Literature DB >> 26032261

Automated pipeline for rapid production and screening of HIV-specific monoclonal antibodies using pichia pastoris.

Kartik A Shah1, John J Clark1, Brittany A Goods1, Timothy J Politano1, Nicholas J Mozdzierz1, Ross M Zimnisky1, Rachel L Leeson1, J Christopher Love2,3, Kerry R Love4,5.   

Abstract

Monoclonal antibodies (mAbs) that bind and neutralize human pathogens have great therapeutic potential. Advances in automated screening and liquid handling have resulted in the ability to discover antigen-specific antibodies either directly from human blood or from various combinatorial libraries (phage, bacteria, or yeast). There remain, however, bottlenecks in the cloning, expression and evaluation of such lead antibodies identified in primary screens that hinder high-throughput screening. As such, "hit-to-lead identification" remains both expensive and time-consuming. By combining the advantages of overlap extension PCR (OE-PCR) and a genetically stable yet easily manipulatable microbial expression host Pichia pastoris, we have developed an automated pipeline for the rapid production and screening of full-length antigen-specific mAbs. Here, we demonstrate the speed, feasibility and cost-effectiveness of our approach by generating several broadly neutralizing antibodies against human immunodeficiency virus (HIV).
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  HIV; OE-PCR; automation; monoclonal antibody

Mesh:

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Year:  2015        PMID: 26032261      PMCID: PMC4754783          DOI: 10.1002/bit.25663

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  23 in total

1.  Coexpression of fungal phytase and xylanase utilizing the cis-acting hydrolase element in Pichia pastoris.

Authors:  Niran Roongsawang; Peerada Promdonkoy; Minradee Wongwanichpokhin; Warasirin Sornlake; Aekkachai Puseenam; Lily Eurwilaichitr; Sutipa Tanapongpipat
Journal:  FEMS Yeast Res       Date:  2010-08-12       Impact factor: 2.796

2.  A high-throughput purification of monoclonal antibodies from glycoengineered Pichia pastoris.

Authors:  Youwei Jiang; Fang Li; Michelle Button; Michael Cukan; Renee Moore; Nathan Sharkey; Huijuan Li
Journal:  Protein Expr Purif       Date:  2010-05-04       Impact factor: 1.650

3.  Aglycosylated immunoglobulin G1 variants productively engage activating Fc receptors.

Authors:  Stephen L Sazinsky; René G Ott; Nathaniel W Silver; Bruce Tidor; Jeffrey V Ravetch; K Dane Wittrup
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-12       Impact factor: 11.205

4.  Fragmentation of a highly purified monoclonal antibody attributed to residual CHO cell protease activity.

Authors:  Sharon X Gao; Ying Zhang; Kensey Stansberry-Perkins; Alex Buko; Shujun Bai; Vanessa Nguyen; Mark L Brader
Journal:  Biotechnol Bioeng       Date:  2010-11-17       Impact factor: 4.530

5.  Stable antibody expression at therapeutic levels using the 2A peptide.

Authors:  Jianmin Fang; Jing-Jing Qian; Saili Yi; Thomas C Harding; Guang Huan Tu; Melinda VanRoey; Karin Jooss
Journal:  Nat Biotechnol       Date:  2005-04-17       Impact factor: 54.908

6.  High-throughput screening and selection of yeast cell lines expressing monoclonal antibodies.

Authors:  Gavin C Barnard; Angela R Kull; Nathan S Sharkey; Seemab S Shaikh; Alissa M Rittenhour; Irina Burnina; Youwei Jiang; Fang Li; Heather Lynaugh; Teresa Mitchell; Juergen H Nett; Adam Nylen; Thomas I Potgieter; Bianka Prinz; Sandra E Rios; Dongxing Zha; Natarajan Sethuraman; Terrance A Stadheim; Piotr Bobrowicz
Journal:  J Ind Microbiol Biotechnol       Date:  2010-08-15       Impact factor: 3.346

7.  Broad diversity of neutralizing antibodies isolated from memory B cells in HIV-infected individuals.

Authors:  Johannes F Scheid; Hugo Mouquet; Niklas Feldhahn; Michael S Seaman; Klara Velinzon; John Pietzsch; Rene G Ott; Robert M Anthony; Henry Zebroski; Arlene Hurley; Adhuna Phogat; Bimal Chakrabarti; Yuxing Li; Mark Connors; Florencia Pereyra; Bruce D Walker; Hedda Wardemann; David Ho; Richard T Wyatt; John R Mascola; Jeffrey V Ravetch; Michel C Nussenzweig
Journal:  Nature       Date:  2009-03-15       Impact factor: 49.962

8.  High-throughput isolation of immunoglobulin genes from single human B cells and expression as monoclonal antibodies.

Authors:  Hua-Xin Liao; Marc C Levesque; Ashleigh Nagel; Ashlyn Dixon; Ruijun Zhang; Emmanuel Walter; Robert Parks; John Whitesides; Dawn J Marshall; Kwan-Ki Hwang; Yi Yang; Xi Chen; Feng Gao; Supriya Munshaw; Thomas B Kepler; Thomas Denny; M Anthony Moody; Barton F Haynes
Journal:  J Virol Methods       Date:  2009-02-21       Impact factor: 2.014

9.  A systematical investigation on the genetic stability of multi-copy Pichia pastoris strains.

Authors:  Taicheng Zhu; Meijin Guo; Chen Sun; Jiangchao Qian; Yingping Zhuang; Ju Chu; Siliang Zhang
Journal:  Biotechnol Lett       Date:  2009-01-19       Impact factor: 2.461

Review 10.  Microbials for the production of monoclonal antibodies and antibody fragments.

Authors:  Oliver Spadiut; Simona Capone; Florian Krainer; Anton Glieder; Christoph Herwig
Journal:  Trends Biotechnol       Date:  2013-10-31       Impact factor: 19.536

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  7 in total

1.  Expression of functional eGFP-fused antigen-binding fragment of ranibizumab in Pichia pastoris.

Authors:  Shirin Movaghar Asareh; Tahereh Savei; Sareh Arjmand; Seyed Omid Ranaei Siadat; Fataneh Fatemi; Mehrab Pourmadadi; Javad Shabani Shayeh
Journal:  Bioimpacts       Date:  2021-10-11

2.  Versatile and on-demand biologics co-production in yeast.

Authors:  Jicong Cao; Pablo Perez-Pinera; Ky Lowenhaupt; Ming-Ru Wu; Oliver Purcell; Cesar de la Fuente-Nunez; Timothy K Lu
Journal:  Nat Commun       Date:  2018-01-08       Impact factor: 14.919

3.  Expressing anti-HIV VRC01 antibody using the murine IgG1 secretion signal in Pichia pastoris.

Authors:  Rochelle Aw; Paul F McKay; Robin J Shattock; Karen M Polizzi
Journal:  AMB Express       Date:  2017-03-24       Impact factor: 3.298

Review 4.  Evolving trends in mAb production processes.

Authors:  Abhinav A Shukla; Leslie S Wolfe; Sigma S Mostafa; Carnley Norman
Journal:  Bioeng Transl Med       Date:  2017-04-03

5.  Challenging the workhorse: Comparative analysis of eukaryotic micro-organisms for expressing monoclonal antibodies.

Authors:  Hanxiao Jiang; Andrew A Horwitz; Chapman Wright; Anna Tai; Elizabeth A Znameroski; Yoseph Tsegaye; Hailley Warbington; Benjamin S Bower; Christina Alves; Carl Co; Kanvasri Jonnalagadda; Darren Platt; Jessica M Walter; Venkatesh Natarajan; Jeffrey A Ubersax; Joel R Cherry; J Christopher Love
Journal:  Biotechnol Bioeng       Date:  2019-03-07       Impact factor: 4.530

6.  A systematic analysis of the expression of the anti-HIV VRC01 antibody in Pichia pastoris through signal peptide optimization.

Authors:  Rochelle Aw; Paul F McKay; Robin J Shattock; Karen M Polizzi
Journal:  Protein Expr Purif       Date:  2018-03-27       Impact factor: 1.650

7.  A streamlined cloning workflow minimising the time-to-strain pipeline for Pichia pastoris.

Authors:  Kate E Royle; Karen Polizzi
Journal:  Sci Rep       Date:  2017-11-17       Impact factor: 4.379

  7 in total

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