Literature DB >> 26028800

Scalable Brain Network Construction on White Matter Fibers.

Moo K Chung1, Nagesh Adluru2, Kim M Dalton2, Andrew L Alexander3, Richard J Davidson4.   

Abstract

DTI offers a unique opportunity to characterize the structural connectivity of the human brain non-invasively by tracing white matter fiber tracts. Whole brain tractography studies routinely generate up to half million tracts per brain, which serves as edges in an extremely large 3D graph with up to half million edges. Currently there is no agreed-upon method for constructing the brain structural network graphs out of large number of white matter tracts. In this paper, we present a scalable iterative framework called the ε-neighbor method for building a network graph and apply it to testing abnormal connectivity in autism.

Entities:  

Year:  2011        PMID: 26028800      PMCID: PMC4447194          DOI: 10.1117/12.874245

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  12 in total

1.  Optimal imaging parameters for fiber-orientation estimation in diffusion MRI.

Authors:  Daniel C Alexander; Gareth J Barker
Journal:  Neuroimage       Date:  2005-08-15       Impact factor: 6.556

2.  High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences: an example study using amyotrophic lateral sclerosis.

Authors:  Hui Zhang; Brian B Avants; Paul A Yushkevich; John H Woo; Sumei Wang; Leo F McCluskey; Lauren B Elman; Elias R Melhem; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

3.  Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diffusion tensor imaging tractography.

Authors:  Gaolang Gong; Yong He; Luis Concha; Catherine Lebel; Donald W Gross; Alan C Evans; Christian Beaulieu
Journal:  Cereb Cortex       Date:  2008-06-20       Impact factor: 5.357

4.  Correction for geometric distortion in echo planar images from B0 field variations.

Authors:  P Jezzard; R S Balaban
Journal:  Magn Reson Med       Date:  1995-07       Impact factor: 4.668

5.  Automated image registration: I. General methods and intrasubject, intramodality validation.

Authors:  R P Woods; S T Grafton; C J Holmes; S R Cherry; J C Mazziotta
Journal:  J Comput Assist Tomogr       Date:  1998 Jan-Feb       Impact factor: 1.826

6.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

7.  Network scaling effects in graph analytic studies of human resting-state FMRI data.

Authors:  Alex Fornito; Andrew Zalesky; Edward T Bullmore
Journal:  Front Syst Neurosci       Date:  2010-06-17

8.  Autism Diagnostic Interview-Revised: a revised version of a diagnostic interview for caregivers of individuals with possible pervasive developmental disorders.

Authors:  C Lord; M Rutter; A Le Couteur
Journal:  J Autism Dev Disord       Date:  1994-10

9.  White matter tractography using diffusion tensor deflection.

Authors:  Mariana Lazar; David M Weinstein; Jay S Tsuruda; Khader M Hasan; Konstantinos Arfanakis; M Elizabeth Meyerand; Benham Badie; Howard A Rowley; Victor Haughton; Aaron Field; Andrew L Alexander
Journal:  Hum Brain Mapp       Date:  2003-04       Impact factor: 5.038

10.  Mapping human whole-brain structural networks with diffusion MRI.

Authors:  Patric Hagmann; Maciej Kurant; Xavier Gigandet; Patrick Thiran; Van J Wedeen; Reto Meuli; Jean-Philippe Thiran
Journal:  PLoS One       Date:  2007-07-04       Impact factor: 3.240

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  7 in total

1.  STRUCTURAL CONNECTIVITY VIA THE TENSOR-BASED MORPHOMETRY.

Authors:  Seung-Goo Kim; Moo K Chung; Jamie L Hanson; Brian B Avants; James C Gee; Richard J Davidson; Seth D Pollak
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2011

2.  Persistent Homology in Sparse Regression and Its Application to Brain Morphometry.

Authors:  Moo K Chung; Jamie L Hanson; Jieping Ye; Richard J Davidson; Seth D Pollak
Journal:  IEEE Trans Med Imaging       Date:  2015-03-24       Impact factor: 10.048

Review 3.  Characterization of cerebral white matter properties using quantitative magnetic resonance imaging stains.

Authors:  Andrew L Alexander; Samuel A Hurley; Alexey A Samsonov; Nagesh Adluru; Ameer Pasha Hosseinbor; Pouria Mossahebi; Do P M Tromp; Elizabeth Zakszewski; Aaron S Field
Journal:  Brain Connect       Date:  2012-01-27

4.  Applications of Epsilon Radial Networks in Neuroimage Analyses.

Authors:  Nagesh Adluru; Moo K Chung; Nicholas T Lange; Janet E Lainhart; Andrew L Alexander
Journal:  Adv Image Video Technol       Date:  2011

5.  Effects of DTI spatial normalization on white matter tract reconstructions.

Authors:  Nagesh Adluru; Hui Zhang; Do P M Tromp; Andrew L Alexander
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-13

6.  Topological Properties of the Structural Brain Network in Autism via ϵ-Neighbor Method.

Authors:  Min-Hee Lee; Dong Youn Kim; Moo K Chung; Andrew L Alexander; Richard J Davidson
Journal:  IEEE Trans Biomed Eng       Date:  2018-01-15       Impact factor: 4.538

7.  Exact topological inference of the resting-state brain networks in twins.

Authors:  Moo K Chung; Hyekyoung Lee; Alex DiChristofano; Hernando Ombao; Victor Solo
Journal:  Netw Neurosci       Date:  2019-07-01
  7 in total

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