Literature DB >> 26028771

Detection of poultry meat specific bacteria using FTIR spectroscopy and chemometrics.

Manpreet Kaur Grewal1, Pranita Jaiswal1, S N Jha1.   

Abstract

FTIR spectra of poultry meat specific bacteria viz. Salmonella enteritidis, Pseudomonas ludensis, Listeria monocytogenes and Escherichia coli were collected and investigated for identification of spectral windows capable of bacterial classification and quantification. Two separate datasets obtained at different times were used in the study to check reproducibility of results. Multivariate data analysis techniques viz. principal component analysis (PCA), partial least-squares discriminant analysis (PLSDA) and soft independent modelling of class analogy (SIMCA) were used in the analysis. Using full cross-validation and separate calibration and prediction datasets, the highest correct classification results for SIMCA and PLSDA were achieved in spectral window (1800-1200 cm-1) for both datasets. The window was also tested then for quantification of different bacteria and it had been observed that PLS models had better R values for classification (R = 0.984) than predicting various concentration levels (R = 0.939) of all four poultry specific bacteria inoculated in distilled water. The identified spectral window 1800-1200 cm-1 also demonstrated potential for 100% correct classification of chicken salami samples contaminated with S. enteritidis and P. ludensis from control using SIMCA. However, this wavenumber range yielded few misclassifications using PLS-DA approach. Thus FTIR spectroscopy in combination with chemometrics is a powerful technique that can be developed further to differentiate bacteria directly on poultry meat surface.

Entities:  

Keywords:  Bacteria detection; FTIR; PLSDA; Poultry meat; SIMCA

Year:  2014        PMID: 26028771      PMCID: PMC4444886          DOI: 10.1007/s13197-014-1457-9

Source DB:  PubMed          Journal:  J Food Sci Technol        ISSN: 0022-1155            Impact factor:   2.701


  14 in total

1.  Rapid and quantitative detection of the microbial spoilage of meat by fourier transform infrared spectroscopy and machine learning.

Authors:  David I Ellis; David Broadhurst; Douglas B Kell; Jem J Rowland; Royston Goodacre
Journal:  Appl Environ Microbiol       Date:  2002-06       Impact factor: 4.792

Review 2.  Identification of medically relevant microorganisms by vibrational spectroscopy.

Authors:  K Maquelin; C Kirschner; L-P Choo-Smith; N van den Braak; H Ph Endtz; D Naumann; G J Puppels
Journal:  J Microbiol Methods       Date:  2002-11       Impact factor: 2.363

3.  Rapid and reliable identification of food-borne yeasts by Fourier-transform infrared spectroscopy.

Authors:  M Kümmerle; S Scherer; H Seiler
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

4.  Rapid detection and identification of Pseudomonas aeruginosa and Escherichia coli as pure and mixed cultures in bottled drinking water using fourier transform infrared spectroscopy and multivariate analysis.

Authors:  Hamzah M Al-Qadiri; Murad A Al-Holy; Mengshi Lin; Nivin I Alami; Anna G Cavinato; Barbara A Rasco
Journal:  J Agric Food Chem       Date:  2006-08-09       Impact factor: 5.279

5.  Grouping of oral streptococcal species using Fourier-transform infrared spectroscopy in comparison with classical microbiological identification.

Authors:  H C van der Mei; D Naumann; H J Busscher
Journal:  Arch Oral Biol       Date:  1993-11       Impact factor: 2.633

6.  Classification and identification of bacteria by Fourier-transform infrared spectroscopy.

Authors:  D Helm; H Labischinski; G Schallehn; D Naumann
Journal:  J Gen Microbiol       Date:  1991-01

7.  Use of Fourier transform infrared spectroscopy to evaluate the proteolytic activity of Yarrowia lipolytica and its contribution to cheese ripening.

Authors:  V Lucia; B Daniela; L Rosalba
Journal:  Int J Food Microbiol       Date:  2001-09-19       Impact factor: 5.277

8.  Identification of species of Brucella using Fourier transform infrared spectroscopy.

Authors:  M A Miguel Gómez; M A Bratos Pérez; F J Martín Gil; A Dueñas Díez; J F Martín Rodríguez; P Gutiérrez Rodríguez; A Orduña Domingo; A Rodríguez Torres
Journal:  J Microbiol Methods       Date:  2003-10       Impact factor: 2.363

9.  Detection and identification of bacteria in an isolated system with near-infrared spectroscopy and multivariate analysis.

Authors:  Dimitris Alexandrakis; Gerard Downey; Amalia G M Scannell
Journal:  J Agric Food Chem       Date:  2008-04-24       Impact factor: 5.279

10.  Simultaneous infections with different serogroups of Legionella pneumophila investigated by routine methods and Fourier transform infrared spectroscopy.

Authors:  I Horbach; D Naumann; F J Fehrenbach
Journal:  J Clin Microbiol       Date:  1988-06       Impact factor: 5.948

View more
  3 in total

1.  Assessing the capability of Fourier transform infrared spectroscopy in tandem with chemometric analysis for predicting poultry meat spoilage.

Authors:  Ubaid Ur Rahman; Amna Sahar; Imran Pasha; Sajjad Ur Rahman; Anum Ishaq
Journal:  PeerJ       Date:  2018-08-06       Impact factor: 2.984

2.  Isolation and characterization of fast-growing green snow bacteria from coastal East Antarctica.

Authors:  Margarita Smirnova; Uladzislau Miamin; Achim Kohler; Leonid Valentovich; Artur Akhremchuk; Anastasiya Sidarenka; Andrey Dolgikh; Volha Shapaval
Journal:  Microbiologyopen       Date:  2020-12-29       Impact factor: 3.904

3.  Rapid Microbial Quality Assessment of Chicken Liver Inoculated or Not With Salmonella Using FTIR Spectroscopy and Machine Learning.

Authors:  Dimitra Dourou; Athena Grounta; Anthoula A Argyri; George Froutis; Panagiotis Tsakanikas; George-John E Nychas; Agapi I Doulgeraki; Nikos G Chorianopoulos; Chrysoula C Tassou
Journal:  Front Microbiol       Date:  2021-02-04       Impact factor: 5.640

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.