | 2.902 | 1.2 | −35.6 | C6F6:Br− | −65.8 | 3.433 | 0.7 | −66.6 |
| C6H6:Cl− | −35.9 | 2.743 | 1.6 | −37.5 | C6F6:Cl− | −67.1 | 3.290 | 0.9 | −67.9 |
Z* represents the middle of one of the C-C bonds of the aromatic system.
Binding energy (kJ/mol), intermolecular distances (Å) and R-Be-R bond angle (°) of the ternary complexes. The variations with respect to the corresponding binary complexes are also added.
| System | Eb | Be···Z* | ∆Be···Z* | Y···Z* | ∆Y···Z* | ∠ R-Be-R | ∆∠ R-Be-R |
|---|---|---|---|---|---|---|---|
| BeH2:C6H6: Br− | −80.3 | 2.185 | −0.390 | 2.820 | −0.082 | 145.7 | −11.8 |
| BeH2:C6H6:Cl− | −83.2 | 2.177 | −0.398 | 2.658 | −0.085 | 145.2 | −12.3 |
| BeF2:C6H6:Br− | −104.6 | 2.089 | −0.125 | 2.802 | −0.100 | 138.1 | −8.3 |
| BeF2:C6H6:Cl− | −107.9 | 2.084 | −0.130 | 2.639 | −0.104 | 137.7 | −8.7 |
| BeCl2:C6H6 :Br− | −118.7 | 2.042 | −0.140 | 2.778 | −0.124 | 132.0 | −7.7 |
| BeCl2:C6H6:Cl− | −122.4 | 2.034 | −0.148 | 2.616 | −0.127 | 131.7 | −8.0 |
| BeH2:C6F6:Br− | −96.7 | 2.413 | −0.532 | 3.204 | −0.229 | 155.8 | −23.2 |
| BeH2:C6F6:Cl− | −99.0 | 2.396 | −0.549 | 3.031 | −0.259 | 154.8 | −24.2 |
| BeF2:C6F6:Br− | −112.8 | 2.270 | −0.646 | 3.156 | −0.277 | 144.6 | −34.0 |
| BeF2:C6F6:Cl− | −115.6 | 2.261 | −0.655 | 2.990 | −0.300 | 143.9 | −34.7 |
| BeCl2:C6F6:Br− | −122.5 | 2.253 | −0.960 | 3.126 | −0.307 | 137.9 | −39.8 |
| BeCl2:C6F6:Cl− | −125.8 | 2.242 | −0.971 | 2.957 | −0.333 | 137.2 | −40.5 |
Z* represents the middle of the closest C-C bond of the aromatic system.
Figure 4Molecular graph of BeCl2:C6H6:Cl− (left) and BeCl2:C6F6:Cl− (right). The value of the electron density at the intermolecular BCPs is indicated.
Many body Interaction energy (MBIE) partition term (kJ/mol) in the ternary systems *.
| System | Er(Ar) | Er(BeR2) | Δ2E(BeR2:Ar) | Δ2E(Ar:Y) | Δ2E(BeR2:Y) | Δ3E(BeR2:Ar:Y) |
|---|---|---|---|---|---|---|
| BeH2:C6H6: Br− | 2.1 | 25.8 | −48.2 | −34.5 | −4.3 | −21.1 |
| BeH2:C6H6:Cl− | 2.6 | 26.5 | −48.7 | −36.5 | −4.5 | −22.6 |
| BeF2:C6H6:Br− | 2.5 | 43.3 | −81.7 | −33.8 | −11.0 | −24.0 |
| BeF2:C6H6:Cl− | 3.0 | 44.3 | −82.3 | −35.8 | −11.5 | −25.6 |
| BeCl2:C6H6 :Br− | 3.4 | 58.4 | −103.0 | −33.1 | −11.6 | −32.8 |
| BeCl2:C6H6:Cl− | 4.0 | 59.3 | −103.6 | −35.1 | −12.1 | −34.8 |
| BeH2:C6F6:Br− | 1.7 | 12.4 | −16.1 | −65.2 | −16.7 | −12.9 |
| BeH2:C6F6:Cl− | 1.8 | 13.5 | −16.3 | −66.3 | −18.3 | −13.5 |
| BeF2:C6F6:Br− | 2.4 | 29.2 | −32.7 | −64.2 | −32.3 | −15.1 |
| BeF2:C6F6:Cl− | 2.4 | 30.4 | −33.1 | −65.2 | −34.7 | −15.4 |
| BeCl2:C6F6:Br− | 4.3 | 42.2 | −49.5 | −63.5 | −33.0 | −22.9 |
| BeCl2:C6F6:Cl− | 4.3 | 43.8 | −50.2 | −64.5 | −35.5 | −23.8 |
* The sum of these terms is equal to the binding energy.
AIM parameters (in au) for the BCPs corresponding to the Be···π and π···Y interactions in the ternary systems, the electron density, ρBCP, its Laplacian, ∇2ρBCP, and the total electron energy density, HBCP.
| System | Be···π | π···Y− | ||||
|---|---|---|---|---|---|---|
| ρBCP | ∇2ρBCP | HBCP | ρBCP | ∇2ρBCP | HBCP | |
| BeH2:C6H6: Br− | 0.0224 | 0.0278 | −0.0059 | 0.0111 | 0.0288 | 0.0005 |
| BeH2:C6H6:Cl− | 0.0227 | 0.0295 | −0.0060 | 0.0123 | 0.0347 | 0.0007 |
| BeF2:C6H6:Br− | 0.0280 | 0.0860 | −0.0048 | 0.0115 | 0.0299 | 0.0005 |
| BeF2:C6H6:Cl− | 0.0283 | 0.0872 | −0.0048 | 0.0128 | 0.0362 | 0.0007 |
| BeCl2:C6H6 :Br− | 0.0326 | 0.0974 | −0.0065 | 0.0120 | 0.0314 | 0.0005 |
| BeCl2:C6H6:Cl− | 0.0330 | 0.0990 | −0.0070 | 0.0130 | 0.0380 | 0.001 |
| BeH2:C6F6:Br− | 0.0164 | 0.0182 | −0.0041 | 0.0131 | 0.0364 | 0.0011 |
| BeH2:C6F6:Cl− | 0.0169 | 0.0190 | −0.0043 | 0.0146 | 0.0455 | 0.0016 |
| BeF2:C6F6:Br− | 0.0222 | 0.0373 | −0.0060 | 0.0140 | 0.0399 | 0.0012 |
| BeF2:C6F6:Cl− | 0.0226 | 0.0409 | −0.0060 | 0.0155 | 0.0494 | 0.0017 |
| BeCl2:C6F6:Br− | 0.0252 | 0.0336 | −0.0082 | 0.0147 | 0.0421 | 0.0012 |
| BeCl2:C6F6:Cl− | 0.0257 | 0.0377 | −0.0082 | 0.0163 | 0.0524 | 0.0018 |
Charge (e) of the monomers in the ternary complex.
| System | Aromatic | BeR2 | Y− |
|---|---|---|---|
| BeH2:C6H6: Br− | 0.087 | −0.124 | −0.963 |
| BeH2:C6H6:Cl− | 0.088 | −0.126 | −0.962 |
| BeF2:C6H6:Br− | 0.058 | −0.010 | −0.959 |
| BeF2:C6H6:Cl− | 0.059 | −0.101 | −0.958 |
| BeCl2:C6H6 :Br− | 0.115 | −0.161 | −0.953 |
| BeCl2:C6H6:Cl− | 0.117 | −0.163 | −0.953 |
| BeH2:C6F6:Br− | 0.067 | −0.104 | −0.963 |
| BeH2: C6F6:Cl− | 0.070 | −0.107 | −0.962 |
| BeF2: C6F6:Br− | 0.116 | −0.167 | −0.949 |
| BeF2: C6F6:Cl− | 0.120 | −0.172 | −0.948 |
| BeCl2: C6F6:Br− | 0.060 | −0.102 | −0.958 |
| BeCl2: C6F6:Cl− | 0.063 | −0.107 | −0.957 |